RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 PUS3Q9BZE2 481 aaKnown RBP10.54□□□□□ -0.72
TRAF3-209ENST00000560463 BCL11AQ9H165 835 aa10.54□□□□□ -0.72
TRAF3-209ENST00000560463 ECHDC1Q9NTX5 307 aa10.54□□□□□ -0.72
TRAF3-209ENST00000560463 COL4A1P02462 1669 aa10.53□□□□□ -0.72
TRAF3-209ENST00000560463 GSPT1P15170 499 aaKnown RBP10.53□□□□□ -0.72
TRAF3-209ENST00000560463 DDR1Q08345 913 aa10.53□□□□□ -0.72
TRAF3-209ENST00000560463 DDX46Q7L014 1031 aaKnown RBP10.53□□□□□ -0.72
TRAF3-209ENST00000560463 ANKRD18AQ8IVF6 992 aa10.53□□□□□ -0.72
TRAF3-209ENST00000560463 PI4K2BQ8TCG2 481 aa10.53□□□□□ -0.72
TRAF3-209ENST00000560463 SLC16A10Q8TF71 515 aa10.53□□□□□ -0.72
TRAF3-209ENST00000560463 ANO8Q9HCE9 1232 aaPredicted RBP10.53□□□□□ -0.72
TRAF3-209ENST00000560463 TSHZ2Q9NRE2 1034 aa10.53□□□□□ -0.72
TRAF3-209ENST00000560463 PARP3Q9Y6F1 533 aa10.53□□□□□ -0.72
TRAF3-209ENST00000560463 BRCA1P38398 1863 aaKnown RBP10.53□□□□□ -0.72
TRAF3-209ENST00000560463 A0A1B0GUL7 405 aa10.52□□□□□ -0.73
TRAF3-209ENST00000560463 KLRG2A4D1S0 409 aaPredicted RBP10.52□□□□□ -0.73
TRAF3-209ENST00000560463 CDC45O75419 566 aa10.52□□□□□ -0.73
TRAF3-209ENST00000560463 PDE8BO95263 885 aa10.52□□□□□ -0.73
TRAF3-209ENST00000560463 CRY2Q49AN0 593 aa10.52□□□□□ -0.73
TRAF3-209ENST00000560463 METTL24Q5JXM2 366 aa10.52□□□□□ -0.73
TRAF3-209ENST00000560463 VGLL2Q8N8G2 317 aa10.52□□□□□ -0.73
TRAF3-209ENST00000560463 CCDC8Q9H0W5 538 aaPredicted RBP10.52□□□□□ -0.73
TRAF3-209ENST00000560463 SEC31BQ9NQW1 1179 aa10.52□□□□□ -0.73
TRAF3-209ENST00000560463 BSDC1Q9NW68 430 aaPredicted RBP10.52□□□□□ -0.73
TRAF3-209ENST00000560463 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.52□□□□□ -0.73
TRAF3-209ENST00000560463 LTBP1Q14766 1721 aa10.52□□□□□ -0.73
TRAF3-209ENST00000560463 KIAA1551Q9HCM1 1747 aa10.52□□□□□ -0.73
TRAF3-209ENST00000560463 ATP5JP18859 108 aa10.51□□□□□ -0.73
TRAF3-209ENST00000560463 SDSP20132 328 aa10.51□□□□□ -0.73
TRAF3-209ENST00000560463 RPS8P62241 208 aaKnown RBP10.51□□□□□ -0.73
TRAF3-209ENST00000560463 ATP2B3Q16720 1220 aa10.51□□□□□ -0.73
TRAF3-209ENST00000560463 CASC1Q6TDU7 716 aa10.51□□□□□ -0.73
TRAF3-209ENST00000560463 C3orf67Q6ZVT6 689 aa10.51□□□□□ -0.73
TRAF3-209ENST00000560463 TICAM2Q86XR7 235 aa10.51□□□□□ -0.73
TRAF3-209ENST00000560463 CNTROBQ8N137 903 aa10.51□□□□□ -0.73
TRAF3-209ENST00000560463 NEUROD6Q96NK8 337 aa10.51□□□□□ -0.73
TRAF3-209ENST00000560463 BRIP1Q9BX63 1249 aa10.51□□□□□ -0.73
TRAF3-209ENST00000560463 DBNLQ9UJU6 430 aaKnown RBP10.51□□□□□ -0.73
TRAF3-209ENST00000560463 SLX4Q8IY92 1834 aa10.51□□□□□ -0.73
TRAF3-209ENST00000560463 TRIM6-TRIM34B2RNG4 842 aa10.5□□□□□ -0.73
TRAF3-209ENST00000560463 MMP10P09238 476 aa10.5□□□□□ -0.73
TRAF3-209ENST00000560463 HOXA10P31260 410 aaPredicted RBP10.5□□□□□ -0.73
TRAF3-209ENST00000560463 PDE6BP35913 854 aa10.5□□□□□ -0.73
TRAF3-209ENST00000560463 TIMM10P62072 90 aa10.5□□□□□ -0.73
TRAF3-209ENST00000560463 PUM3Q15397 648 aaKnown RBP10.5□□□□□ -0.73
TRAF3-209ENST00000560463 CCDC158Q5M9N0 1113 aa10.5□□□□□ -0.73
TRAF3-209ENST00000560463 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRAF3-209ENST00000560463 LPIN2Q92539 896 aa10.5□□□□□ -0.73
TRAF3-209ENST00000560463 RPGRQ92834 1020 aaKnown RBP10.5□□□□□ -0.73
TRAF3-209ENST00000560463 RBM17Q96I25 401 aaKnown RBP10.5□□□□□ -0.73
TRAF3-209ENST00000560463 SLC5A1P13866 664 aa10.49□□□□□ -0.73
TRAF3-209ENST00000560463 FGFR2P21802 821 aa10.49□□□□□ -0.73
TRAF3-209ENST00000560463 CHRNDQ07001 517 aa10.49□□□□□ -0.73
TRAF3-209ENST00000560463 GRAPQ13588 217 aa10.49□□□□□ -0.73
TRAF3-209ENST00000560463 GORABQ5T7V8 394 aa10.49□□□□□ -0.73
TRAF3-209ENST00000560463 TMC4Q7Z404 712 aa10.49□□□□□ -0.73
TRAF3-209ENST00000560463 GRAPLQ8TC17 118 aaPredicted RBP10.49□□□□□ -0.73
TRAF3-209ENST00000560463 CELF1Q92879 486 aaKnown RBP10.49□□□□□ -0.73
TRAF3-209ENST00000560463 UPF1Q92900 1129 aaKnown RBP eCLIP10.49□□□□□ -0.73
TRAF3-209ENST00000560463 EVI5LQ96CN4 794 aa10.49□□□□□ -0.73
TRAF3-209ENST00000560463 ZNF512BQ96KM6 892 aaPredicted RBP10.49□□□□□ -0.73
TRAF3-209ENST00000560463 CRAMP1Q96RY5 1269 aa10.49□□□□□ -0.73
TRAF3-209ENST00000560463 DBNDD2Q9BQY9 259 aa10.49□□□□□ -0.73
TRAF3-209ENST00000560463 ANKRD2Q9GZV1 360 aa10.49□□□□□ -0.73
TRAF3-209ENST00000560463 UPF2Q9HAU5 1272 aaKnown RBP10.49□□□□□ -0.73
TRAF3-209ENST00000560463 TLR7Q9NYK1 1049 aaKnown RBP10.49□□□□□ -0.73
TRAF3-209ENST00000560463 PSME4Q14997 1843 aa10.49□□□□□ -0.73
TRAF3-209ENST00000560463 MAST2Q6P0Q8 1798 aa10.48□□□□□ -0.73
TRAF3-209ENST00000560463 HIP1O00291 1037 aa10.48□□□□□ -0.73
TRAF3-209ENST00000560463 BBOX1O75936 387 aa10.48□□□□□ -0.73
TRAF3-209ENST00000560463 IFIT1P09914 478 aaKnown RBP10.48□□□□□ -0.73
TRAF3-209ENST00000560463 UBE4AQ14139 1066 aa10.48□□□□□ -0.73
TRAF3-209ENST00000560463 TSHZ3Q63HK5 1081 aa10.48□□□□□ -0.73
TRAF3-209ENST00000560463 TBC1D9Q6ZT07 1266 aa10.48□□□□□ -0.73
TRAF3-209ENST00000560463 CCDC24Q8N4L8 307 aa10.48□□□□□ -0.73
TRAF3-209ENST00000560463 RILPL2Q969X0 211 aa10.48□□□□□ -0.73
TRAF3-209ENST00000560463 XAGE2Q96GT9 111 aa10.48□□□□□ -0.73
TRAF3-209ENST00000560463 MINPP1Q9UNW1 487 aa10.48□□□□□ -0.73
TRAF3-209ENST00000560463 RFX7Q2KHR2 1363 aa10.48□□□□□ -0.73
TRAF3-209ENST00000560463 MYH2Q9UKX2 1941 aa10.48□□□□□ -0.73
TRAF3-209ENST00000560463 ARFGEF1Q9Y6D6 1849 aa10.47□□□□□ -0.73
TRAF3-209ENST00000560463 NPR1P16066 1061 aa10.47□□□□□ -0.73
TRAF3-209ENST00000560463 ALDH1B1P30837 517 aa10.47□□□□□ -0.73
TRAF3-209ENST00000560463 TTC39AQ5SRH9 613 aa10.47□□□□□ -0.73
TRAF3-209ENST00000560463 HAUS7Q99871 368 aa10.47□□□□□ -0.73
TRAF3-209ENST00000560463 RBM19Q9Y4C8 960 aaKnown RBP10.47□□□□□ -0.73
TRAF3-209ENST00000560463 LAMA4Q16363 1823 aa10.47□□□□□ -0.73
TRAF3-209ENST00000560463 UQCRFS1P1P0C7P4 283 aa10.46□□□□□ -0.73
TRAF3-209ENST00000560463 MSL1Q68DK7 614 aa10.46□□□□□ -0.73
TRAF3-209ENST00000560463 MASTLQ96GX5 879 aa10.46□□□□□ -0.73
TRAF3-209ENST00000560463 BOLA2Q9H3K6 86 aa10.46□□□□□ -0.73
TRAF3-209ENST00000560463 FER1L6Q2WGJ9 1857 aa10.45□□□□□ -0.74
TRAF3-209ENST00000560463 CDK5RAP2Q96SN8 1893 aa10.45□□□□□ -0.74
TRAF3-209ENST00000560463 DUOX1Q9NRD9 1551 aa10.45□□□□□ -0.74
TRAF3-209ENST00000560463 XDHP47989 1333 aa10.45□□□□□ -0.74
TRAF3-209ENST00000560463 H0YIN7 160 aa10.45□□□□□ -0.74
TRAF3-209ENST00000560463 ZBTB22O15209 634 aa10.45□□□□□ -0.74
TRAF3-209ENST00000560463 EPB41L2O43491 1005 aaKnown RBP10.45□□□□□ -0.74
TRAF3-209ENST00000560463 TAF5LO75529 589 aa10.45□□□□□ -0.74
TRAF3-209ENST00000560463 SRGNP10124 158 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms