RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 CCDC116Q8IYX3 515 aa8.17□□□□□ -1.1
CDH13-211ENST00000568770 WDR17Q8IZU2 1322 aa8.17□□□□□ -1.1
CDH13-211ENST00000568770 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.16□□□□□ -1.1
CDH13-211ENST00000568770 USP17L3A6NCW0 530 aa8.16□□□□□ -1.1
CDH13-211ENST00000568770 USP17L4A6NCW7 530 aa8.16□□□□□ -1.1
CDH13-211ENST00000568770 LILRA1O75019 489 aa8.16□□□□□ -1.1
CDH13-211ENST00000568770 LTN1O94822 1766 aa8.16□□□□□ -1.1
CDH13-211ENST00000568770 ADD1P35611 737 aaKnown RBP8.16□□□□□ -1.1
CDH13-211ENST00000568770 OXLD1Q5BKU9 147 aa8.16□□□□□ -1.1
CDH13-211ENST00000568770 USP17L2Q6R6M4 530 aa8.16□□□□□ -1.1
CDH13-211ENST00000568770 USP17L1Q7RTZ2 530 aa8.16□□□□□ -1.1
CDH13-211ENST00000568770 TRPM1Q7Z4N2 1603 aa8.16□□□□□ -1.1
CDH13-211ENST00000568770 ARXQ96QS3 562 aa8.16□□□□□ -1.1
CDH13-211ENST00000568770 DOLKQ9UPQ8 538 aa8.16□□□□□ -1.1
CDH13-211ENST00000568770 USP6P35125 1406 aa8.15□□□□□ -1.1
CDH13-211ENST00000568770 CPSF1Q10570 1443 aaKnown RBP8.15□□□□□ -1.1
CDH13-211ENST00000568770 BRD4O60885 1362 aaPredicted RBP8.15□□□□□ -1.1
CDH13-211ENST00000568770 MAP3K5Q99683 1374 aa8.15□□□□□ -1.1
CDH13-211ENST00000568770 RAB3GAP2Q9H2M9 1393 aa8.15□□□□□ -1.1
CDH13-211ENST00000568770 EXOC5O00471 708 aa8.15□□□□□ -1.1
CDH13-211ENST00000568770 GFRA3O60609 400 aa8.15□□□□□ -1.1
CDH13-211ENST00000568770 GPR162Q16538 588 aa8.15□□□□□ -1.1
CDH13-211ENST00000568770 ITPKCQ96DU7 683 aa8.15□□□□□ -1.1
CDH13-211ENST00000568770 ZFAND3Q9H8U3 227 aa8.15□□□□□ -1.1
CDH13-211ENST00000568770 CYLDQ9NQC7 956 aa8.15□□□□□ -1.1
CDH13-211ENST00000568770 MAP7D1Q3KQU3 841 aa8.14□□□□□ -1.11
CDH13-211ENST00000568770 PLEKHM2Q8IWE5 1019 aa8.14□□□□□ -1.11
CDH13-211ENST00000568770 CARD10Q9BWT7 1032 aa8.14□□□□□ -1.11
CDH13-211ENST00000568770 ABCC6O95255 1503 aa8.13□□□□□ -1.11
CDH13-211ENST00000568770 TNS2Q63HR2 1409 aa8.13□□□□□ -1.11
CDH13-211ENST00000568770 CSB-PGBD3P0DP91 1061 aa8.13□□□□□ -1.11
CDH13-211ENST00000568770 TIMP2P16035 220 aa8.13□□□□□ -1.11
CDH13-211ENST00000568770 WDR4P57081 412 aaKnown RBP8.13□□□□□ -1.11
CDH13-211ENST00000568770 CBLBQ13191 982 aa8.13□□□□□ -1.11
CDH13-211ENST00000568770 ARHGEF25Q86VW2 580 aa8.13□□□□□ -1.11
CDH13-211ENST00000568770 ACSBG1Q96GR2 724 aa8.13□□□□□ -1.11
CDH13-211ENST00000568770 CABP1Q9NZU7 370 aa8.13□□□□□ -1.11
CDH13-211ENST00000568770 MKRN1Q9UHC7 482 aaKnown RBP8.13□□□□□ -1.11
CDH13-211ENST00000568770 FAM187AA6NFU0 413 aa8.12□□□□□ -1.11
CDH13-211ENST00000568770 ZIC2O95409 532 aaPredicted RBP8.12□□□□□ -1.11
CDH13-211ENST00000568770 ERVK-9P63128 1117 aa8.12□□□□□ -1.11
CDH13-211ENST00000568770 DHX9Q08211 1270 aaKnown RBP8.12□□□□□ -1.11
CDH13-211ENST00000568770 ZNF827Q17R98 1081 aa8.12□□□□□ -1.11
CDH13-211ENST00000568770 NBPF1Q3BBV0 1214 aa8.12□□□□□ -1.11
CDH13-211ENST00000568770 OSBPL3Q9H4L5 887 aa8.12□□□□□ -1.11
CDH13-211ENST00000568770 NFAT5O94916 1531 aa8.12□□□□□ -1.11
CDH13-211ENST00000568770 LY75O60449 1722 aa8.12□□□□□ -1.11
CDH13-211ENST00000568770 CCDC7Q96M83 1385 aa8.11□□□□□ -1.11
CDH13-211ENST00000568770 CENPJQ9HC77 1338 aaPredicted RBP8.11□□□□□ -1.11
CDH13-211ENST00000568770 ZBTB7BO15156 539 aaPredicted RBP8.11□□□□□ -1.11
CDH13-211ENST00000568770 STAU1O95793 577 aaKnown RBP8.11□□□□□ -1.11
CDH13-211ENST00000568770 EML3Q32P44 896 aa8.11□□□□□ -1.11
CDH13-211ENST00000568770 KDF1Q8NAX2 398 aaPredicted RBP8.11□□□□□ -1.11
CDH13-211ENST00000568770 KCNH5Q8NCM2 988 aa8.11□□□□□ -1.11
CDH13-211ENST00000568770 LRRC4BQ9NT99 713 aa8.11□□□□□ -1.11
CDH13-211ENST00000568770 PCDHGA11Q9Y5H2 935 aa8.11□□□□□ -1.11
CDH13-211ENST00000568770 EMILIN1Q9Y6C2 1016 aa8.11□□□□□ -1.11
CDH13-211ENST00000568770 MON2Q7Z3U7 1717 aa8.11□□□□□ -1.11
CDH13-211ENST00000568770 DOT1LQ8TEK3 1739 aa8.1□□□□□ -1.11
CDH13-211ENST00000568770 CLDN10P78369 228 aa8.1□□□□□ -1.11
CDH13-211ENST00000568770 USP4Q13107 963 aa8.1□□□□□ -1.11
CDH13-211ENST00000568770 CC2D2BQ6DHV5 1058 aa8.1□□□□□ -1.11
CDH13-211ENST00000568770 VRTNQ9H8Y1 702 aa8.1□□□□□ -1.11
CDH13-211ENST00000568770 KIAA1024Q9UPX6 916 aa8.1□□□□□ -1.11
CDH13-211ENST00000568770 USP54Q70EL1 1684 aa8.09□□□□□ -1.11
CDH13-211ENST00000568770 NRG2O14511 850 aaPredicted RBP8.09□□□□□ -1.11
CDH13-211ENST00000568770 LZTS3O60299 673 aaPredicted RBP8.09□□□□□ -1.11
CDH13-211ENST00000568770 POLD1P28340 1107 aa8.09□□□□□ -1.11
CDH13-211ENST00000568770 CRTC2Q53ET0 693 aaPredicted RBP8.09□□□□□ -1.11
CDH13-211ENST00000568770 NLGN2Q8NFZ4 835 aa8.09□□□□□ -1.11
CDH13-211ENST00000568770 PGPEP1Q9NXJ5 209 aa8.09□□□□□ -1.11
CDH13-211ENST00000568770 RGPD2P0DJD1 1756 aa8.09□□□□□ -1.11
CDH13-211ENST00000568770 PNPLA7Q6ZV29 1317 aa8.08□□□□□ -1.12
CDH13-211ENST00000568770 TTC21BQ7Z4L5 1316 aa8.08□□□□□ -1.12
CDH13-211ENST00000568770 AVPP01185 164 aa8.08□□□□□ -1.12
CDH13-211ENST00000568770 YBX3P16989 372 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDH13-211ENST00000568770 OGFOD1Q8N543 542 aa8.08□□□□□ -1.12
CDH13-211ENST00000568770 SLC16A10Q8TF71 515 aa8.08□□□□□ -1.12
CDH13-211ENST00000568770 PBXIP1Q96AQ6 731 aa8.08□□□□□ -1.12
CDH13-211ENST00000568770 AGBL1Q96MI9 1066 aa8.08□□□□□ -1.12
CDH13-211ENST00000568770 NOD1Q9Y239 953 aa8.08□□□□□ -1.12
CDH13-211ENST00000568770 PCNTO95613 3336 aa8.07□□□□□ -1.12
CDH13-211ENST00000568770 DKK1O94907 266 aa8.07□□□□□ -1.12
CDH13-211ENST00000568770 IL2RBP14784 551 aa8.07□□□□□ -1.12
CDH13-211ENST00000568770 RASA1P20936 1047 aa8.07□□□□□ -1.12
CDH13-211ENST00000568770 KCNQ4P56696 695 aa8.07□□□□□ -1.12
CDH13-211ENST00000568770 GTF2IP78347 998 aa8.07□□□□□ -1.12
CDH13-211ENST00000568770 Q6ZVU0 165 aa8.07□□□□□ -1.12
CDH13-211ENST00000568770 NLRP2Q9NX02 1062 aa8.07□□□□□ -1.12
CDH13-211ENST00000568770 TAF1LQ8IZX4 1826 aa8.07□□□□□ -1.12
CDH13-211ENST00000568770 FAM208AQ9UK61 1670 aaKnown RBP8.07□□□□□ -1.12
CDH13-211ENST00000568770 EVC2Q86UK5 1308 aa8.06□□□□□ -1.12
CDH13-211ENST00000568770 TTC21AQ8NDW8 1320 aa8.06□□□□□ -1.12
CDH13-211ENST00000568770 ATP10DQ9P241 1426 aa8.06□□□□□ -1.12
CDH13-211ENST00000568770 C5P01031 1676 aa8.06□□□□□ -1.12
CDH13-211ENST00000568770 CAPN5O15484 640 aaPredicted RBP8.06□□□□□ -1.12
CDH13-211ENST00000568770 GRIN3BO60391 1043 aa8.06□□□□□ -1.12
CDH13-211ENST00000568770 DGAT1O75907 488 aa8.06□□□□□ -1.12
CDH13-211ENST00000568770 MYCP01106 439 aaPredicted RBP8.06□□□□□ -1.12
CDH13-211ENST00000568770 PTK7Q13308 1070 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms