RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 OXLD1Q5BKU9 147 aa9.47□□□□□ -0.89
TRPM1-206ENST00000558212 VASH1Q7L8A9 365 aaPredicted RBP9.47□□□□□ -0.89
TRPM1-206ENST00000558212 NLRP13Q86W25 1043 aa9.47□□□□□ -0.89
TRPM1-206ENST00000558212 PPARGC1BQ86YN6 1023 aaKnown RBP9.47□□□□□ -0.89
TRPM1-206ENST00000558212 DNAAF2Q9NVR5 837 aaKnown RBP9.47□□□□□ -0.89
TRPM1-206ENST00000558212 PCDHB11Q9Y5F2 797 aa9.47□□□□□ -0.89
TRPM1-206ENST00000558212 ACEP12821 1306 aa9.47□□□□□ -0.89
TRPM1-206ENST00000558212 ARHGEF28Q8N1W1 1705 aaKnown RBP9.46□□□□□ -0.89
TRPM1-206ENST00000558212 PATL2C9JE40 543 aaKnown RBP9.46□□□□□ -0.9
TRPM1-206ENST00000558212 ERVK-9P63128 1117 aa9.46□□□□□ -0.9
TRPM1-206ENST00000558212 GTF2IP78347 998 aa9.46□□□□□ -0.9
TRPM1-206ENST00000558212 USP4Q13107 963 aa9.46□□□□□ -0.9
TRPM1-206ENST00000558212 AEBP1Q8IUX7 1158 aa9.46□□□□□ -0.9
TRPM1-206ENST00000558212 MARCH10Q8NA82 808 aaPredicted RBP9.46□□□□□ -0.9
TRPM1-206ENST00000558212 PAPPAQ13219 1627 aa9.45□□□□□ -0.9
TRPM1-206ENST00000558212 ERVH48-1M5A8F1 160 aa9.45□□□□□ -0.9
TRPM1-206ENST00000558212 DPYDQ12882 1025 aa9.45□□□□□ -0.9
TRPM1-206ENST00000558212 SWI5Q1ZZU3 235 aa9.45□□□□□ -0.9
TRPM1-206ENST00000558212 TOM1L2Q6ZVM7 507 aa9.45□□□□□ -0.9
TRPM1-206ENST00000558212 CLP1Q92989 425 aaKnown RBP9.45□□□□□ -0.9
TRPM1-206ENST00000558212 TLL2Q9Y6L7 1015 aa9.45□□□□□ -0.9
TRPM1-206ENST00000558212 BRD4O60885 1362 aaPredicted RBP9.45□□□□□ -0.9
TRPM1-206ENST00000558212 ADH1CP00326 375 aa9.44□□□□□ -0.9
TRPM1-206ENST00000558212 SLC19A1P41440 591 aa9.44□□□□□ -0.9
TRPM1-206ENST00000558212 SCTRP47872 440 aa9.44□□□□□ -0.9
TRPM1-206ENST00000558212 SPRYD7Q5W111 196 aa9.44□□□□□ -0.9
TRPM1-206ENST00000558212 PHLDB3Q6NSJ2 640 aa9.44□□□□□ -0.9
TRPM1-206ENST00000558212 FAM200AQ8TCP9 573 aa9.44□□□□□ -0.9
TRPM1-206ENST00000558212 WDR17Q8IZU2 1322 aa9.44□□□□□ -0.9
TRPM1-206ENST00000558212 NHSQ6T4R5 1651 aa9.43□□□□□ -0.9
TRPM1-206ENST00000558212 SLIT3O75094 1523 aa9.43□□□□□ -0.9
TRPM1-206ENST00000558212 FSHRP23945 695 aa9.43□□□□□ -0.9
TRPM1-206ENST00000558212 ZNF594Q96JF6 807 aaPredicted RBP9.43□□□□□ -0.9
TRPM1-206ENST00000558212 CDK19Q9BWU1 502 aa9.43□□□□□ -0.9
TRPM1-206ENST00000558212 COL18A1P39060 1754 aa9.42□□□□□ -0.9
TRPM1-206ENST00000558212 COL24A1Q17RW2 1714 aa9.42□□□□□ -0.9
TRPM1-206ENST00000558212 GRIN3BO60391 1043 aa9.42□□□□□ -0.9
TRPM1-206ENST00000558212 HSPA6P17066 643 aa9.42□□□□□ -0.9
TRPM1-206ENST00000558212 POLD1P28340 1107 aa9.42□□□□□ -0.9
TRPM1-206ENST00000558212 SLC16A10Q8TF71 515 aa9.42□□□□□ -0.9
TRPM1-206ENST00000558212 MRGPRX2Q96LB1 330 aa9.42□□□□□ -0.9
TRPM1-206ENST00000558212 GNEQ9Y223 722 aaKnown RBP9.42□□□□□ -0.9
TRPM1-206ENST00000558212 QSER1Q2KHR3 1735 aa9.42□□□□□ -0.9
TRPM1-206ENST00000558212 TNS2Q63HR2 1409 aa9.41□□□□□ -0.9
TRPM1-206ENST00000558212 ATP10DQ9P241 1426 aa9.41□□□□□ -0.9
TRPM1-206ENST00000558212 EXOC5O00471 708 aa9.41□□□□□ -0.9
TRPM1-206ENST00000558212 SSFA2P28290 1259 aa9.41□□□□□ -0.9
TRPM1-206ENST00000558212 DHX9Q08211 1270 aaKnown RBP9.41□□□□□ -0.9
TRPM1-206ENST00000558212 NR5A1Q13285 461 aa9.41□□□□□ -0.9
TRPM1-206ENST00000558212 CCDC102BQ68D86 513 aa9.41□□□□□ -0.9
TRPM1-206ENST00000558212 B4GALNT3Q6L9W6 998 aa9.41□□□□□ -0.9
TRPM1-206ENST00000558212 CPSF1Q10570 1443 aaKnown RBP9.4□□□□□ -0.9
TRPM1-206ENST00000558212 M0R2N6 131 aa9.4□□□□□ -0.9
TRPM1-206ENST00000558212 SEC13P55735 322 aa9.4□□□□□ -0.9
TRPM1-206ENST00000558212 ZNF827Q17R98 1081 aa9.4□□□□□ -0.9
TRPM1-206ENST00000558212 CC2D2BQ6DHV5 1058 aa9.4□□□□□ -0.9
TRPM1-206ENST00000558212 CARD10Q9BWT7 1032 aa9.4□□□□□ -0.9
TRPM1-206ENST00000558212 OSBPL3Q9H4L5 887 aa9.4□□□□□ -0.9
TRPM1-206ENST00000558212 TRPM1Q7Z4N2 1603 aa9.4□□□□□ -0.9
TRPM1-206ENST00000558212 ABCC6O95255 1503 aa9.4□□□□□ -0.91
TRPM1-206ENST00000558212 PPIP5K1Q6PFW1 1433 aa9.39□□□□□ -0.91
TRPM1-206ENST00000558212 CCDC7Q96M83 1385 aa9.39□□□□□ -0.91
TRPM1-206ENST00000558212 LILRA1O75019 489 aa9.39□□□□□ -0.91
TRPM1-206ENST00000558212 NR3C2P08235 984 aa9.39□□□□□ -0.91
TRPM1-206ENST00000558212 ZNF598Q86UK7 904 aaKnown RBP9.39□□□□□ -0.91
TRPM1-206ENST00000558212 CCDC116Q8IYX3 515 aa9.39□□□□□ -0.91
TRPM1-206ENST00000558212 TPCN2Q8NHX9 752 aa9.39□□□□□ -0.91
TRPM1-206ENST00000558212 PKD2L1Q9P0L9 805 aa9.39□□□□□ -0.91
TRPM1-206ENST00000558212 BTAF1O14981 1849 aa9.38□□□□□ -0.91
TRPM1-206ENST00000558212 MYCP01106 439 aaPredicted RBP9.38□□□□□ -0.91
TRPM1-206ENST00000558212 YBX3P16989 372 aaKnown RBP eCLIP9.38□□□□□ -0.91
TRPM1-206ENST00000558212 RAB15P59190 212 aa9.38□□□□□ -0.91
TRPM1-206ENST00000558212 ARID5BQ14865 1188 aa9.38□□□□□ -0.91
TRPM1-206ENST00000558212 NLGN2Q8NFZ4 835 aa9.38□□□□□ -0.91
TRPM1-206ENST00000558212 C1orf216Q8TAB5 229 aa9.38□□□□□ -0.91
TRPM1-206ENST00000558212 DCAF11Q8TEB1 546 aa9.38□□□□□ -0.91
TRPM1-206ENST00000558212 TMPRSS4Q9NRS4 437 aa9.38□□□□□ -0.91
TRPM1-206ENST00000558212 PLA2G2EQ9NZK7 142 aa9.38□□□□□ -0.91
TRPM1-206ENST00000558212 V9GY48 417 aaPredicted RBP9.38□□□□□ -0.91
TRPM1-206ENST00000558212 USP6P35125 1406 aa9.38□□□□□ -0.91
TRPM1-206ENST00000558212 ADCY9O60503 1353 aa9.37□□□□□ -0.91
TRPM1-206ENST00000558212 PIK3C2AO00443 1686 aa9.37□□□□□ -0.91
TRPM1-206ENST00000558212 TMEM229AB2RXF0 380 aa9.37□□□□□ -0.91
TRPM1-206ENST00000558212 SCNN1DP51172 638 aa9.37□□□□□ -0.91
TRPM1-206ENST00000558212 OCLNQ16625 522 aa9.37□□□□□ -0.91
TRPM1-206ENST00000558212 PPP1R26Q5T8A7 1209 aaPredicted RBP9.37□□□□□ -0.91
TRPM1-206ENST00000558212 ZNF697Q5TEC3 545 aa9.37□□□□□ -0.91
TRPM1-206ENST00000558212 PNPLA7Q6ZV29 1317 aa9.36□□□□□ -0.91
TRPM1-206ENST00000558212 SLC27A3Q5K4L6 730 aa9.36□□□□□ -0.91
TRPM1-206ENST00000558212 ARHGEF25Q86VW2 580 aa9.36□□□□□ -0.91
TRPM1-206ENST00000558212 ACSBG1Q96GR2 724 aa9.36□□□□□ -0.91
TRPM1-206ENST00000558212 LRRC4BQ9NT99 713 aa9.36□□□□□ -0.91
TRPM1-206ENST00000558212 RGPD5Q99666 1765 aa9.36□□□□□ -0.91
TRPM1-206ENST00000558212 QRICH2Q9H0J4 1663 aa9.36□□□□□ -0.91
TRPM1-206ENST00000558212 KAT6BQ8WYB5 2073 aa9.35□□□□□ -0.91
TRPM1-206ENST00000558212 SFI1A8K8P3 1242 aa9.35□□□□□ -0.91
TRPM1-206ENST00000558212 KCNH5Q8NCM2 988 aa9.35□□□□□ -0.91
TRPM1-206ENST00000558212 IVNS1ABPQ9Y6Y0 642 aa9.35□□□□□ -0.91
TRPM1-206ENST00000558212 TUBGCP6Q96RT7 1819 aa9.35□□□□□ -0.91
TRPM1-206ENST00000558212 GDF9O60383 454 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms