RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 C12orf49Q9H741 205 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 ELP3Q9H9T3 547 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 ZDHHC3Q9NYG2 299 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 RTCBQ9Y3I0 505 aaKnown RBP3.44□□□□□ -1.86
GABPB1-209ENST00000559100 GIPC1O14908 333 aa3.43□□□□□ -1.86
GABPB1-209ENST00000559100 PPM1GO15355 546 aaPredicted RBP3.43□□□□□ -1.86
GABPB1-209ENST00000559100 XYLBO75191 536 aa3.43□□□□□ -1.86
GABPB1-209ENST00000559100 POLR3DP05423 398 aaPredicted RBP3.43□□□□□ -1.86
GABPB1-209ENST00000559100 CTSHP09668 335 aa3.43□□□□□ -1.86
GABPB1-209ENST00000559100 CANXP27824 592 aaKnown RBP3.43□□□□□ -1.86
GABPB1-209ENST00000559100 CTSOP43234 321 aaPredicted RBP3.43□□□□□ -1.86
GABPB1-209ENST00000559100 ARID5AQ03989 594 aa3.43□□□□□ -1.86
GABPB1-209ENST00000559100 KRTAP1-1Q07627 177 aa3.43□□□□□ -1.86
GABPB1-209ENST00000559100 TAF1CQ15572 869 aaPredicted RBP3.43□□□□□ -1.86
GABPB1-209ENST00000559100 TTC39BQ5VTQ0 682 aaPredicted RBP3.43□□□□□ -1.86
GABPB1-209ENST00000559100 PDE12Q6L8Q7 609 aaKnown RBP3.43□□□□□ -1.86
GABPB1-209ENST00000559100 DPH6Q7L8W6 267 aa3.43□□□□□ -1.86
GABPB1-209ENST00000559100 ZNF295-AS1Q8N0V1 137 aa3.43□□□□□ -1.86
GABPB1-209ENST00000559100 PGBD3Q8N328 593 aa3.43□□□□□ -1.86
GABPB1-209ENST00000559100 CEP63Q96MT8 703 aa3.43□□□□□ -1.86
GABPB1-209ENST00000559100 TINF2Q9BSI4 451 aa3.43□□□□□ -1.86
GABPB1-209ENST00000559100 KLF16Q9BXK1 252 aaPredicted RBP3.43□□□□□ -1.86
GABPB1-209ENST00000559100 NPHS2Q9NP85 383 aa3.43□□□□□ -1.86
GABPB1-209ENST00000559100 PPP4R2Q9NY27 417 aa3.43□□□□□ -1.86
GABPB1-209ENST00000559100 FAM8A1Q9UBU6 413 aa3.43□□□□□ -1.86
GABPB1-209ENST00000559100 DDX41Q9UJV9 622 aaKnown RBP3.43□□□□□ -1.86
GABPB1-209ENST00000559100 GPC6Q9Y625 555 aaPredicted RBP3.43□□□□□ -1.86
GABPB1-209ENST00000559100 CAPN5O15484 640 aaPredicted RBP3.42□□□□□ -1.86
GABPB1-209ENST00000559100 USP17L7P0C7H9 530 aa3.42□□□□□ -1.86
GABPB1-209ENST00000559100 RHOQP17081 205 aa3.42□□□□□ -1.86
GABPB1-209ENST00000559100 MAP3K10Q02779 954 aa3.42□□□□□ -1.86
GABPB1-209ENST00000559100 TRIP4Q15650 581 aaPredicted RBP3.42□□□□□ -1.86
GABPB1-209ENST00000559100 MEI1Q5TIA1 1274 aa3.42□□□□□ -1.86
GABPB1-209ENST00000559100 IER5Q5VY09 327 aa3.42□□□□□ -1.86
GABPB1-209ENST00000559100 NXPE4Q6UWF7 544 aa3.42□□□□□ -1.86
GABPB1-209ENST00000559100 LYSMD3Q7Z3D4 306 aa3.42□□□□□ -1.86
GABPB1-209ENST00000559100 LINC00528Q8N1L1 170 aa3.42□□□□□ -1.86
GABPB1-209ENST00000559100 SLC43A3Q8NBI5 491 aa3.42□□□□□ -1.86
GABPB1-209ENST00000559100 SPATA32Q96LK8 384 aa3.42□□□□□ -1.86
GABPB1-209ENST00000559100 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.42□□□□□ -1.86
GABPB1-209ENST00000559100 BCO2Q9BYV7 579 aa3.42□□□□□ -1.86
GABPB1-209ENST00000559100 OSBPL7Q9BZF2 842 aa3.42□□□□□ -1.86
GABPB1-209ENST00000559100 ZFYVE28Q9HCC9 887 aa3.42□□□□□ -1.86
GABPB1-209ENST00000559100 GPAMQ9HCL2 828 aa3.42□□□□□ -1.86
GABPB1-209ENST00000559100 TIMMDC1Q9NPL8 285 aa3.42□□□□□ -1.86
GABPB1-209ENST00000559100 TMEM63CQ9P1W3 806 aa3.42□□□□□ -1.86
GABPB1-209ENST00000559100 TTF2Q9UNY4 1162 aaKnown RBP3.42□□□□□ -1.86
GABPB1-209ENST00000559100 A0A1B0GTH6 734 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 A0A1W2PNR3 127 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 KRBA1A5PL33 1030 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 FIGNL2A6NMB9 653 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 SPATA31C2B4DYI2 1134 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 EREGO14944 169 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 SPINT1O43278 529 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 STK10O94804 968 aaKnown RBP3.41□□□□□ -1.86
GABPB1-209ENST00000559100 CES1P23141 567 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 MSX1P28360 303 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 GSTT1P30711 240 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 INPP5BP32019 993 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 SCARF1Q14162 830 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 RNFT1Q5M7Z0 435 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 KRT25Q7Z3Z0 450 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 PODNQ7Z5L7 613 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 KLRG1Q96E93 195 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 FMNL2Q96PY5 1086 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 ZIC5Q96T25 663 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 GAS2L1Q99501 681 aaPredicted RBP3.41□□□□□ -1.86
GABPB1-209ENST00000559100 EHD4Q9H223 541 aa3.41□□□□□ -1.86
GABPB1-209ENST00000559100 ABI2Q9NYB9 513 aaPredicted RBP3.41□□□□□ -1.86
GABPB1-209ENST00000559100 TMA7Q9Y2S6 64 aaKnown RBP3.41□□□□□ -1.86
GABPB1-209ENST00000559100 TTLL8A6PVC2 850 aa3.4□□□□□ -1.87
GABPB1-209ENST00000559100 F6X3S4 739 aa3.4□□□□□ -1.87
GABPB1-209ENST00000559100 NCLP19338 710 aaKnown RBP3.4□□□□□ -1.87
GABPB1-209ENST00000559100 ATP4AP20648 1035 aa3.4□□□□□ -1.87
GABPB1-209ENST00000559100 RACK1P63244 317 aaKnown RBP3.4□□□□□ -1.87
GABPB1-209ENST00000559100 CCDC85BQ15834 202 aaPredicted RBP3.4□□□□□ -1.87
GABPB1-209ENST00000559100 XKR5Q6UX68 686 aa3.4□□□□□ -1.87
GABPB1-209ENST00000559100 BEND7Q8N7W2 519 aaPredicted RBP3.4□□□□□ -1.87
GABPB1-209ENST00000559100 C1orf127Q8N9H9 656 aa3.4□□□□□ -1.87
GABPB1-209ENST00000559100 RNF217Q8TC41 542 aa3.4□□□□□ -1.87
GABPB1-209ENST00000559100 PMEPA1Q969W9 287 aa3.4□□□□□ -1.87
GABPB1-209ENST00000559100 GPRASP2Q96D09 838 aa3.4□□□□□ -1.87
GABPB1-209ENST00000559100 PNMA5Q96PV4 448 aa3.4□□□□□ -1.87
GABPB1-209ENST00000559100 HIRIP3Q9BW71 556 aaPredicted RBP3.4□□□□□ -1.87
GABPB1-209ENST00000559100 LNPKQ9C0E8 428 aa3.4□□□□□ -1.87
GABPB1-209ENST00000559100 SRCIN1Q9C0H9 1055 aa3.4□□□□□ -1.87
GABPB1-209ENST00000559100 RUBCNLQ9H714 662 aa3.4□□□□□ -1.87
GABPB1-209ENST00000559100 ZSWIM4Q9H7M6 989 aa3.4□□□□□ -1.87
GABPB1-209ENST00000559100 BRD7Q9NPI1 651 aa3.4□□□□□ -1.87
GABPB1-209ENST00000559100 KANSL3Q9P2N6 904 aa3.4□□□□□ -1.87
GABPB1-209ENST00000559100 DMGDHQ9UI17 866 aaKnown RBP3.4□□□□□ -1.87
GABPB1-209ENST00000559100 TRAK1Q9UPV9 953 aa3.4□□□□□ -1.87
GABPB1-209ENST00000559100 KCNMB2Q9Y691 235 aa3.4□□□□□ -1.87
GABPB1-209ENST00000559100 USP31Q70CQ4 1352 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 SASH3O75995 380 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 SSBP05455 408 aaKnown RBP eCLIP3.39□□□□□ -1.87
GABPB1-209ENST00000559100 EDN3P14138 238 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 GBP2P32456 591 aaPredicted RBP3.39□□□□□ -1.87
GABPB1-209ENST00000559100 ST13P50502 369 aaKnown RBP3.39□□□□□ -1.87
GABPB1-209ENST00000559100 FCGRTP55899 365 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms