RNA–Protein interactions for RNA: ENST00000563665.3

ZNF688-204, Transcript of zinc finger protein 688, humanhuman

TSL 1 (best)

Gene ZNF688, Length 1,414 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF688-204ENST00000563665 TSHZ3Q63HK5 1081 aa28.9■■■□□ 2.22
ZNF688-204ENST00000563665 CCDC24Q8N4L8 307 aa28.9■■■□□ 2.22
ZNF688-204ENST00000563665 VGLL2Q8N8G2 317 aa28.9■■■□□ 2.22
ZNF688-204ENST00000563665 ANKRD18AQ8IVF6 992 aa28.89■■■□□ 2.22
ZNF688-204ENST00000563665 TLR7Q9NYK1 1049 aaKnown RBP28.89■■■□□ 2.22
ZNF688-204ENST00000563665 DBNLQ9UJU6 430 aaKnown RBP28.89■■■□□ 2.22
ZNF688-204ENST00000563665 MMP10P09238 476 aa28.88■■■□□ 2.21
ZNF688-204ENST00000563665 CRY2Q49AN0 593 aa28.88■■■□□ 2.21
ZNF688-204ENST00000563665 PARP3Q9Y6F1 533 aa28.88■■■□□ 2.21
ZNF688-204ENST00000563665 SDSP20132 328 aa28.87■■■□□ 2.21
ZNF688-204ENST00000563665 KLRG2A4D1S0 409 aaPredicted RBP28.86■■■□□ 2.21
ZNF688-204ENST00000563665 DDX46Q7L014 1031 aaKnown RBP28.86■■■□□ 2.21
ZNF688-204ENST00000563665 BSDC1Q9NW68 430 aaPredicted RBP28.86■■■□□ 2.21
ZNF688-204ENST00000563665 A0A1B0GUL7 405 aa28.86■■■□□ 2.21
ZNF688-204ENST00000563665 PDE8BO95263 885 aa28.86■■■□□ 2.21
ZNF688-204ENST00000563665 CDC45O75419 566 aa28.85■■■□□ 2.21
ZNF688-204ENST00000563665 DBNDD2Q9BQY9 259 aa28.85■■■□□ 2.21
ZNF688-204ENST00000563665 RPS8P62241 208 aaKnown RBP28.84■■■□□ 2.21
ZNF688-204ENST00000563665 ATP2B3Q16720 1220 aa28.84■■■□□ 2.21
ZNF688-204ENST00000563665 MSL1Q68DK7 614 aa28.84■■■□□ 2.21
ZNF688-204ENST00000563665 SLC16A10Q8TF71 515 aa28.84■■■□□ 2.21
ZNF688-204ENST00000563665 UPF1Q92900 1129 aaKnown RBP eCLIP28.84■■■□□ 2.21
ZNF688-204ENST00000563665 BRIP1Q9BX63 1249 aa28.84■■■□□ 2.21
ZNF688-204ENST00000563665 ATP5JP18859 108 aa28.83■■■□□ 2.21
ZNF688-204ENST00000563665 CELF1Q92879 486 aaKnown RBP28.83■■■□□ 2.21
ZNF688-204ENST00000563665 TIMM10P62072 90 aa28.82■■■□□ 2.2
ZNF688-204ENST00000563665 PUM3Q15397 648 aaKnown RBP28.82■■■□□ 2.2
ZNF688-204ENST00000563665 NEUROD6Q96NK8 337 aa28.82■■■□□ 2.2
ZNF688-204ENST00000563665 FGFR2P21802 821 aa28.81■■■□□ 2.2
ZNF688-204ENST00000563665 GRAPQ13588 217 aa28.81■■■□□ 2.2
ZNF688-204ENST00000563665 GRAPLQ8TC17 118 aaPredicted RBP28.81■■■□□ 2.2
ZNF688-204ENST00000563665 RPGRQ92834 1020 aaKnown RBP28.81■■■□□ 2.2
ZNF688-204ENST00000563665 HOXA10P31260 410 aaPredicted RBP28.8■■■□□ 2.2
ZNF688-204ENST00000563665 COL11A2P13942 1736 aaPredicted RBP28.8■■■□□ 2.2
ZNF688-204ENST00000563665 CHRNDQ07001 517 aa28.79■■■□□ 2.2
ZNF688-204ENST00000563665 TBC1D9Q6ZT07 1266 aa28.79■■■□□ 2.2
ZNF688-204ENST00000563665 CNTROBQ8N137 903 aa28.79■■■□□ 2.2
ZNF688-204ENST00000563665 LPIN2Q92539 896 aa28.79■■■□□ 2.2
ZNF688-204ENST00000563665 TRIM6-TRIM34B2RNG4 842 aa28.78■■■□□ 2.2
ZNF688-204ENST00000563665 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.78■■■□□ 2.2
ZNF688-204ENST00000563665 XAGE2Q96GT9 111 aa28.78■■■□□ 2.2
ZNF688-204ENST00000563665 RBM17Q96I25 401 aaKnown RBP28.78■■■□□ 2.2
ZNF688-204ENST00000563665 EIF5BO60841 1220 aaKnown RBP28.77■■■□□ 2.2
ZNF688-204ENST00000563665 CRAMP1Q96RY5 1269 aa28.77■■■□□ 2.2
ZNF688-204ENST00000563665 MINPP1Q9UNW1 487 aa28.77■■■□□ 2.2
ZNF688-204ENST00000563665 LRRC37AA6NMS7 1700 aa28.77■■■□□ 2.2
ZNF688-204ENST00000563665 PDE6BP35913 854 aa28.77■■■□□ 2.2
ZNF688-204ENST00000563665 SLC5A1P13866 664 aa28.76■■■□□ 2.19
ZNF688-204ENST00000563665 ADORA1P30542 326 aa28.76■■■□□ 2.19
ZNF688-204ENST00000563665 CASC1Q6TDU7 716 aa28.76■■■□□ 2.19
ZNF688-204ENST00000563665 HELBQ8NG08 1087 aaPredicted RBP28.76■■■□□ 2.19
ZNF688-204ENST00000563665 RILPL2Q969X0 211 aa28.76■■■□□ 2.19
ZNF688-204ENST00000563665 CCDC158Q5M9N0 1113 aa28.75■■■□□ 2.19
ZNF688-204ENST00000563665 EVI5LQ96CN4 794 aa28.75■■■□□ 2.19
ZNF688-204ENST00000563665 AKAP11Q9UKA4 1901 aa28.75■■■□□ 2.19
ZNF688-204ENST00000563665 GORABQ5T7V8 394 aa28.74■■■□□ 2.19
ZNF688-204ENST00000563665 ZNF512BQ96KM6 892 aaPredicted RBP28.74■■■□□ 2.19
ZNF688-204ENST00000563665 HAUS7Q99871 368 aa28.74■■■□□ 2.19
ZNF688-204ENST00000563665 PDGFDQ9GZP0 370 aaPredicted RBP28.74■■■□□ 2.19
ZNF688-204ENST00000563665 ANKRD2Q9GZV1 360 aa28.74■■■□□ 2.19
ZNF688-204ENST00000563665 BOLA2Q9H3K6 86 aa28.74■■■□□ 2.19
ZNF688-204ENST00000563665 IFIT1P09914 478 aaKnown RBP28.73■■■□□ 2.19
ZNF688-204ENST00000563665 UBE4AQ14139 1066 aa28.73■■■□□ 2.19
ZNF688-204ENST00000563665 RBM19Q9Y4C8 960 aaKnown RBP28.73■■■□□ 2.19
ZNF688-204ENST00000563665 TAF5LO75529 589 aa28.72■■■□□ 2.19
ZNF688-204ENST00000563665 SEC24BO95487 1268 aa28.72■■■□□ 2.19
ZNF688-204ENST00000563665 TMC4Q7Z404 712 aa28.72■■■□□ 2.19
ZNF688-204ENST00000563665 BBOX1O75936 387 aa28.71■■■□□ 2.19
ZNF688-204ENST00000563665 MAP4K4O95819 1239 aaPredicted RBP28.71■■■□□ 2.19
ZNF688-204ENST00000563665 SRGNP10124 158 aa28.71■■■□□ 2.19
ZNF688-204ENST00000563665 NPR1P16066 1061 aa28.71■■■□□ 2.19
ZNF688-204ENST00000563665 KIF13BQ9NQT8 1826 aa28.71■■■□□ 2.19
ZNF688-204ENST00000563665 RFX7Q2KHR2 1363 aa28.71■■■□□ 2.19
ZNF688-204ENST00000563665 TTC39AQ5SRH9 613 aa28.7■■■□□ 2.19
ZNF688-204ENST00000563665 C10orf71Q711Q0 1435 aa28.7■■■□□ 2.18
ZNF688-204ENST00000563665 DLEC1Q9Y238 1755 aa28.7■■■□□ 2.18
ZNF688-204ENST00000563665 CHMLP26374 656 aa28.69■■■□□ 2.18
ZNF688-204ENST00000563665 TICAM2Q86XR7 235 aa28.69■■■□□ 2.18
ZNF688-204ENST00000563665 UPF2Q9HAU5 1272 aaKnown RBP28.69■■■□□ 2.18
ZNF688-204ENST00000563665 UQCRFS1P1P0C7P4 283 aa28.68■■■□□ 2.18
ZNF688-204ENST00000563665 ARID4AP29374 1257 aaPredicted RBP28.68■■■□□ 2.18
ZNF688-204ENST00000563665 LTBP1Q14766 1721 aa28.68■■■□□ 2.18
ZNF688-204ENST00000563665 CACNA1SQ13698 1873 aa28.67■■■□□ 2.18
ZNF688-204ENST00000563665 CCDC102BQ68D86 513 aa28.67■■■□□ 2.18
ZNF688-204ENST00000563665 MASTLQ96GX5 879 aa28.67■■■□□ 2.18
ZNF688-204ENST00000563665 MYH7P12883 1935 aa28.66■■■□□ 2.18
ZNF688-204ENST00000563665 SNAP23O00161 211 aa28.65■■■□□ 2.18
ZNF688-204ENST00000563665 HIP1O00291 1037 aa28.65■■■□□ 2.18
ZNF688-204ENST00000563665 ALDH1B1P30837 517 aa28.65■■■□□ 2.18
ZNF688-204ENST00000563665 DNAJC2Q99543 621 aaKnown RBP28.65■■■□□ 2.18
ZNF688-204ENST00000563665 XDHP47989 1333 aa28.64■■■□□ 2.18
ZNF688-204ENST00000563665 MYH13Q9UKX3 1938 aa28.64■■■□□ 2.18
ZNF688-204ENST00000563665 PHKA1P46020 1223 aa28.64■■■□□ 2.18
ZNF688-204ENST00000563665 MFAP1P55081 439 aaKnown RBP28.64■■■□□ 2.18
ZNF688-204ENST00000563665 STYK1Q6J9G0 422 aa28.64■■■□□ 2.18
ZNF688-204ENST00000563665 MTFR1LQ9H019 292 aa28.64■■■□□ 2.18
ZNF688-204ENST00000563665 PAG1Q9NWQ8 432 aa28.64■■■□□ 2.18
ZNF688-204ENST00000563665 LEMD3Q9Y2U8 911 aa28.64■■■□□ 2.18
ZNF688-204ENST00000563665 C2CD5Q86YS7 1000 aa28.63■■■□□ 2.17
ZNF688-204ENST00000563665 ESYT1Q9BSJ8 1104 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms