RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 ZNF428Q96B54 188 aa17.13■□□□□ 0.33
TMED3-205ENST00000558562 SMC4Q9NTJ3 1288 aa17.13■□□□□ 0.33
TMED3-205ENST00000558562 TAF1P21675 1872 aa17.12■□□□□ 0.33
TMED3-205ENST00000558562 EIF2S2P20042 333 aaKnown RBP17.12■□□□□ 0.33
TMED3-205ENST00000558562 PROSER3Q2NL68 480 aa17.12■□□□□ 0.33
TMED3-205ENST00000558562 FRAT1Q92837 279 aaPredicted RBP17.12■□□□□ 0.33
TMED3-205ENST00000558562 CCDC136Q96JN2 1154 aa17.12■□□□□ 0.33
TMED3-205ENST00000558562 FAM155AB1AL88 458 aaPredicted RBP17.11■□□□□ 0.33
TMED3-205ENST00000558562 CHL1O00533 1208 aa17.11■□□□□ 0.33
TMED3-205ENST00000558562 EGFRP00533 1210 aa17.11■□□□□ 0.33
TMED3-205ENST00000558562 PDE3AQ14432 1141 aa17.11■□□□□ 0.33
TMED3-205ENST00000558562 PDIA6Q15084 440 aa17.11■□□□□ 0.33
TMED3-205ENST00000558562 TBC1D10BQ4KMP7 808 aaPredicted RBP17.11■□□□□ 0.33
TMED3-205ENST00000558562 RGMBQ6NW40 437 aa17.11■□□□□ 0.33
TMED3-205ENST00000558562 DDX46Q7L014 1031 aaKnown RBP17.11■□□□□ 0.33
TMED3-205ENST00000558562 LRP10Q7Z4F1 713 aa17.11■□□□□ 0.33
TMED3-205ENST00000558562 KIF23Q02241 960 aaPredicted RBP17.1■□□□□ 0.33
TMED3-205ENST00000558562 ALDH1L2Q3SY69 923 aa17.1■□□□□ 0.33
TMED3-205ENST00000558562 RBM26Q5T8P6 1007 aaKnown RBP17.1■□□□□ 0.33
TMED3-205ENST00000558562 KRT26Q7Z3Y9 468 aa17.1■□□□□ 0.33
TMED3-205ENST00000558562 SSH1Q8WYL5 1049 aa17.1■□□□□ 0.33
TMED3-205ENST00000558562 ERBB4Q15303 1308 aa17.1■□□□□ 0.33
TMED3-205ENST00000558562 POLR2AP24928 1970 aaKnown RBP17.09■□□□□ 0.33
TMED3-205ENST00000558562 ADM5C9JUS6 153 aa17.09■□□□□ 0.33
TMED3-205ENST00000558562 PSMD14O00487 310 aa17.09■□□□□ 0.33
TMED3-205ENST00000558562 TRPA1O75762 1119 aa17.09■□□□□ 0.33
TMED3-205ENST00000558562 AIMP1Q12904 312 aaKnown RBP17.09■□□□□ 0.33
TMED3-205ENST00000558562 GRAPQ13588 217 aa17.09■□□□□ 0.33
TMED3-205ENST00000558562 NLRP10Q86W26 655 aa17.09■□□□□ 0.33
TMED3-205ENST00000558562 GRAPLQ8TC17 118 aaPredicted RBP17.09■□□□□ 0.33
TMED3-205ENST00000558562 NECTIN2Q92692 538 aa17.09■□□□□ 0.33
TMED3-205ENST00000558562 DBNDD1Q9H9R9 158 aa17.09■□□□□ 0.33
TMED3-205ENST00000558562 GBA2Q9HCG7 927 aaPredicted RBP17.09■□□□□ 0.33
TMED3-205ENST00000558562 KIF16BQ96L93 1317 aa17.09■□□□□ 0.33
TMED3-205ENST00000558562 DUOX1Q9NRD9 1551 aa17.09■□□□□ 0.33
TMED3-205ENST00000558562 ANKRD36CQ5JPF3 1778 aa17.09■□□□□ 0.33
TMED3-205ENST00000558562 RIMBP2O15034 1052 aa17.08■□□□□ 0.32
TMED3-205ENST00000558562 ZNF157P51786 506 aaPredicted RBP17.08■□□□□ 0.32
TMED3-205ENST00000558562 TWISTNBQ3B726 338 aaPredicted RBP17.08■□□□□ 0.32
TMED3-205ENST00000558562 ZKSCAN2Q63HK3 967 aa17.08■□□□□ 0.32
TMED3-205ENST00000558562 C2orf69Q8N8R5 385 aa17.08■□□□□ 0.32
TMED3-205ENST00000558562 KCNQ5Q9NR82 932 aa17.08■□□□□ 0.32
TMED3-205ENST00000558562 RNF186Q9NXI6 227 aa17.08■□□□□ 0.32
TMED3-205ENST00000558562 TRMT112Q9UI30 125 aaKnown RBP17.08■□□□□ 0.32
TMED3-205ENST00000558562 TSPYL4Q9UJ04 414 aa17.08■□□□□ 0.32
TMED3-205ENST00000558562 VAMP4O75379 141 aa17.07■□□□□ 0.32
TMED3-205ENST00000558562 WASHC4Q2M389 1173 aa17.07■□□□□ 0.32
TMED3-205ENST00000558562 COPS6Q7L5N1 327 aa17.07■□□□□ 0.32
TMED3-205ENST00000558562 TSPYL6Q8N831 410 aa17.07■□□□□ 0.32
TMED3-205ENST00000558562 C8orf58Q8NAV2 365 aa17.07■□□□□ 0.32
TMED3-205ENST00000558562 SAGE1Q9NXZ1 904 aa17.07■□□□□ 0.32
TMED3-205ENST00000558562 MS4A1P11836 297 aa17.06■□□□□ 0.32
TMED3-205ENST00000558562 XAGE3Q8WTP9 111 aa17.06■□□□□ 0.32
TMED3-205ENST00000558562 DPF2Q92785 391 aa17.06■□□□□ 0.32
TMED3-205ENST00000558562 CCDC102AQ96A19 550 aa17.06■□□□□ 0.32
TMED3-205ENST00000558562 DCPSQ96C86 337 aaKnown RBP17.06■□□□□ 0.32
TMED3-205ENST00000558562 NSFL1CQ9UNZ2 370 aaKnown RBP17.06■□□□□ 0.32
TMED3-205ENST00000558562 SH3TC1Q8TE82 1336 aa17.05■□□□□ 0.32
TMED3-205ENST00000558562 ELL2O00472 640 aaPredicted RBP17.05■□□□□ 0.32
TMED3-205ENST00000558562 DOK7Q18PE1 504 aa17.05■□□□□ 0.32
TMED3-205ENST00000558562 PANK1Q8TE04 598 aa17.05■□□□□ 0.32
TMED3-205ENST00000558562 ASTN2O75129 1339 aaPredicted RBP17.04■□□□□ 0.32
TMED3-205ENST00000558562 C6orf229H3BNL8 230 aa17.04■□□□□ 0.32
TMED3-205ENST00000558562 TCIRG1Q13488 830 aa17.04■□□□□ 0.32
TMED3-205ENST00000558562 HSP90AB3PQ58FF7 597 aa17.04■□□□□ 0.32
TMED3-205ENST00000558562 CSRNP1Q96S65 589 aa17.04■□□□□ 0.32
TMED3-205ENST00000558562 BABAM1Q9NWV8 329 aa17.04■□□□□ 0.32
TMED3-205ENST00000558562 TNNQ9UQP3 1299 aa17.04■□□□□ 0.32
TMED3-205ENST00000558562 AKAP11Q9UKA4 1901 aa17.04■□□□□ 0.32
TMED3-205ENST00000558562 RTL9Q8NET4 1388 aa17.03■□□□□ 0.32
TMED3-205ENST00000558562 IPO8O15397 1037 aaKnown RBP17.03■□□□□ 0.32
TMED3-205ENST00000558562 ECE2O60344 883 aa17.03■□□□□ 0.32
TMED3-205ENST00000558562 FTSJ3Q8IY81 847 aaKnown RBP17.03■□□□□ 0.32
TMED3-205ENST00000558562 MRPL50Q8N5N7 158 aaKnown RBP17.03■□□□□ 0.32
TMED3-205ENST00000558562 CELF1Q92879 486 aaKnown RBP17.03■□□□□ 0.32
TMED3-205ENST00000558562 POLLQ9UGP5 575 aa17.03■□□□□ 0.32
TMED3-205ENST00000558562 LRRC37AA6NMS7 1700 aa17.03■□□□□ 0.32
TMED3-205ENST00000558562 COL4A1P02462 1669 aa17.02■□□□□ 0.32
TMED3-205ENST00000558562 SLC10A3P09131 477 aa17.02■□□□□ 0.32
TMED3-205ENST00000558562 GPSM2P81274 684 aa17.02■□□□□ 0.32
TMED3-205ENST00000558562 KIF4BQ2VIQ3 1234 aa17.02■□□□□ 0.32
TMED3-205ENST00000558562 ATF7IPQ6VMQ6 1270 aa17.02■□□□□ 0.32
TMED3-205ENST00000558562 TMC4Q7Z404 712 aa17.02■□□□□ 0.32
TMED3-205ENST00000558562 DZIP1LQ8IYY4 767 aaKnown RBP17.02■□□□□ 0.32
TMED3-205ENST00000558562 GGA3Q9NZ52 723 aa17.02■□□□□ 0.32
TMED3-205ENST00000558562 NOB1Q9ULX3 412 aaKnown RBP17.02■□□□□ 0.32
TMED3-205ENST00000558562 COG6Q9Y2V7 657 aa17.02■□□□□ 0.32
TMED3-205ENST00000558562 CACNA1FO60840 1977 aa17.02■□□□□ 0.31
TMED3-205ENST00000558562 RLBP1P12271 317 aa17.01■□□□□ 0.31
TMED3-205ENST00000558562 RPS12P25398 132 aaKnown RBP17.01■□□□□ 0.31
TMED3-205ENST00000558562 KRT24Q2M2I5 525 aa17.01■□□□□ 0.31
TMED3-205ENST00000558562 CTU1Q7Z7A3 348 aaKnown RBP17.01■□□□□ 0.31
TMED3-205ENST00000558562 SULF1Q8IWU6 871 aa17.01■□□□□ 0.31
TMED3-205ENST00000558562 CLUAP1Q96AJ1 413 aa17.01■□□□□ 0.31
TMED3-205ENST00000558562 DDX60Q8IY21 1712 aaKnown RBP17.01■□□□□ 0.31
TMED3-205ENST00000558562 TRIM27P14373 513 aa17■□□□□ 0.31
TMED3-205ENST00000558562 RTL5Q5HYW3 569 aaPredicted RBP17■□□□□ 0.31
TMED3-205ENST00000558562 PRPF38BQ5VTL8 546 aaKnown RBP17■□□□□ 0.31
TMED3-205ENST00000558562 CDCA5Q96FF9 252 aa17■□□□□ 0.31
TMED3-205ENST00000558562 FAM89AQ96GI7 184 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms