RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 APLP1P51693 650 aa11.91□□□□□ -0.5
CAPN3-219ENST00000569136 PDZRN3Q9UPQ7 1066 aa11.91□□□□□ -0.5
CAPN3-219ENST00000569136 POLRMTO00411 1230 aaKnown RBP11.9□□□□□ -0.5
CAPN3-219ENST00000569136 KDM4AO75164 1064 aa11.9□□□□□ -0.5
CAPN3-219ENST00000569136 CAMTA2O94983 1202 aa11.9□□□□□ -0.5
CAPN3-219ENST00000569136 SERPINB2P05120 415 aa11.9□□□□□ -0.5
CAPN3-219ENST00000569136 EIF2S2P20042 333 aaKnown RBP11.9□□□□□ -0.5
CAPN3-219ENST00000569136 NLGN2Q8NFZ4 835 aa11.9□□□□□ -0.5
CAPN3-219ENST00000569136 CCER2I3L3R5 266 aa11.89□□□□□ -0.51
CAPN3-219ENST00000569136 DDR1Q08345 913 aa11.89□□□□□ -0.51
CAPN3-219ENST00000569136 KIF6Q6ZMV9 814 aa11.89□□□□□ -0.51
CAPN3-219ENST00000569136 WDR63Q8IWG1 891 aa11.89□□□□□ -0.51
CAPN3-219ENST00000569136 WWC1Q8IX03 1113 aa11.89□□□□□ -0.51
CAPN3-219ENST00000569136 FAM9BQ8IZU0 186 aa11.89□□□□□ -0.51
CAPN3-219ENST00000569136 C5P01031 1676 aa11.89□□□□□ -0.51
CAPN3-219ENST00000569136 IL16Q14005 1332 aa11.88□□□□□ -0.51
CAPN3-219ENST00000569136 FUT2Q10981 343 aa11.88□□□□□ -0.51
CAPN3-219ENST00000569136 TPTE2Q6XPS3 522 aa11.88□□□□□ -0.51
CAPN3-219ENST00000569136 BICDL1Q6ZP65 573 aa11.88□□□□□ -0.51
CAPN3-219ENST00000569136 NYAP1Q6ZVC0 841 aa11.88□□□□□ -0.51
CAPN3-219ENST00000569136 TBC1D2Q9BYX2 928 aa11.88□□□□□ -0.51
CAPN3-219ENST00000569136 MBIPQ9NS73 344 aa11.88□□□□□ -0.51
CAPN3-219ENST00000569136 A0A0G2JLW4 131 aa11.87□□□□□ -0.51
CAPN3-219ENST00000569136 ACTN4O43707 911 aaKnown RBP11.87□□□□□ -0.51
CAPN3-219ENST00000569136 PIP4K2AP48426 406 aaPredicted RBP11.87□□□□□ -0.51
CAPN3-219ENST00000569136 GRIPAP1Q4V328 841 aa11.87□□□□□ -0.51
CAPN3-219ENST00000569136 DUSP27Q5VZP5 1158 aa11.87□□□□□ -0.51
CAPN3-219ENST00000569136 TBC1D9BQ66K14 1250 aa11.87□□□□□ -0.51
CAPN3-219ENST00000569136 SPIRE2Q8WWL2 714 aa11.87□□□□□ -0.51
CAPN3-219ENST00000569136 BRIP1Q9BX63 1249 aa11.87□□□□□ -0.51
CAPN3-219ENST00000569136 DDX21Q9NR30 783 aaKnown RBP eCLIP11.87□□□□□ -0.51
CAPN3-219ENST00000569136 PIM2Q9P1W9 311 aa11.87□□□□□ -0.51
CAPN3-219ENST00000569136 PCDHB3Q9Y5E6 796 aa11.87□□□□□ -0.51
CAPN3-219ENST00000569136 QSER1Q2KHR3 1735 aa11.86□□□□□ -0.51
CAPN3-219ENST00000569136 NPHP1O15259 732 aa11.86□□□□□ -0.51
CAPN3-219ENST00000569136 MYL6BP14649 208 aa11.86□□□□□ -0.51
CAPN3-219ENST00000569136 DPEP1P16444 411 aa11.86□□□□□ -0.51
CAPN3-219ENST00000569136 PDE6BP35913 854 aa11.86□□□□□ -0.51
CAPN3-219ENST00000569136 DIXDC1Q155Q3 683 aa11.86□□□□□ -0.51
CAPN3-219ENST00000569136 PUS10Q3MIT2 529 aaKnown RBP11.86□□□□□ -0.51
CAPN3-219ENST00000569136 PLSCR2Q9NRY7 297 aa11.86□□□□□ -0.51
CAPN3-219ENST00000569136 HYPKQ9NX55 129 aa11.86□□□□□ -0.51
CAPN3-219ENST00000569136 DBF4Q9UBU7 674 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-219ENST00000569136 MAP3K15Q6ZN16 1313 aa11.86□□□□□ -0.51
CAPN3-219ENST00000569136 H0YIN7 160 aa11.85□□□□□ -0.51
CAPN3-219ENST00000569136 HDGFL1Q5TGJ6 251 aa11.85□□□□□ -0.51
CAPN3-219ENST00000569136 NBPF5PQ86XG9 351 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-219ENST00000569136 NIP7Q9Y221 180 aaKnown RBP eCLIP11.85□□□□□ -0.51
CAPN3-219ENST00000569136 TAF1LQ8IZX4 1826 aa11.85□□□□□ -0.51
CAPN3-219ENST00000569136 MYH14Q7Z406 1995 aaKnown RBP11.85□□□□□ -0.51
CAPN3-219ENST00000569136 KCNA3P22001 575 aa11.84□□□□□ -0.51
CAPN3-219ENST00000569136 YY1P25490 414 aa11.84□□□□□ -0.51
CAPN3-219ENST00000569136 COPS2P61201 443 aa11.84□□□□□ -0.51
CAPN3-219ENST00000569136 USP46P62068 366 aa11.84□□□□□ -0.51
CAPN3-219ENST00000569136 ST5P78524 1137 aa11.84□□□□□ -0.51
CAPN3-219ENST00000569136 HSP90AB3PQ58FF7 597 aa11.84□□□□□ -0.51
CAPN3-219ENST00000569136 DALRD3Q5D0E6 543 aaKnown RBP11.84□□□□□ -0.51
CAPN3-219ENST00000569136 CCDC30Q5VVM6 783 aa11.84□□□□□ -0.51
CAPN3-219ENST00000569136 DIEXFQ68CQ4 756 aaKnown RBP11.84□□□□□ -0.51
CAPN3-219ENST00000569136 COPS6Q7L5N1 327 aa11.84□□□□□ -0.51
CAPN3-219ENST00000569136 CNBD1Q8NA66 436 aa11.84□□□□□ -0.51
CAPN3-219ENST00000569136 NYXQ9GZU5 481 aa11.84□□□□□ -0.51
CAPN3-219ENST00000569136 UBR3Q6ZT12 1888 aa11.83□□□□□ -0.52
CAPN3-219ENST00000569136 CARMIL3Q8ND23 1372 aa11.83□□□□□ -0.52
CAPN3-219ENST00000569136 YBX3P16989 372 aaKnown RBP eCLIP11.83□□□□□ -0.52
CAPN3-219ENST00000569136 GTF2E1P29083 439 aaPredicted RBP11.83□□□□□ -0.52
CAPN3-219ENST00000569136 HLFQ16534 295 aa11.83□□□□□ -0.52
CAPN3-219ENST00000569136 KRT24Q2M2I5 525 aa11.83□□□□□ -0.52
CAPN3-219ENST00000569136 PARP10Q53GL7 1025 aa11.83□□□□□ -0.52
CAPN3-219ENST00000569136 TTLL7Q6ZT98 887 aa11.83□□□□□ -0.52
CAPN3-219ENST00000569136 LRP10Q7Z4F1 713 aa11.83□□□□□ -0.52
CAPN3-219ENST00000569136 MYH16Q9H6N6 1097 aa11.83□□□□□ -0.52
CAPN3-219ENST00000569136 POLR3EQ9NVU0 708 aa11.83□□□□□ -0.52
CAPN3-219ENST00000569136 CICQ96RK0 1608 aaPredicted RBP11.82□□□□□ -0.52
CAPN3-219ENST00000569136 ELL2O00472 640 aaPredicted RBP11.82□□□□□ -0.52
CAPN3-219ENST00000569136 PRR5LQ6MZQ0 368 aa11.82□□□□□ -0.52
CAPN3-219ENST00000569136 C2CD5Q86YS7 1000 aa11.82□□□□□ -0.52
CAPN3-219ENST00000569136 ZNF34Q8IZ26 560 aa11.82□□□□□ -0.52
CAPN3-219ENST00000569136 TTLL6Q8N841 843 aa11.82□□□□□ -0.52
CAPN3-219ENST00000569136 C8orf58Q8NAV2 365 aa11.82□□□□□ -0.52
CAPN3-219ENST00000569136 XAGE3Q8WTP9 111 aa11.82□□□□□ -0.52
CAPN3-219ENST00000569136 BCS1LQ9Y276 419 aa11.82□□□□□ -0.52
CAPN3-219ENST00000569136 SALL2Q9Y467 1007 aaPredicted RBP11.82□□□□□ -0.52
CAPN3-219ENST00000569136 C10orf71Q711Q0 1435 aa11.81□□□□□ -0.52
CAPN3-219ENST00000569136 MOXD2PA6NHM9 499 aa11.81□□□□□ -0.52
CAPN3-219ENST00000569136 HOXA2O43364 376 aa11.81□□□□□ -0.52
CAPN3-219ENST00000569136 NDUFV2P19404 249 aa11.81□□□□□ -0.52
CAPN3-219ENST00000569136 AIMP1Q12904 312 aaKnown RBP11.81□□□□□ -0.52
CAPN3-219ENST00000569136 PROSER3Q2NL68 480 aa11.81□□□□□ -0.52
CAPN3-219ENST00000569136 MYSM1Q5VVJ2 828 aa11.81□□□□□ -0.52
CAPN3-219ENST00000569136 BLOC1S3Q6QNY0 202 aa11.81□□□□□ -0.52
CAPN3-219ENST00000569136 PPP1R42Q7Z4L9 355 aa11.81□□□□□ -0.52
CAPN3-219ENST00000569136 PLBD2Q8NHP8 589 aa11.81□□□□□ -0.52
CAPN3-219ENST00000569136 HLA-CQ95604 372 aa11.81□□□□□ -0.52
CAPN3-219ENST00000569136 CNKSR1Q969H4 720 aa11.81□□□□□ -0.52
CAPN3-219ENST00000569136 ZBTB3Q9H5J0 574 aa11.81□□□□□ -0.52
CAPN3-219ENST00000569136 CHPF2Q9P2E5 772 aa11.81□□□□□ -0.52
CAPN3-219ENST00000569136 KLRG2A4D1S0 409 aaPredicted RBP11.8□□□□□ -0.52
CAPN3-219ENST00000569136 CHRNA5P30532 468 aa11.8□□□□□ -0.52
CAPN3-219ENST00000569136 GUCA2AQ02747 115 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms