RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 KIF4BQ2VIQ3 1234 aa11.91□□□□□ -0.5
SNRPA1-208ENST00000559686 FBXO46Q6PJ61 603 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-208ENST00000559686 GIGYF2Q6Y7W6 1299 aaKnown RBP11.91□□□□□ -0.5
SNRPA1-208ENST00000559686 DDX46Q7L014 1031 aaKnown RBP11.91□□□□□ -0.5
SNRPA1-208ENST00000559686 DPF2Q92785 391 aa11.91□□□□□ -0.5
SNRPA1-208ENST00000559686 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-208ENST00000559686 ANKRD36CQ5JPF3 1778 aa11.91□□□□□ -0.5
SNRPA1-208ENST00000559686 KDM3BQ7LBC6 1761 aa11.91□□□□□ -0.5
SNRPA1-208ENST00000559686 CENPFP49454 3210 aa11.91□□□□□ -0.5
SNRPA1-208ENST00000559686 POTEFA5A3E0 1075 aa11.9□□□□□ -0.5
SNRPA1-208ENST00000559686 UBE2Q2LH0YL09 131 aa11.9□□□□□ -0.5
SNRPA1-208ENST00000559686 C6orf229H3BNL8 230 aa11.9□□□□□ -0.5
SNRPA1-208ENST00000559686 U2AF1L5P0DN76 240 aaPredicted RBP11.9□□□□□ -0.5
SNRPA1-208ENST00000559686 U2AF1Q01081 240 aaKnown RBP eCLIP11.9□□□□□ -0.5
SNRPA1-208ENST00000559686 WASHC4Q2M389 1173 aa11.9□□□□□ -0.5
SNRPA1-208ENST00000559686 NSFL1CQ9UNZ2 370 aaKnown RBP11.9□□□□□ -0.5
SNRPA1-208ENST00000559686 GPR25O00155 361 aa11.89□□□□□ -0.51
SNRPA1-208ENST00000559686 ECE2O60344 883 aa11.89□□□□□ -0.51
SNRPA1-208ENST00000559686 ANXA1P04083 346 aa11.89□□□□□ -0.51
SNRPA1-208ENST00000559686 FXR1P51114 621 aaKnown RBP eCLIP11.89□□□□□ -0.51
SNRPA1-208ENST00000559686 GRAPQ13588 217 aa11.89□□□□□ -0.51
SNRPA1-208ENST00000559686 TTLL12Q14166 644 aaPredicted RBP11.89□□□□□ -0.51
SNRPA1-208ENST00000559686 PARP10Q53GL7 1025 aa11.89□□□□□ -0.51
SNRPA1-208ENST00000559686 ANGEL2Q5VTE6 544 aaKnown RBP11.89□□□□□ -0.51
SNRPA1-208ENST00000559686 GRAPLQ8TC17 118 aaPredicted RBP11.89□□□□□ -0.51
SNRPA1-208ENST00000559686 DAXXQ9UER7 740 aaPredicted RBP11.89□□□□□ -0.51
SNRPA1-208ENST00000559686 PAPPA2Q9BXP8 1791 aa11.89□□□□□ -0.51
SNRPA1-208ENST00000559686 LRRC37AA6NMS7 1700 aa11.89□□□□□ -0.51
SNRPA1-208ENST00000559686 DDX60Q8IY21 1712 aaKnown RBP11.89□□□□□ -0.51
SNRPA1-208ENST00000559686 SLC10A5Q5PT55 438 aa11.88□□□□□ -0.51
SNRPA1-208ENST00000559686 PRAMEF18Q5VWM3 479 aa11.88□□□□□ -0.51
SNRPA1-208ENST00000559686 CFAP53Q96M91 514 aa11.88□□□□□ -0.51
SNRPA1-208ENST00000559686 R3HDMLQ9H3Y0 253 aa11.88□□□□□ -0.51
SNRPA1-208ENST00000559686 RTL9Q8NET4 1388 aa11.88□□□□□ -0.51
SNRPA1-208ENST00000559686 HTTP42858 3142 aa11.88□□□□□ -0.51
SNRPA1-208ENST00000559686 DLG5Q8TDM6 1919 aa11.88□□□□□ -0.51
SNRPA1-208ENST00000559686 PER1O15534 1290 aaPredicted RBP11.87□□□□□ -0.51
SNRPA1-208ENST00000559686 EIF4A1P60842 406 aaKnown RBP11.87□□□□□ -0.51
SNRPA1-208ENST00000559686 SCARF1Q14162 830 aa11.87□□□□□ -0.51
SNRPA1-208ENST00000559686 LHX8Q68G74 356 aa11.87□□□□□ -0.51
SNRPA1-208ENST00000559686 TRMT112Q9UI30 125 aaKnown RBP11.87□□□□□ -0.51
SNRPA1-208ENST00000559686 COL4A1P02462 1669 aa11.87□□□□□ -0.51
SNRPA1-208ENST00000559686 BRCA2P51587 3418 aa11.86□□□□□ -0.51
SNRPA1-208ENST00000559686 G3V3G9 751 aa11.86□□□□□ -0.51
SNRPA1-208ENST00000559686 FKTNO75072 461 aa11.86□□□□□ -0.51
SNRPA1-208ENST00000559686 EIF2S2P20042 333 aaKnown RBP11.86□□□□□ -0.51
SNRPA1-208ENST00000559686 RPS12P25398 132 aaKnown RBP11.86□□□□□ -0.51
SNRPA1-208ENST00000559686 GPSM2P81274 684 aa11.86□□□□□ -0.51
SNRPA1-208ENST00000559686 AIMP1Q12904 312 aaKnown RBP11.86□□□□□ -0.51
SNRPA1-208ENST00000559686 DCAF8Q5TAQ9 597 aa11.86□□□□□ -0.51
SNRPA1-208ENST00000559686 NECTIN2Q92692 538 aa11.86□□□□□ -0.51
SNRPA1-208ENST00000559686 POLLQ9UGP5 575 aa11.86□□□□□ -0.51
SNRPA1-208ENST00000559686 TIMELESSQ9UNS1 1208 aa11.86□□□□□ -0.51
SNRPA1-208ENST00000559686 NUDCQ9Y266 331 aa11.86□□□□□ -0.51
SNRPA1-208ENST00000559686 SCN9AQ15858 1988 aa11.86□□□□□ -0.51
SNRPA1-208ENST00000559686 CLCN6P51797 869 aa11.85□□□□□ -0.51
SNRPA1-208ENST00000559686 PRKG1Q13976 671 aa11.85□□□□□ -0.51
SNRPA1-208ENST00000559686 PROSER3Q2NL68 480 aa11.85□□□□□ -0.51
SNRPA1-208ENST00000559686 NLRP10Q86W26 655 aa11.85□□□□□ -0.51
SNRPA1-208ENST00000559686 CELF1Q92879 486 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-208ENST00000559686 TRIM17Q9Y577 477 aa11.85□□□□□ -0.51
SNRPA1-208ENST00000559686 HTATSF1O43719 755 aaKnown RBP11.84□□□□□ -0.51
SNRPA1-208ENST00000559686 EN2P19622 333 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-208ENST00000559686 RTL5Q5HYW3 569 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-208ENST00000559686 PCGF6Q9BYE7 350 aa11.84□□□□□ -0.51
SNRPA1-208ENST00000559686 COLQQ9Y215 455 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-208ENST00000559686 EYA3Q99504 573 aa11.83□□□□□ -0.52
SNRPA1-208ENST00000559686 SH3TC1Q8TE82 1336 aa11.83□□□□□ -0.52
SNRPA1-208ENST00000559686 VIL1P09327 827 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-208ENST00000559686 TM4SF4P48230 202 aa11.82□□□□□ -0.52
SNRPA1-208ENST00000559686 FKBP1BP68106 108 aa11.82□□□□□ -0.52
SNRPA1-208ENST00000559686 TMC4Q7Z404 712 aa11.82□□□□□ -0.52
SNRPA1-208ENST00000559686 TBC1D16Q8TBP0 767 aa11.82□□□□□ -0.52
SNRPA1-208ENST00000559686 PNISRQ8TF01 805 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-208ENST00000559686 ZC3H12CQ9C0D7 883 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-208ENST00000559686 SZT2Q5T011 3432 aa11.82□□□□□ -0.52
SNRPA1-208ENST00000559686 DLL1O00548 723 aa11.81□□□□□ -0.52
SNRPA1-208ENST00000559686 UFL1O94874 794 aa11.81□□□□□ -0.52
SNRPA1-208ENST00000559686 SREBF2Q12772 1141 aa11.81□□□□□ -0.52
SNRPA1-208ENST00000559686 PDIA6Q15084 440 aa11.81□□□□□ -0.52
SNRPA1-208ENST00000559686 RSBN1LQ6PCB5 846 aaPredicted RBP11.81□□□□□ -0.52
SNRPA1-208ENST00000559686 COPS6Q7L5N1 327 aa11.81□□□□□ -0.52
SNRPA1-208ENST00000559686 OTOP1Q7RTM1 612 aa11.81□□□□□ -0.52
SNRPA1-208ENST00000559686 XAGE3Q8WTP9 111 aa11.81□□□□□ -0.52
SNRPA1-208ENST00000559686 MYOZ2Q9NPC6 264 aa11.81□□□□□ -0.52
SNRPA1-208ENST00000559686 RBBP6Q7Z6E9 1792 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-208ENST00000559686 MYCP01106 439 aaPredicted RBP11.8□□□□□ -0.52
SNRPA1-208ENST00000559686 ZNF280AP59817 542 aaPredicted RBP11.8□□□□□ -0.52
SNRPA1-208ENST00000559686 PTPN12Q05209 780 aaKnown RBP11.8□□□□□ -0.52
SNRPA1-208ENST00000559686 NBPF9Q3BBW0 867 aa11.8□□□□□ -0.52
SNRPA1-208ENST00000559686 HSP90AB3PQ58FF7 597 aa11.8□□□□□ -0.52
SNRPA1-208ENST00000559686 LRP10Q7Z4F1 713 aa11.8□□□□□ -0.52
SNRPA1-208ENST00000559686 FAM89AQ96GI7 184 aa11.8□□□□□ -0.52
SNRPA1-208ENST00000559686 FZD1Q9UP38 647 aa11.8□□□□□ -0.52
SNRPA1-208ENST00000559686 ERBB4Q15303 1308 aa11.8□□□□□ -0.52
SNRPA1-208ENST00000559686 ATP5J2-PTCD1G3V325 749 aa11.79□□□□□ -0.52
SNRPA1-208ENST00000559686 NEFMP07197 916 aa11.79□□□□□ -0.52
SNRPA1-208ENST00000559686 USP17L8P0C7I0 530 aa11.79□□□□□ -0.52
SNRPA1-208ENST00000559686 TCIRG1Q13488 830 aa11.79□□□□□ -0.52
SNRPA1-208ENST00000559686 NOM1Q5C9Z4 860 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms