RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 SULT6B1Q6IMI4 303 aa10.27□□□□□ -0.77
SMG1-214ENST00000568038 DZIP3Q86Y13 1208 aaKnown RBP10.27□□□□□ -0.77
SMG1-214ENST00000568038 FNBP4Q8N3X1 1017 aaPredicted RBP10.27□□□□□ -0.77
SMG1-214ENST00000568038 USP35Q9P2H5 1018 aa10.27□□□□□ -0.77
SMG1-214ENST00000568038 ADAMTS8Q9UP79 889 aa10.27□□□□□ -0.77
SMG1-214ENST00000568038 GPSM3Q9Y4H4 160 aa10.27□□□□□ -0.77
SMG1-214ENST00000568038 PLCH1Q4KWH8 1693 aa10.27□□□□□ -0.77
SMG1-214ENST00000568038 AEBP1Q8IUX7 1158 aa10.26□□□□□ -0.77
SMG1-214ENST00000568038 TSEN34Q9BSV6 310 aaKnown RBP10.26□□□□□ -0.77
SMG1-214ENST00000568038 TRIM34Q9BYJ4 488 aa10.26□□□□□ -0.77
SMG1-214ENST00000568038 IGSF1Q8N6C5 1336 aa10.26□□□□□ -0.77
SMG1-214ENST00000568038 BCL9LQ86UU0 1499 aa10.25□□□□□ -0.77
SMG1-214ENST00000568038 RGPD2P0DJD1 1756 aa10.25□□□□□ -0.77
SMG1-214ENST00000568038 INTS6LQ5JSJ4 861 aaKnown RBP10.25□□□□□ -0.77
SMG1-214ENST00000568038 CARD10Q9BWT7 1032 aa10.25□□□□□ -0.77
SMG1-214ENST00000568038 CRB1P82279 1406 aa10.24□□□□□ -0.77
SMG1-214ENST00000568038 DHX9Q08211 1270 aaKnown RBP10.24□□□□□ -0.77
SMG1-214ENST00000568038 VPS72Q15906 364 aa10.24□□□□□ -0.77
SMG1-214ENST00000568038 CCDC146Q8IYE0 955 aa10.24□□□□□ -0.77
SMG1-214ENST00000568038 NWD2Q9ULI1 1742 aa10.24□□□□□ -0.77
SMG1-214ENST00000568038 SENP3-EIF4A1A0A087X0R7 540 aa10.23□□□□□ -0.77
SMG1-214ENST00000568038 FIGNL2A6NMB9 653 aa10.23□□□□□ -0.77
SMG1-214ENST00000568038 PRKAR2BP31323 418 aa10.23□□□□□ -0.77
SMG1-214ENST00000568038 TCP11L2Q8N4U5 519 aa10.23□□□□□ -0.77
SMG1-214ENST00000568038 IRF7Q92985 503 aa10.23□□□□□ -0.77
SMG1-214ENST00000568038 AGBL1Q96MI9 1066 aa10.23□□□□□ -0.77
SMG1-214ENST00000568038 QTRT2Q9H974 415 aaKnown RBP10.23□□□□□ -0.77
SMG1-214ENST00000568038 TMPRSS4Q9NRS4 437 aa10.23□□□□□ -0.77
SMG1-214ENST00000568038 TRPC5Q9UL62 973 aaPredicted RBP10.23□□□□□ -0.77
SMG1-214ENST00000568038 NRAPQ86VF7 1730 aa10.23□□□□□ -0.77
SMG1-214ENST00000568038 SPATA31A5Q5VU36 1347 aa10.23□□□□□ -0.77
SMG1-214ENST00000568038 SPATA31A7Q8IWB4 1347 aa10.23□□□□□ -0.77
SMG1-214ENST00000568038 RGPD1P0DJD0 1748 aa10.22□□□□□ -0.77
SMG1-214ENST00000568038 H3BM21 787 aa10.22□□□□□ -0.77
SMG1-214ENST00000568038 WIPF1O43516 503 aa10.22□□□□□ -0.77
SMG1-214ENST00000568038 GMPRP36959 345 aa10.22□□□□□ -0.77
SMG1-214ENST00000568038 NBPF20Q3BBV1 942 aa10.22□□□□□ -0.77
SMG1-214ENST00000568038 ZNF772Q68DY9 489 aaPredicted RBP10.22□□□□□ -0.77
SMG1-214ENST00000568038 RAPGEF4Q8WZA2 1011 aa10.22□□□□□ -0.77
SMG1-214ENST00000568038 PNNQ9H307 717 aaKnown RBP10.22□□□□□ -0.77
SMG1-214ENST00000568038 SPATA31A1Q5TZJ5 1347 aa10.22□□□□□ -0.77
SMG1-214ENST00000568038 NEFMP07197 916 aa10.21□□□□□ -0.77
SMG1-214ENST00000568038 TATP17735 454 aaPredicted RBP10.21□□□□□ -0.77
SMG1-214ENST00000568038 INSM1Q01101 510 aaPredicted RBP10.21□□□□□ -0.77
SMG1-214ENST00000568038 RELBQ01201 579 aa10.21□□□□□ -0.77
SMG1-214ENST00000568038 NPAS3Q8IXF0 933 aa10.21□□□□□ -0.77
SMG1-214ENST00000568038 RUNDC1Q96C34 613 aa10.21□□□□□ -0.77
SMG1-214ENST00000568038 GJD4Q96KN9 370 aaPredicted RBP10.21□□□□□ -0.77
SMG1-214ENST00000568038 PHACTR3Q96KR7 559 aa10.21□□□□□ -0.77
SMG1-214ENST00000568038 PLEKHF1Q96S99 279 aa10.21□□□□□ -0.77
SMG1-214ENST00000568038 DNMT3LQ9UJW3 386 aa10.21□□□□□ -0.77
SMG1-214ENST00000568038 FAM208AQ9UK61 1670 aaKnown RBP10.21□□□□□ -0.78
SMG1-214ENST00000568038 ATRNO75882 1429 aa10.2□□□□□ -0.78
SMG1-214ENST00000568038 IL2RBP14784 551 aa10.2□□□□□ -0.78
SMG1-214ENST00000568038 KDRP35968 1356 aa10.2□□□□□ -0.78
SMG1-214ENST00000568038 NCAPD2Q15021 1401 aa10.2□□□□□ -0.78
SMG1-214ENST00000568038 MAPK8IP3Q9UPT6 1336 aa10.2□□□□□ -0.78
SMG1-214ENST00000568038 THRAP3Q9Y2W1 955 aaKnown RBP10.2□□□□□ -0.78
SMG1-214ENST00000568038 PCDHB9Q9Y5E1 797 aa10.2□□□□□ -0.78
SMG1-214ENST00000568038 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.19□□□□□ -0.78
SMG1-214ENST00000568038 MEGF6O75095 1541 aa10.19□□□□□ -0.78
SMG1-214ENST00000568038 ERBB4Q15303 1308 aa10.19□□□□□ -0.78
SMG1-214ENST00000568038 TTLL8A6PVC2 850 aa10.19□□□□□ -0.78
SMG1-214ENST00000568038 APAF1O14727 1248 aa10.19□□□□□ -0.78
SMG1-214ENST00000568038 PLEKHO1Q53GL0 409 aaPredicted RBP10.19□□□□□ -0.78
SMG1-214ENST00000568038 Q6ZVU0 165 aa10.19□□□□□ -0.78
SMG1-214ENST00000568038 RGS17Q9UGC6 210 aaPredicted RBP10.19□□□□□ -0.78
SMG1-214ENST00000568038 ZBBXA8MT70 800 aa10.18□□□□□ -0.78
SMG1-214ENST00000568038 ERVH48-1M5A8F1 160 aa10.18□□□□□ -0.78
SMG1-214ENST00000568038 MTHFSDQ2M296 383 aaKnown RBP10.18□□□□□ -0.78
SMG1-214ENST00000568038 POTEAQ6S8J7 498 aa10.18□□□□□ -0.78
SMG1-214ENST00000568038 ZNF395Q9H8N7 513 aaPredicted RBP10.18□□□□□ -0.78
SMG1-214ENST00000568038 RRP7AQ9Y3A4 280 aaKnown RBP10.18□□□□□ -0.78
SMG1-214ENST00000568038 AMOTQ4VCS5 1084 aa10.17□□□□□ -0.78
SMG1-214ENST00000568038 ZNF530Q6P9A1 599 aaPredicted RBP10.17□□□□□ -0.78
SMG1-214ENST00000568038 ZNF784Q8NCA9 323 aaPredicted RBP10.17□□□□□ -0.78
SMG1-214ENST00000568038 ZCRB1Q8TBF4 217 aaKnown RBP10.17□□□□□ -0.78
SMG1-214ENST00000568038 YTHDC1Q96MU7 727 aaKnown RBP10.17□□□□□ -0.78
SMG1-214ENST00000568038 CDCA7Q9BWT1 371 aaPredicted RBP10.17□□□□□ -0.78
SMG1-214ENST00000568038 SPG7Q9UQ90 795 aa10.17□□□□□ -0.78
SMG1-214ENST00000568038 DISP2A7MBM2 1401 aa10.16□□□□□ -0.78
SMG1-214ENST00000568038 EXOC5O00471 708 aa10.16□□□□□ -0.78
SMG1-214ENST00000568038 FBXO45P0C2W1 286 aa10.16□□□□□ -0.78
SMG1-214ENST00000568038 RXRBP28702 533 aa10.16□□□□□ -0.78
SMG1-214ENST00000568038 TMPOP42166 694 aaKnown RBP10.16□□□□□ -0.78
SMG1-214ENST00000568038 RBM6P78332 1123 aaKnown RBP10.16□□□□□ -0.78
SMG1-214ENST00000568038 NFE2L2Q16236 605 aa10.16□□□□□ -0.78
SMG1-214ENST00000568038 GAS2L2Q8NHY3 880 aa10.16□□□□□ -0.78
SMG1-214ENST00000568038 DDX54Q8TDD1 881 aaKnown RBP10.16□□□□□ -0.78
SMG1-214ENST00000568038 INSM2Q96T92 566 aaPredicted RBP10.16□□□□□ -0.78
SMG1-214ENST00000568038 GLI3P10071 1580 aa10.16□□□□□ -0.78
SMG1-214ENST00000568038 OVOS2A0A0G2JMS6 1433 aa10.16□□□□□ -0.78
SMG1-214ENST00000568038 SPINT1O43278 529 aa10.15□□□□□ -0.78
SMG1-214ENST00000568038 PPFIA3O75145 1194 aa10.15□□□□□ -0.78
SMG1-214ENST00000568038 RIPK4P57078 832 aa10.15□□□□□ -0.78
SMG1-214ENST00000568038 HNRNPUQ00839 825 aaKnown RBP eCLIP10.15□□□□□ -0.78
SMG1-214ENST00000568038 DDB1Q16531 1140 aa10.15□□□□□ -0.78
SMG1-214ENST00000568038 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.15□□□□□ -0.78
SMG1-214ENST00000568038 C1orf141Q5JVX7 400 aa10.15□□□□□ -0.78
SMG1-214ENST00000568038 SEPT12Q8IYM1 358 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms