RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 TTC28Q96AY4 2481 aa12.4□□□□□ -0.42
SMPD3-206ENST00000566009 SLC24A1O60721 1099 aa12.4□□□□□ -0.42
SMPD3-206ENST00000566009 GJA8P48165 433 aa12.4□□□□□ -0.42
SMPD3-206ENST00000566009 SP8Q8IXZ3 490 aa12.4□□□□□ -0.42
SMPD3-206ENST00000566009 KCNQ5Q9NR82 932 aa12.4□□□□□ -0.42
SMPD3-206ENST00000566009 USP16Q9Y5T5 823 aa12.4□□□□□ -0.42
SMPD3-206ENST00000566009 IRS2Q9Y4H2 1338 aa12.39□□□□□ -0.43
SMPD3-206ENST00000566009 C3orf67Q6ZVT6 689 aa12.39□□□□□ -0.43
SMPD3-206ENST00000566009 DBNDD1Q9H9R9 158 aa12.39□□□□□ -0.43
SMPD3-206ENST00000566009 POTEB2H3BUK9 544 aa12.38□□□□□ -0.43
SMPD3-206ENST00000566009 NF2P35240 595 aa12.38□□□□□ -0.43
SMPD3-206ENST00000566009 LDLRAD1Q5T700 205 aa12.38□□□□□ -0.43
SMPD3-206ENST00000566009 ARMC9Q7Z3E5 817 aa12.38□□□□□ -0.43
SMPD3-206ENST00000566009 TDHQ8IZJ6 230 aa12.38□□□□□ -0.43
SMPD3-206ENST00000566009 FAM161BQ96MY7 647 aa12.38□□□□□ -0.43
SMPD3-206ENST00000566009 FMNL2Q96PY5 1086 aa12.38□□□□□ -0.43
SMPD3-206ENST00000566009 BBOX1O75936 387 aa12.37□□□□□ -0.43
SMPD3-206ENST00000566009 FARP2O94887 1054 aaPredicted RBP12.37□□□□□ -0.43
SMPD3-206ENST00000566009 GJB1P08034 283 aa12.37□□□□□ -0.43
SMPD3-206ENST00000566009 ZNF280AP59817 542 aaPredicted RBP12.37□□□□□ -0.43
SMPD3-206ENST00000566009 PRKG1Q13976 671 aa12.37□□□□□ -0.43
SMPD3-206ENST00000566009 OTUD7BQ6GQQ9 843 aa12.37□□□□□ -0.43
SMPD3-206ENST00000566009 FAM109BQ6ICB4 259 aaPredicted RBP12.37□□□□□ -0.43
SMPD3-206ENST00000566009 RTL9Q8NET4 1388 aa12.37□□□□□ -0.43
SMPD3-206ENST00000566009 MUC3AQ02505 3323 aa12.37□□□□□ -0.43
SMPD3-206ENST00000566009 ABCC4O15439 1325 aa12.37□□□□□ -0.43
SMPD3-206ENST00000566009 VIL1P09327 827 aaKnown RBP12.36□□□□□ -0.43
SMPD3-206ENST00000566009 WASHC4Q2M389 1173 aa12.36□□□□□ -0.43
SMPD3-206ENST00000566009 MAFAQ8NHW3 353 aaPredicted RBP12.36□□□□□ -0.43
SMPD3-206ENST00000566009 SLC10A4Q96EP9 437 aa12.36□□□□□ -0.43
SMPD3-206ENST00000566009 ZNF646O15015 1829 aaPredicted RBP12.35□□□□□ -0.43
SMPD3-206ENST00000566009 ZBTB48P10074 688 aaPredicted RBP12.35□□□□□ -0.43
SMPD3-206ENST00000566009 NLRP3Q96P20 1036 aa12.35□□□□□ -0.43
SMPD3-206ENST00000566009 PTPN18Q99952 460 aa12.35□□□□□ -0.43
SMPD3-206ENST00000566009 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.35□□□□□ -0.43
SMPD3-206ENST00000566009 ARIH1Q9Y4X5 557 aaPredicted RBP12.35□□□□□ -0.43
SMPD3-206ENST00000566009 RIMBP2O15034 1052 aa12.34□□□□□ -0.43
SMPD3-206ENST00000566009 SUSD4Q5VX71 490 aa12.34□□□□□ -0.43
SMPD3-206ENST00000566009 WNK4Q96J92 1243 aa12.34□□□□□ -0.43
SMPD3-206ENST00000566009 SIN3AQ96ST3 1273 aa12.34□□□□□ -0.43
SMPD3-206ENST00000566009 ANGEL1Q9UNK9 670 aaKnown RBP12.34□□□□□ -0.43
SMPD3-206ENST00000566009 NBPF26B4DH59 902 aa12.33□□□□□ -0.44
SMPD3-206ENST00000566009 ECE2O60344 883 aa12.33□□□□□ -0.44
SMPD3-206ENST00000566009 ECM2O94769 699 aaPredicted RBP12.33□□□□□ -0.44
SMPD3-206ENST00000566009 DOK7Q18PE1 504 aa12.33□□□□□ -0.44
SMPD3-206ENST00000566009 MTHFSDQ2M296 383 aaKnown RBP12.33□□□□□ -0.44
SMPD3-206ENST00000566009 TJAP1Q5JTD0 557 aa12.33□□□□□ -0.44
SMPD3-206ENST00000566009 NBPF10Q6P3W6 841 aaKnown RBP12.33□□□□□ -0.44
SMPD3-206ENST00000566009 NECTIN2Q92692 538 aa12.33□□□□□ -0.44
SMPD3-206ENST00000566009 MYOZ2Q9NPC6 264 aa12.33□□□□□ -0.44
SMPD3-206ENST00000566009 ZMYND8Q9ULU4 1186 aaPredicted RBP12.33□□□□□ -0.44
SMPD3-206ENST00000566009 EYSQ5T1H1 3165 aa12.32□□□□□ -0.44
SMPD3-206ENST00000566009 KCNQ3O43525 872 aa12.32□□□□□ -0.44
SMPD3-206ENST00000566009 CCL5P13501 91 aa12.32□□□□□ -0.44
SMPD3-206ENST00000566009 TEFQ10587 303 aa12.32□□□□□ -0.44
SMPD3-206ENST00000566009 U2AF1L4Q8WU68 220 aaKnown RBP12.32□□□□□ -0.44
SMPD3-206ENST00000566009 CDX2Q99626 313 aaPredicted RBP12.32□□□□□ -0.44
SMPD3-206ENST00000566009 RNF208Q9H0X6 261 aa12.32□□□□□ -0.44
SMPD3-206ENST00000566009 TAF1P21675 1872 aa12.31□□□□□ -0.44
SMPD3-206ENST00000566009 DUOX1Q9NRD9 1551 aa12.31□□□□□ -0.44
SMPD3-206ENST00000566009 TESPA1A2RU30 521 aaPredicted RBP12.31□□□□□ -0.44
SMPD3-206ENST00000566009 GPTP24298 496 aa12.31□□□□□ -0.44
SMPD3-206ENST00000566009 MAGEA10P43363 369 aaPredicted RBP12.31□□□□□ -0.44
SMPD3-206ENST00000566009 ALYREFQ86V81 257 aaKnown RBP12.31□□□□□ -0.44
SMPD3-206ENST00000566009 ARHGAP39Q9C0H5 1083 aa12.31□□□□□ -0.44
SMPD3-206ENST00000566009 FZD1Q9UP38 647 aa12.31□□□□□ -0.44
SMPD3-206ENST00000566009 UBN2Q6ZU65 1347 aa12.31□□□□□ -0.44
SMPD3-206ENST00000566009 IBTKQ9P2D0 1353 aaPredicted RBP12.3□□□□□ -0.44
SMPD3-206ENST00000566009 PRMT2P55345 433 aa12.3□□□□□ -0.44
SMPD3-206ENST00000566009 NEUROD1Q13562 356 aa12.3□□□□□ -0.44
SMPD3-206ENST00000566009 NBPF9Q3BBW0 867 aa12.3□□□□□ -0.44
SMPD3-206ENST00000566009 AGBL3Q8NEM8 1001 aa12.3□□□□□ -0.44
SMPD3-206ENST00000566009 CLMNQ96JQ2 1002 aa12.3□□□□□ -0.44
SMPD3-206ENST00000566009 UBE2OQ9C0C9 1292 aaKnown RBP12.3□□□□□ -0.44
SMPD3-206ENST00000566009 PRUNE2Q8WUY3 3088 aa12.29□□□□□ -0.44
SMPD3-206ENST00000566009 SGPL1O95470 568 aa12.29□□□□□ -0.44
SMPD3-206ENST00000566009 NTSR2O95665 410 aa12.29□□□□□ -0.44
SMPD3-206ENST00000566009 USP17L8P0C7I0 530 aa12.29□□□□□ -0.44
SMPD3-206ENST00000566009 RSBN1LQ6PCB5 846 aaPredicted RBP12.29□□□□□ -0.44
SMPD3-206ENST00000566009 C7orf61Q8IZ16 206 aa12.29□□□□□ -0.44
SMPD3-206ENST00000566009 IL17REQ8NFR9 667 aa12.29□□□□□ -0.44
SMPD3-206ENST00000566009 CNKSR2Q8WXI2 1034 aa12.29□□□□□ -0.44
SMPD3-206ENST00000566009 ZFYVE28Q9HCC9 887 aa12.29□□□□□ -0.44
SMPD3-206ENST00000566009 ERVV-1B6SEH8 477 aa12.28□□□□□ -0.44
SMPD3-206ENST00000566009 C6orf229H3BNL8 230 aa12.28□□□□□ -0.44
SMPD3-206ENST00000566009 GNRH1P01148 92 aa12.28□□□□□ -0.44
SMPD3-206ENST00000566009 SYN1P17600 705 aa12.28□□□□□ -0.44
SMPD3-206ENST00000566009 GRK4P32298 578 aa12.28□□□□□ -0.44
SMPD3-206ENST00000566009 IL13P35225 146 aa12.28□□□□□ -0.44
SMPD3-206ENST00000566009 GJA5P36382 358 aa12.28□□□□□ -0.44
SMPD3-206ENST00000566009 KIF22Q14807 665 aa12.28□□□□□ -0.44
SMPD3-206ENST00000566009 SLC10A5Q5PT55 438 aa12.28□□□□□ -0.44
SMPD3-206ENST00000566009 ZNF697Q5TEC3 545 aa12.28□□□□□ -0.44
SMPD3-206ENST00000566009 NSFL1CQ9UNZ2 370 aaKnown RBP12.28□□□□□ -0.44
SMPD3-206ENST00000566009 CACNA1AO00555 2505 aa12.27□□□□□ -0.45
SMPD3-206ENST00000566009 LACTBP83111 547 aaPredicted RBP12.27□□□□□ -0.45
SMPD3-206ENST00000566009 GRAPQ13588 217 aa12.27□□□□□ -0.45
SMPD3-206ENST00000566009 TAF1CQ15572 869 aaPredicted RBP12.27□□□□□ -0.45
SMPD3-206ENST00000566009 MAP3K11Q16584 847 aa12.27□□□□□ -0.45
SMPD3-206ENST00000566009 GRAPLQ8TC17 118 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms