RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 SLKQ9H2G2 1235 aaPredicted RBP5.75□□□□□ -1.49
SMG1-207ENST00000563235 PCDHB15Q9Y5E8 787 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 MAPKBP1O60336 1514 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 USP17L3A6NCW0 530 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 USP17L4A6NCW7 530 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 DIAPH1O60610 1272 aaKnown RBP5.75□□□□□ -1.49
SMG1-207ENST00000563235 RHOBTB3O94955 611 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 SEC24BO95487 1268 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 ATF4P18848 351 aaPredicted RBP5.75□□□□□ -1.49
SMG1-207ENST00000563235 CASQ1P31415 396 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 CASP2P42575 452 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 RASA3Q14644 834 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 RC3H1Q5TC82 1133 aaKnown RBP5.75□□□□□ -1.49
SMG1-207ENST00000563235 USP17L2Q6R6M4 530 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 USP17L1Q7RTZ2 530 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 LILRB2Q8N423 598 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 ANKRD42Q8N9B4 389 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 TAF4BQ92750 862 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 TRIM52Q96A61 297 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 CFAP53Q96M91 514 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 XPO4Q9C0E2 1151 aaKnown RBP5.75□□□□□ -1.49
SMG1-207ENST00000563235 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.75□□□□□ -1.493e-7■■□□□ 13.5
SMG1-207ENST00000563235 ZIM2Q9NZV7 527 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 DIP2BQ9P265 1576 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 ORC4O43929 436 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 NBNO60934 754 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 INMTO95050 263 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 FOSL1P15407 271 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 NEK3P51956 506 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 ZNF131P52739 623 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 CCT2P78371 535 aaKnown RBP5.74□□□□□ -1.49
SMG1-207ENST00000563235 PTK7Q13308 1070 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 ALFQ53S48 1182 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 JAKMIP3Q5VZ66 844 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 CAPN12Q6ZSI9 719 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 WAPLQ7Z5K2 1190 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 DDX12PQ92771 950 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 ZNF69Q9UC07 566 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 IPPQ9Y573 584 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 TARBP1Q13395 1621 aaKnown RBP5.74□□□□□ -1.49
SMG1-207ENST00000563235 C19orf81C9J6K1 198 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 PPP2R5BQ15173 497 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 TMC4Q7Z404 712 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 PGBD4Q96DM1 585 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 ZNF700Q9H0M5 742 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 ZNF408Q9H9D4 720 aa5.74□□□□□ -1.49
SMG1-207ENST00000563235 RBM19Q9Y4C8 960 aaKnown RBP5.74□□□□□ -1.49
SMG1-207ENST00000563235 MOXD2PA6NHM9 499 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 FAM196BA6NMK8 535 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 CFAP161Q6P656 301 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 ZNF713Q8N859 430 aaPredicted RBP5.73□□□□□ -1.49
SMG1-207ENST00000563235 APPL2Q8NEU8 664 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 PPHLN1Q8NEY8 458 aaKnown RBP5.73□□□□□ -1.49
SMG1-207ENST00000563235 FLCNQ8NFG4 579 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 ITFG2Q969R8 447 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 SRA1Q9HD15 236 aaKnown RBP5.73□□□□□ -1.49
SMG1-207ENST00000563235 SEPT3Q9UH03 358 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 GOLGA6L6A8MZA4 724 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 C21orf2O43822 256 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 TCEA3O75764 348 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 TNFAIP3P21580 790 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 ST13P50502 369 aaKnown RBP5.73□□□□□ -1.49
SMG1-207ENST00000563235 SATB1Q01826 763 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 PRPF38BQ5VTL8 546 aaKnown RBP5.73□□□□□ -1.49
SMG1-207ENST00000563235 KIAA1614Q5VZ46 1190 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 LVRNQ6Q4G3 990 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 DGKHQ86XP1 1220 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 CKAP2LQ8IYA6 745 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 CABLES1Q8TDN4 633 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 SH3KBP1Q96B97 665 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 CENPTQ96BT3 561 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 ZNF496Q96IT1 587 aaPredicted RBP5.73□□□□□ -1.49
SMG1-207ENST00000563235 MPP4Q96JB8 637 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 MRGBPQ9NV56 204 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 MAFFQ9ULX9 164 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 ZNF652Q9Y2D9 606 aa5.73□□□□□ -1.49
SMG1-207ENST00000563235 DNMT3AQ9Y6K1 912 aaPredicted RBP5.73□□□□□ -1.49
SMG1-207ENST00000563235 SNX2O60749 519 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 COQ9O75208 318 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 SERPINB3P29508 390 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 EPHB1P54762 984 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 NUCB1Q02818 461 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 CPXCR1Q8N123 301 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 SNX21Q969T3 373 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 TBC1D31Q96DN5 1066 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 VMP1Q96GC9 406 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 TRMT2BQ96GJ1 504 aaKnown RBP5.72□□□□□ -1.49
SMG1-207ENST00000563235 FAM163AQ96GL9 167 aaPredicted RBP5.72□□□□□ -1.49
SMG1-207ENST00000563235 SAGE1Q9NXZ1 904 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 EGFL7Q9UHF1 273 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 AGR2O95994 175 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 LDHBP07195 334 aaKnown RBP5.72□□□□□ -1.49
SMG1-207ENST00000563235 CD151P48509 253 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 SARSP49591 514 aaKnown RBP5.72□□□□□ -1.49
SMG1-207ENST00000563235 CATIPQ7Z7H3 387 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 LCA5Q86VQ0 697 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 RASSF3Q86WH2 238 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 SPIRE2Q8WWL2 714 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 SELENOOQ9BVL4 669 aa5.72□□□□□ -1.49
SMG1-207ENST00000563235 NEUROD4Q9HD90 331 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms