RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 RHOQP17081 205 aa8.42□□□□□ -1.06
GDE1-204ENST00000569773 PHKA2P46019 1235 aa8.42□□□□□ -1.06
GDE1-204ENST00000569773 POU4F2Q12837 409 aa8.42□□□□□ -1.06
GDE1-204ENST00000569773 SH3PXD2AQ5TCZ1 1133 aa8.42□□□□□ -1.06
GDE1-204ENST00000569773 ZDHHC1Q8WTX9 485 aa8.42□□□□□ -1.06
GDE1-204ENST00000569773 METP08581 1390 aa8.42□□□□□ -1.06
GDE1-204ENST00000569773 JCADQ9P266 1359 aa8.42□□□□□ -1.06
GDE1-204ENST00000569773 ASXL1Q8IXJ9 1541 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 HFM1A2PYH4 1435 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 MST1RQ04912 1400 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 PRAG1Q86YV5 1406 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 SOBPA7XYQ1 873 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 SPATA31C2B4DYI2 1134 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 NOS2P35228 1153 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 ITGAEP38570 1179 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 PLA2G4AP47712 749 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 TEAD4Q15561 434 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 NBPF10Q6P3W6 841 aaKnown RBP8.41□□□□□ -1.06
GDE1-204ENST00000569773 TREML4Q6UXN2 200 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 CAPN12Q6ZSI9 719 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 KCTD17Q8N5Z5 321 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 C1orf216Q8TAB5 229 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 L3MBTL2Q969R5 705 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 C2orf49Q9BVC5 232 aaPredicted RBP8.41□□□□□ -1.06
GDE1-204ENST00000569773 C19orf44Q9H6X5 657 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 GMPR2Q9P2T1 348 aaKnown RBP8.41□□□□□ -1.06
GDE1-204ENST00000569773 ZNF232Q9UNY5 417 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 AMOTL2Q9Y2J4 779 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 CHMP3Q9Y3E7 222 aa8.41□□□□□ -1.06
GDE1-204ENST00000569773 EP400Q96L91 3159 aa8.4□□□□□ -1.06
GDE1-204ENST00000569773 SERTM1A2A2V5 107 aa8.4□□□□□ -1.06
GDE1-204ENST00000569773 EML1O00423 815 aa8.4□□□□□ -1.06
GDE1-204ENST00000569773 MAN1A2O60476 641 aa8.4□□□□□ -1.06
GDE1-204ENST00000569773 TAS1R3Q7RTX0 852 aa8.4□□□□□ -1.06
GDE1-204ENST00000569773 VTI1AQ96AJ9 217 aa8.4□□□□□ -1.06
GDE1-204ENST00000569773 ADGRL3Q9HAR2 1447 aa8.39□□□□□ -1.07
GDE1-204ENST00000569773 BRINP3Q76B58 766 aa8.39□□□□□ -1.07
GDE1-204ENST00000569773 STAG2Q8N3U4 1231 aa8.39□□□□□ -1.07
GDE1-204ENST00000569773 SENP2Q9HC62 589 aa8.39□□□□□ -1.07
GDE1-204ENST00000569773 SETD5Q9C0A6 1442 aa8.38□□□□□ -1.07
GDE1-204ENST00000569773 KCNA1Q09470 495 aa8.38□□□□□ -1.07
GDE1-204ENST00000569773 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.38□□□□□ -1.07
GDE1-204ENST00000569773 AIDAQ96BJ3 306 aa8.38□□□□□ -1.07
GDE1-204ENST00000569773 TRIM47Q96LD4 638 aa8.38□□□□□ -1.07
GDE1-204ENST00000569773 SEPT3Q9UH03 358 aa8.38□□□□□ -1.07
GDE1-204ENST00000569773 HCN4Q9Y3Q4 1203 aa8.38□□□□□ -1.07
GDE1-204ENST00000569773 PTCH1Q13635 1447 aa8.37□□□□□ -1.07
GDE1-204ENST00000569773 SPATA31A6Q5VVP1 1343 aa8.37□□□□□ -1.07
GDE1-204ENST00000569773 ARID4AP29374 1257 aaPredicted RBP8.37□□□□□ -1.07
GDE1-204ENST00000569773 TXLNAP40222 546 aa8.37□□□□□ -1.07
GDE1-204ENST00000569773 NAA30Q147X3 362 aaPredicted RBP8.37□□□□□ -1.07
GDE1-204ENST00000569773 KIFC2Q96AC6 838 aa8.37□□□□□ -1.07
GDE1-204ENST00000569773 NGLY1Q96IV0 654 aa8.37□□□□□ -1.07
GDE1-204ENST00000569773 PTCD1O75127 700 aaKnown RBP8.36□□□□□ -1.07
GDE1-204ENST00000569773 SNRPBP14678 240 aaKnown RBP8.36□□□□□ -1.07
GDE1-204ENST00000569773 ATF3P18847 181 aa8.36□□□□□ -1.07
GDE1-204ENST00000569773 HIRAP54198 1017 aaPredicted RBP8.36□□□□□ -1.07
GDE1-204ENST00000569773 WDR44Q5JSH3 913 aa8.36□□□□□ -1.07
GDE1-204ENST00000569773 ALDH16A1Q8IZ83 802 aa8.36□□□□□ -1.07
GDE1-204ENST00000569773 TIMMDC1Q9NPL8 285 aa8.36□□□□□ -1.07
GDE1-204ENST00000569773 IVNS1ABPQ9Y6Y0 642 aa8.36□□□□□ -1.07
GDE1-204ENST00000569773 KNDC1Q76NI1 1749 aa8.36□□□□□ -1.07
GDE1-204ENST00000569773 MARF1Q9Y4F3 1742 aaKnown RBP8.35□□□□□ -1.07
GDE1-204ENST00000569773 POTECB2RU33 542 aa8.35□□□□□ -1.07
GDE1-204ENST00000569773 SERPINB4P48594 390 aa8.35□□□□□ -1.07
GDE1-204ENST00000569773 TRIM26Q12899 539 aaPredicted RBP8.35□□□□□ -1.07
GDE1-204ENST00000569773 NBPF1Q3BBV0 1214 aa8.35□□□□□ -1.07
GDE1-204ENST00000569773 CCER1Q8TC90 406 aaPredicted RBP8.35□□□□□ -1.07
GDE1-204ENST00000569773 COL26A1Q96A83 441 aa8.35□□□□□ -1.07
GDE1-204ENST00000569773 PHACTR1Q9C0D0 580 aa8.35□□□□□ -1.07
GDE1-204ENST00000569773 MTMR7Q9Y216 660 aa8.35□□□□□ -1.07
GDE1-204ENST00000569773 COL22A1Q8NFW1 1626 aaPredicted RBP8.35□□□□□ -1.07
GDE1-204ENST00000569773 SPATA31E1Q6ZUB1 1445 aa8.35□□□□□ -1.07
GDE1-204ENST00000569773 ROBO2Q9HCK4 1378 aa8.35□□□□□ -1.07
GDE1-204ENST00000569773 C1orf167Q5SNV9 1468 aa8.34□□□□□ -1.07
GDE1-204ENST00000569773 PATL2C9JE40 543 aaKnown RBP8.34□□□□□ -1.07
GDE1-204ENST00000569773 C11orf95C9JLR9 678 aaPredicted RBP8.34□□□□□ -1.07
GDE1-204ENST00000569773 ZNF326Q5BKZ1 582 aaKnown RBP8.34□□□□□ -1.07
GDE1-204ENST00000569773 SAP130Q9H0E3 1048 aa8.34□□□□□ -1.07
GDE1-204ENST00000569773 QTRT2Q9H974 415 aaKnown RBP8.34□□□□□ -1.07
GDE1-204ENST00000569773 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.34□□□□□ -1.07
GDE1-204ENST00000569773 CDC42BPGQ6DT37 1551 aa8.34□□□□□ -1.07
GDE1-204ENST00000569773 RGPD8O14715 1765 aaPredicted RBP8.33□□□□□ -1.08
GDE1-204ENST00000569773 SENP3-EIF4A1A0A087X0R7 540 aa8.33□□□□□ -1.08
GDE1-204ENST00000569773 A0A1B0GTH6 734 aa8.33□□□□□ -1.08
GDE1-204ENST00000569773 ZBTB7CA1YPR0 619 aa8.33□□□□□ -1.08
GDE1-204ENST00000569773 ABL1P00519 1130 aa8.33□□□□□ -1.08
GDE1-204ENST00000569773 ATP4AP20648 1035 aa8.33□□□□□ -1.08
GDE1-204ENST00000569773 PTSQ03393 145 aa8.33□□□□□ -1.08
GDE1-204ENST00000569773 GTF3C2Q8WUA4 911 aaPredicted RBP8.33□□□□□ -1.08
GDE1-204ENST00000569773 GPAMQ9HCL2 828 aa8.33□□□□□ -1.08
GDE1-204ENST00000569773 ZDHHC3Q9NYG2 299 aa8.33□□□□□ -1.08
GDE1-204ENST00000569773 GNEQ9Y223 722 aaKnown RBP8.33□□□□□ -1.08
GDE1-204ENST00000569773 PNPLA6Q8IY17 1366 aa8.33□□□□□ -1.08
GDE1-204ENST00000569773 CDK12Q9NYV4 1490 aaPredicted RBP8.32□□□□□ -1.08
GDE1-204ENST00000569773 RPGRIP1LQ68CZ1 1315 aa8.32□□□□□ -1.08
GDE1-204ENST00000569773 FMN2Q9NZ56 1722 aa8.32□□□□□ -1.08
GDE1-204ENST00000569773 TECPR2O15040 1411 aa8.32□□□□□ -1.08
GDE1-204ENST00000569773 TATP17735 454 aaPredicted RBP8.32□□□□□ -1.08
GDE1-204ENST00000569773 MSX1P28360 303 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms