RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 UBR1Q8IWV7 1749 aa8.16□□□□□ -1.1
CAPN3-218ENST00000568153 ASXL1Q8IXJ9 1541 aa8.16□□□□□ -1.1
CAPN3-218ENST00000568153 MYO3AQ8NEV4 1616 aa8.16□□□□□ -1.1
CAPN3-218ENST00000568153 NLRP3Q96P20 1036 aa8.16□□□□□ -1.1
CAPN3-218ENST00000568153 PIK3R4Q99570 1358 aa8.16□□□□□ -1.1
CAPN3-218ENST00000568153 SERTAD1Q9UHV2 236 aa8.16□□□□□ -1.1
CAPN3-218ENST00000568153 ZMIZ1Q9ULJ6 1067 aa8.16□□□□□ -1.1
CAPN3-218ENST00000568153 MYO5BQ9ULV0 1848 aa8.15□□□□□ -1.1
CAPN3-218ENST00000568153 ADAMTSL3P82987 1691 aa8.15□□□□□ -1.1
CAPN3-218ENST00000568153 SFI1A8K8P3 1242 aa8.15□□□□□ -1.1
CAPN3-218ENST00000568153 FYB1O15117 783 aa8.15□□□□□ -1.1
CAPN3-218ENST00000568153 KCNA6P17658 529 aa8.15□□□□□ -1.1
CAPN3-218ENST00000568153 GMPRP36959 345 aa8.15□□□□□ -1.1
CAPN3-218ENST00000568153 TNNT2P45379 298 aaPredicted RBP8.15□□□□□ -1.1
CAPN3-218ENST00000568153 CENPCQ03188 943 aa8.15□□□□□ -1.1
CAPN3-218ENST00000568153 WDR43Q15061 677 aaKnown RBP eCLIP8.15□□□□□ -1.1
CAPN3-218ENST00000568153 CCDC155Q8N6L0 562 aa8.15□□□□□ -1.1
CAPN3-218ENST00000568153 GRIP2Q9C0E4 1043 aa8.15□□□□□ -1.1
CAPN3-218ENST00000568153 NOVA2Q9UNW9 492 aaKnown RBP8.15□□□□□ -1.1
CAPN3-218ENST00000568153 PTPRUQ92729 1446 aa8.14□□□□□ -1.11
CAPN3-218ENST00000568153 NSD3Q9BZ95 1437 aa8.14□□□□□ -1.11
CAPN3-218ENST00000568153 ELOAQ14241 798 aaKnown RBP8.14□□□□□ -1.11
CAPN3-218ENST00000568153 PRICKLE2Q7Z3G6 844 aa8.14□□□□□ -1.11
CAPN3-218ENST00000568153 CFAP53Q96M91 514 aa8.14□□□□□ -1.11
CAPN3-218ENST00000568153 SLC4A9Q96Q91 983 aa8.14□□□□□ -1.11
CAPN3-218ENST00000568153 FHDC1Q9C0D6 1143 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-218ENST00000568153 ADAMTS8Q9UP79 889 aa8.14□□□□□ -1.11
CAPN3-218ENST00000568153 TULP4Q9NRJ4 1543 aa8.13□□□□□ -1.11
CAPN3-218ENST00000568153 NSD2O96028 1365 aa8.13□□□□□ -1.11
CAPN3-218ENST00000568153 ZBED9Q6R2W3 1325 aa8.13□□□□□ -1.11
CAPN3-218ENST00000568153 MTHFSP49914 203 aa8.13□□□□□ -1.11
CAPN3-218ENST00000568153 SEC13P55735 322 aa8.13□□□□□ -1.11
CAPN3-218ENST00000568153 TLR1Q15399 786 aa8.13□□□□□ -1.11
CAPN3-218ENST00000568153 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.13□□□□□ -1.11
CAPN3-218ENST00000568153 STK32AQ8WU08 396 aa8.13□□□□□ -1.11
CAPN3-218ENST00000568153 GGNBP2Q9H3C7 697 aa8.13□□□□□ -1.11
CAPN3-218ENST00000568153 A0A1W2PP64 1363 aa8.12□□□□□ -1.11
CAPN3-218ENST00000568153 RIMS1Q86UR5 1692 aaKnown RBP8.12□□□□□ -1.11
CAPN3-218ENST00000568153 BACH1O14867 736 aa8.12□□□□□ -1.11
CAPN3-218ENST00000568153 RHOQP17081 205 aa8.12□□□□□ -1.11
CAPN3-218ENST00000568153 SMTNP53814 917 aa8.12□□□□□ -1.11
CAPN3-218ENST00000568153 EPHA4P54764 986 aa8.12□□□□□ -1.11
CAPN3-218ENST00000568153 TSEN2Q8NCE0 465 aaKnown RBP8.12□□□□□ -1.11
CAPN3-218ENST00000568153 FAM200AQ8TCP9 573 aa8.12□□□□□ -1.11
CAPN3-218ENST00000568153 RBM19Q9Y4C8 960 aaKnown RBP8.12□□□□□ -1.11
CAPN3-218ENST00000568153 CEP170BQ9Y4F5 1589 aaPredicted RBP8.12□□□□□ -1.11
CAPN3-218ENST00000568153 QRICH2Q9H0J4 1663 aa8.11□□□□□ -1.11
CAPN3-218ENST00000568153 INSRP06213 1382 aa8.11□□□□□ -1.11
CAPN3-218ENST00000568153 A6NJY4 79 aa8.11□□□□□ -1.11
CAPN3-218ENST00000568153 SPATA31C2B4DYI2 1134 aa8.11□□□□□ -1.11
CAPN3-218ENST00000568153 M0R2N6 131 aa8.11□□□□□ -1.11
CAPN3-218ENST00000568153 ITGA6P23229 1130 aa8.11□□□□□ -1.11
CAPN3-218ENST00000568153 MTFR1Q15390 333 aa8.11□□□□□ -1.11
CAPN3-218ENST00000568153 SLC27A3Q5K4L6 730 aa8.11□□□□□ -1.11
CAPN3-218ENST00000568153 TNS4Q8IZW8 715 aa8.11□□□□□ -1.11
CAPN3-218ENST00000568153 NGDNQ8NEJ9 315 aaKnown RBP8.11□□□□□ -1.11
CAPN3-218ENST00000568153 NANOS1Q8WY41 292 aaKnown RBP8.11□□□□□ -1.11
CAPN3-218ENST00000568153 SETD1BQ9UPS6 1966 aaKnown RBP8.11□□□□□ -1.11
CAPN3-218ENST00000568153 NPHP4O75161 1426 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-218ENST00000568153 PPIP5K1Q6PFW1 1433 aa8.11□□□□□ -1.11
CAPN3-218ENST00000568153 NRXN3Q9Y4C0 1643 aa8.11□□□□□ -1.11
CAPN3-218ENST00000568153 ACEP12821 1306 aa8.1□□□□□ -1.11
CAPN3-218ENST00000568153 PRR36Q9H6K5 1346 aa8.1□□□□□ -1.11
CAPN3-218ENST00000568153 ARHGEF28Q8N1W1 1705 aaKnown RBP8.1□□□□□ -1.11
CAPN3-218ENST00000568153 POU4F2Q12837 409 aa8.1□□□□□ -1.11
CAPN3-218ENST00000568153 PDE3BQ13370 1112 aa8.1□□□□□ -1.11
CAPN3-218ENST00000568153 TMEM164Q5U3C3 297 aa8.1□□□□□ -1.11
CAPN3-218ENST00000568153 COG3Q96JB2 828 aa8.1□□□□□ -1.11
CAPN3-218ENST00000568153 ZSCAN10Q96SZ4 725 aaPredicted RBP8.1□□□□□ -1.11
CAPN3-218ENST00000568153 NUDCQ9Y266 331 aa8.1□□□□□ -1.11
CAPN3-218ENST00000568153 USP3Q9Y6I4 520 aa8.1□□□□□ -1.11
CAPN3-218ENST00000568153 POLR3AO14802 1390 aaPredicted RBP8.1□□□□□ -1.11
CAPN3-218ENST00000568153 LGR5O75473 907 aa8.09□□□□□ -1.11
CAPN3-218ENST00000568153 NBPF10Q6P3W6 841 aaKnown RBP8.09□□□□□ -1.11
CAPN3-218ENST00000568153 NBPF15Q8N660 670 aa8.09□□□□□ -1.11
CAPN3-218ENST00000568153 GPR161Q8N6U8 529 aaKnown RBP8.09□□□□□ -1.11
CAPN3-218ENST00000568153 PMFBP1Q8TBY8 1022 aa8.09□□□□□ -1.11
CAPN3-218ENST00000568153 SCHIP1Q9P0W5 487 aaPredicted RBP8.09□□□□□ -1.11
CAPN3-218ENST00000568153 IQSEC3Q9UPP2 1182 aaPredicted RBP8.09□□□□□ -1.11
CAPN3-218ENST00000568153 CPSF1Q10570 1443 aaKnown RBP8.09□□□□□ -1.11
CAPN3-218ENST00000568153 PTCH1Q13635 1447 aa8.09□□□□□ -1.11
CAPN3-218ENST00000568153 DIP2AQ14689 1571 aa8.09□□□□□ -1.11
CAPN3-218ENST00000568153 TTC21BQ7Z4L5 1316 aa8.08□□□□□ -1.12
CAPN3-218ENST00000568153 HSPA2P54652 639 aa8.08□□□□□ -1.12
CAPN3-218ENST00000568153 FOXK2Q01167 660 aa8.08□□□□□ -1.12
CAPN3-218ENST00000568153 WDR44Q5JSH3 913 aa8.08□□□□□ -1.12
CAPN3-218ENST00000568153 NME9Q86XW9 330 aa8.08□□□□□ -1.12
CAPN3-218ENST00000568153 NGEFQ8N5V2 710 aa8.08□□□□□ -1.12
CAPN3-218ENST00000568153 PNNQ9H307 717 aaKnown RBP8.08□□□□□ -1.12
CAPN3-218ENST00000568153 C19orf44Q9H6X5 657 aa8.08□□□□□ -1.12
CAPN3-218ENST00000568153 CUEDC1Q9NWM3 386 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-218ENST00000568153 CPS1P31327 1500 aa8.08□□□□□ -1.12
CAPN3-218ENST00000568153 ATP7BP35670 1465 aa8.07□□□□□ -1.12
CAPN3-218ENST00000568153 CD163L1Q9NR16 1453 aa8.07□□□□□ -1.12
CAPN3-218ENST00000568153 EDC4Q6P2E9 1401 aaKnown RBP8.07□□□□□ -1.12
CAPN3-218ENST00000568153 CDK2AP1O14519 115 aa8.07□□□□□ -1.12
CAPN3-218ENST00000568153 LORP23490 312 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-218ENST00000568153 TBCELQ5QJ74 424 aa8.07□□□□□ -1.12
CAPN3-218ENST00000568153 TMEM214Q6NUQ4 689 aaKnown RBP8.07□□□□□ -1.12
CAPN3-218ENST00000568153 ZNF295-AS1Q8N0V1 137 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms