RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 ROCK2O75116 1388 aaKnown RBP9.64□□□□□ -0.87
ZEB1-216ENST00000559496 RPGRIP1LQ68CZ1 1315 aa9.64□□□□□ -0.87
ZEB1-216ENST00000559496 C3P01024 1663 aa9.63□□□□□ -0.87
ZEB1-216ENST00000559496 ATXN7O15265 892 aaPredicted RBP9.63□□□□□ -0.87
ZEB1-216ENST00000559496 ZDHHC1Q8WTX9 485 aa9.63□□□□□ -0.87
ZEB1-216ENST00000559496 PPP1R12CQ9BZL4 782 aa9.63□□□□□ -0.87
ZEB1-216ENST00000559496 RBM19Q9Y4C8 960 aaKnown RBP9.63□□□□□ -0.87
ZEB1-216ENST00000559496 PPLO60437 1756 aa9.63□□□□□ -0.87
ZEB1-216ENST00000559496 MYO5BQ9ULV0 1848 aa9.63□□□□□ -0.87
ZEB1-216ENST00000559496 HSPA5P11021 654 aaKnown RBP9.63□□□□□ -0.87
ZEB1-216ENST00000559496 BMP4P12644 408 aa9.63□□□□□ -0.87
ZEB1-216ENST00000559496 NEDD1Q8NHV4 660 aa9.63□□□□□ -0.87
ZEB1-216ENST00000559496 HIRIP3Q9BW71 556 aaPredicted RBP9.63□□□□□ -0.87
ZEB1-216ENST00000559496 CARD11Q9BXL7 1154 aa9.63□□□□□ -0.87
ZEB1-216ENST00000559496 NEXMIFQ5QGS0 1516 aa9.62□□□□□ -0.87
ZEB1-216ENST00000559496 ADAMTSL3P82987 1691 aa9.62□□□□□ -0.87
ZEB1-216ENST00000559496 RIMS1Q86UR5 1692 aaKnown RBP9.62□□□□□ -0.87
ZEB1-216ENST00000559496 C2CD2LO14523 706 aa9.62□□□□□ -0.87
ZEB1-216ENST00000559496 DKK1O94907 266 aa9.62□□□□□ -0.87
ZEB1-216ENST00000559496 RASA1P20936 1047 aa9.62□□□□□ -0.87
ZEB1-216ENST00000559496 TXLNAP40222 546 aa9.62□□□□□ -0.87
ZEB1-216ENST00000559496 CEBPAP49715 358 aaPredicted RBP9.62□□□□□ -0.87
ZEB1-216ENST00000559496 CTBSQ01459 385 aa9.62□□□□□ -0.87
ZEB1-216ENST00000559496 TBCELQ5QJ74 424 aa9.62□□□□□ -0.87
ZEB1-216ENST00000559496 BICDL1Q6ZP65 573 aa9.62□□□□□ -0.87
ZEB1-216ENST00000559496 GDF2Q9UK05 429 aaPredicted RBP9.62□□□□□ -0.87
ZEB1-216ENST00000559496 ZNF232Q9UNY5 417 aa9.62□□□□□ -0.87
ZEB1-216ENST00000559496 GJA3Q9Y6H8 435 aa9.62□□□□□ -0.87
ZEB1-216ENST00000559496 DNMT3AQ9Y6K1 912 aaPredicted RBP9.62□□□□□ -0.87
ZEB1-216ENST00000559496 USP47Q96K76 1375 aa9.61□□□□□ -0.87
ZEB1-216ENST00000559496 NRXN1Q9ULB1 1477 aa9.61□□□□□ -0.87
ZEB1-216ENST00000559496 ADGRF5Q8IZF2 1346 aa9.61□□□□□ -0.87
ZEB1-216ENST00000559496 SERTM1A2A2V5 107 aa9.61□□□□□ -0.87
ZEB1-216ENST00000559496 C1orf229Q6ZS94 237 aaPredicted RBP9.61□□□□□ -0.87
ZEB1-216ENST00000559496 ZNF594Q96JF6 807 aaPredicted RBP9.61□□□□□ -0.87
ZEB1-216ENST00000559496 GPRASP1Q5JY77 1395 aa9.6□□□□□ -0.87
ZEB1-216ENST00000559496 LAMC1P11047 1609 aa9.6□□□□□ -0.87
ZEB1-216ENST00000559496 A2ML1A8K2U0 1454 aa9.6□□□□□ -0.87
ZEB1-216ENST00000559496 KIAA1210Q9ULL0 1709 aa9.6□□□□□ -0.87
ZEB1-216ENST00000559496 CNTNAP5Q8WYK1 1306 aa9.6□□□□□ -0.87
ZEB1-216ENST00000559496 SFI1A8K8P3 1242 aa9.6□□□□□ -0.87
ZEB1-216ENST00000559496 EML1O00423 815 aa9.6□□□□□ -0.87
ZEB1-216ENST00000559496 TNP2Q05952 138 aa9.6□□□□□ -0.87
ZEB1-216ENST00000559496 LARP1Q6PKG0 1096 aaKnown RBP9.6□□□□□ -0.87
ZEB1-216ENST00000559496 GOLGA6L1Q8N7Z2 621 aa9.6□□□□□ -0.87
ZEB1-216ENST00000559496 HCN2Q9UL51 889 aa9.6□□□□□ -0.87
ZEB1-216ENST00000559496 CHMP3Q9Y3E7 222 aa9.6□□□□□ -0.87
ZEB1-216ENST00000559496 GPC6Q9Y625 555 aaPredicted RBP9.6□□□□□ -0.87
ZEB1-216ENST00000559496 NLRP1Q9C000 1473 aa9.59□□□□□ -0.87
ZEB1-216ENST00000559496 SHISA8B8ZZ34 492 aa9.59□□□□□ -0.87
ZEB1-216ENST00000559496 MAPTP10636 758 aaKnown RBP9.59□□□□□ -0.87
ZEB1-216ENST00000559496 SAMD5Q5TGI4 173 aa9.59□□□□□ -0.87
ZEB1-216ENST00000559496 BEND7Q8N7W2 519 aaPredicted RBP9.59□□□□□ -0.87
ZEB1-216ENST00000559496 GALNT6Q8NCL4 622 aa9.59□□□□□ -0.87
ZEB1-216ENST00000559496 TSPAN10Q9H1Z9 355 aaPredicted RBP9.59□□□□□ -0.87
ZEB1-216ENST00000559496 PIK3C2GO75747 1445 aa9.58□□□□□ -0.88
ZEB1-216ENST00000559496 ZFYVE9O95405 1425 aa9.58□□□□□ -0.88
ZEB1-216ENST00000559496 PHF20L1A8MW92 1017 aa9.58□□□□□ -0.88
ZEB1-216ENST00000559496 KHNYNO15037 678 aaKnown RBP9.58□□□□□ -0.88
ZEB1-216ENST00000559496 FAM157BP0CG42 384 aa9.58□□□□□ -0.88
ZEB1-216ENST00000559496 SEC13P55735 322 aa9.58□□□□□ -0.88
ZEB1-216ENST00000559496 PSMA6P60900 246 aaKnown RBP9.58□□□□□ -0.88
ZEB1-216ENST00000559496 FAM182BQ5T319 152 aa9.58□□□□□ -0.88
ZEB1-216ENST00000559496 TSEN2Q8NCE0 465 aaKnown RBP9.58□□□□□ -0.88
ZEB1-216ENST00000559496 C7orf43Q8WVR3 580 aa9.58□□□□□ -0.88
ZEB1-216ENST00000559496 NEUROD4Q9HD90 331 aa9.58□□□□□ -0.88
ZEB1-216ENST00000559496 KDM5AP29375 1690 aaKnown RBP9.58□□□□□ -0.88
ZEB1-216ENST00000559496 RIMS2Q9UQ26 1411 aa9.57□□□□□ -0.88
ZEB1-216ENST00000559496 DCDC2BA2VCK2 349 aa9.57□□□□□ -0.88
ZEB1-216ENST00000559496 LMOD1P29536 600 aaPredicted RBP9.57□□□□□ -0.88
ZEB1-216ENST00000559496 CFAP70Q5T0N1 1121 aa9.57□□□□□ -0.88
ZEB1-216ENST00000559496 C1orf53Q5VUE5 145 aa9.57□□□□□ -0.88
ZEB1-216ENST00000559496 POTEAQ6S8J7 498 aa9.57□□□□□ -0.88
ZEB1-216ENST00000559496 SLCO4C1Q6ZQN7 724 aa9.57□□□□□ -0.88
ZEB1-216ENST00000559496 EDARADDQ8WWZ3 215 aa9.57□□□□□ -0.88
ZEB1-216ENST00000559496 VRTNQ9H8Y1 702 aa9.57□□□□□ -0.88
ZEB1-216ENST00000559496 UBR1Q8IWV7 1749 aa9.57□□□□□ -0.88
ZEB1-216ENST00000559496 ARAFP10398 606 aa9.56□□□□□ -0.88
ZEB1-216ENST00000559496 HIRAP54198 1017 aaPredicted RBP9.56□□□□□ -0.88
ZEB1-216ENST00000559496 SH3PXD2AQ5TCZ1 1133 aa9.56□□□□□ -0.88
ZEB1-216ENST00000559496 MYO3AQ8NEV4 1616 aa9.56□□□□□ -0.88
ZEB1-216ENST00000559496 SETBP1Q9Y6X0 1596 aa9.56□□□□□ -0.88
ZEB1-216ENST00000559496 SCAF11Q99590 1463 aaKnown RBP9.55□□□□□ -0.88
ZEB1-216ENST00000559496 PTK7Q13308 1070 aa9.55□□□□□ -0.88
ZEB1-216ENST00000559496 LAMC2Q13753 1193 aa9.55□□□□□ -0.88
ZEB1-216ENST00000559496 PODNQ7Z5L7 613 aa9.55□□□□□ -0.88
ZEB1-216ENST00000559496 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.55□□□□□ -0.88
ZEB1-216ENST00000559496 GAS2L2Q8NHY3 880 aa9.55□□□□□ -0.88
ZEB1-216ENST00000559496 C14orf93Q9H972 538 aaKnown RBP9.55□□□□□ -0.88
ZEB1-216ENST00000559496 GGA1Q9UJY5 639 aa9.55□□□□□ -0.88
ZEB1-216ENST00000559496 IQGAP1P46940 1657 aa9.55□□□□□ -0.88
ZEB1-216ENST00000559496 ATAD2Q6PL18 1390 aa9.54□□□□□ -0.88
ZEB1-216ENST00000559496 ST20-MTHFSA0A0A6YYL1 179 aa9.54□□□□□ -0.88
ZEB1-216ENST00000559496 CD33P20138 364 aa9.54□□□□□ -0.88
ZEB1-216ENST00000559496 SNRPNP63162 240 aaKnown RBP9.54□□□□□ -0.88
ZEB1-216ENST00000559496 CRTC2Q53ET0 693 aaPredicted RBP9.54□□□□□ -0.88
ZEB1-216ENST00000559496 LRRC69Q6ZNQ3 347 aa9.54□□□□□ -0.88
ZEB1-216ENST00000559496 STAG2Q8N3U4 1231 aa9.54□□□□□ -0.88
ZEB1-216ENST00000559496 RHPN1Q8TCX5 695 aa9.54□□□□□ -0.88
ZEB1-216ENST00000559496 MARK1Q9P0L2 795 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms