RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 CEBPZQ03701 1054 aaKnown RBP13.87□□□□□ -0.19
VIPAS39-211ENST00000557658 THEMISQ8N1K5 641 aaPredicted RBP13.87□□□□□ -0.19
VIPAS39-211ENST00000557658 COL15A1P39059 1388 aa13.87□□□□□ -0.19
VIPAS39-211ENST00000557658 PHRF1Q9P1Y6 1649 aaKnown RBP13.87□□□□□ -0.19
VIPAS39-211ENST00000557658 PFKFB2O60825 505 aa13.86□□□□□ -0.19
VIPAS39-211ENST00000557658 SCRN1Q12765 414 aa13.86□□□□□ -0.19
VIPAS39-211ENST00000557658 PTPN14Q15678 1187 aa13.86□□□□□ -0.19
VIPAS39-211ENST00000557658 ATL3Q6DD88 541 aa13.86□□□□□ -0.19
VIPAS39-211ENST00000557658 ANO10Q9NW15 660 aa13.86□□□□□ -0.19
VIPAS39-211ENST00000557658 KINO60870 393 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-211ENST00000557658 CYP21A2P08686 494 aa13.86□□□□□ -0.19
VIPAS39-211ENST00000557658 HMGB1P09429 215 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-211ENST00000557658 SKILP12757 684 aa13.86□□□□□ -0.19
VIPAS39-211ENST00000557658 ADD1P35611 737 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-211ENST00000557658 MCMDC2Q4G0Z9 681 aa13.86□□□□□ -0.19
VIPAS39-211ENST00000557658 ZNF396Q96N95 335 aaPredicted RBP13.86□□□□□ -0.19
VIPAS39-211ENST00000557658 COPRSQ9NQ92 184 aa13.86□□□□□ -0.19
VIPAS39-211ENST00000557658 DBNLQ9UJU6 430 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-211ENST00000557658 SIPA1L3O60292 1781 aaPredicted RBP13.86□□□□□ -0.19
VIPAS39-211ENST00000557658 NEURL1BA8MQ27 555 aa13.85□□□□□ -0.19
VIPAS39-211ENST00000557658 DDX41Q9UJV9 622 aaKnown RBP13.85□□□□□ -0.19
VIPAS39-211ENST00000557658 ZNF609O15014 1411 aa13.85□□□□□ -0.19
VIPAS39-211ENST00000557658 GCKRQ14397 625 aa13.85□□□□□ -0.19
VIPAS39-211ENST00000557658 PDIA6Q15084 440 aa13.85□□□□□ -0.19
VIPAS39-211ENST00000557658 TNNI3KQ59H18 835 aa13.85□□□□□ -0.19
VIPAS39-211ENST00000557658 NYAP1Q6ZVC0 841 aa13.85□□□□□ -0.19
VIPAS39-211ENST00000557658 NSUN7Q8NE18 718 aaKnown RBP13.85□□□□□ -0.19
VIPAS39-211ENST00000557658 FPGT-TNNI3KV9GXZ4 949 aa13.85□□□□□ -0.19
VIPAS39-211ENST00000557658 CCDC69A6NI79 296 aa13.84□□□□□ -0.19
VIPAS39-211ENST00000557658 FAM160A1Q05DH4 1040 aa13.84□□□□□ -0.19
VIPAS39-211ENST00000557658 GABPB1Q06547 395 aaPredicted RBP13.84□□□□□ -0.19
VIPAS39-211ENST00000557658 NAA30Q147X3 362 aaPredicted RBP13.84□□□□□ -0.19
VIPAS39-211ENST00000557658 CCDC129Q6ZRS4 1044 aa13.84□□□□□ -0.19
VIPAS39-211ENST00000557658 CEP57L1Q8IYX8 460 aa13.84□□□□□ -0.19
VIPAS39-211ENST00000557658 GOLPH3LQ9H4A5 285 aa13.84□□□□□ -0.19
VIPAS39-211ENST00000557658 LAMA4Q16363 1823 aa13.84□□□□□ -0.19
VIPAS39-211ENST00000557658 SNW1Q13573 536 aaKnown RBP13.84□□□□□ -0.19
VIPAS39-211ENST00000557658 ARID5BQ14865 1188 aa13.84□□□□□ -0.19
VIPAS39-211ENST00000557658 EPHA10Q5JZY3 1008 aa13.84□□□□□ -0.19
VIPAS39-211ENST00000557658 DHX32Q7L7V1 743 aaKnown RBP13.84□□□□□ -0.19
VIPAS39-211ENST00000557658 FILIP1Q7Z7B0 1213 aa13.84□□□□□ -0.19
VIPAS39-211ENST00000557658 DNAJC2Q99543 621 aaKnown RBP13.84□□□□□ -0.19
VIPAS39-211ENST00000557658 LRRC2Q9BYS8 371 aa13.84□□□□□ -0.19
VIPAS39-211ENST00000557658 NAT10Q9H0A0 1025 aaKnown RBP13.84□□□□□ -0.19
VIPAS39-211ENST00000557658 KIF13AQ9H1H9 1805 aa13.84□□□□□ -0.19
VIPAS39-211ENST00000557658 PTPDC1A2A3K4 754 aa13.83□□□□□ -0.19
VIPAS39-211ENST00000557658 USP27XA6NNY8 438 aa13.83□□□□□ -0.19
VIPAS39-211ENST00000557658 PSME1Q06323 249 aa13.83□□□□□ -0.19
VIPAS39-211ENST00000557658 TFCP2Q12800 502 aa13.83□□□□□ -0.19
VIPAS39-211ENST00000557658 DHX40Q8IX18 779 aaKnown RBP13.83□□□□□ -0.19
VIPAS39-211ENST00000557658 ZNF397Q8NF99 534 aaPredicted RBP13.83□□□□□ -0.19
VIPAS39-211ENST00000557658 USP16Q9Y5T5 823 aa13.83□□□□□ -0.19
VIPAS39-211ENST00000557658 MORC2Q9Y6X9 1032 aaPredicted RBP13.83□□□□□ -0.19
VIPAS39-211ENST00000557658 KIF2AO00139 706 aaPredicted RBP13.83□□□□□ -0.2
VIPAS39-211ENST00000557658 GSDMDP57764 484 aa13.83□□□□□ -0.2
VIPAS39-211ENST00000557658 CCZ1BP86790 482 aa13.83□□□□□ -0.2
VIPAS39-211ENST00000557658 CCZ1P86791 482 aaPredicted RBP13.83□□□□□ -0.2
VIPAS39-211ENST00000557658 ENGASEQ8NFI3 743 aa13.83□□□□□ -0.2
VIPAS39-211ENST00000557658 KIF18AQ8NI77 898 aa13.83□□□□□ -0.2
VIPAS39-211ENST00000557658 USP28Q96RU2 1077 aa13.83□□□□□ -0.2
VIPAS39-211ENST00000557658 SEC62Q99442 399 aaKnown RBP13.83□□□□□ -0.2
VIPAS39-211ENST00000557658 MYD88Q99836 296 aa13.83□□□□□ -0.2
VIPAS39-211ENST00000557658 HAUS7Q99871 368 aa13.83□□□□□ -0.2
VIPAS39-211ENST00000557658 METTL22Q9BUU2 404 aaPredicted RBP13.83□□□□□ -0.2
VIPAS39-211ENST00000557658 FOSBP53539 338 aa13.82□□□□□ -0.2
VIPAS39-211ENST00000557658 FSIP1Q8NA03 581 aa13.82□□□□□ -0.2
VIPAS39-211ENST00000557658 FTOQ9C0B1 505 aaKnown RBP eCLIP13.82□□□□□ -0.2
VIPAS39-211ENST00000557658 KCND1Q9NSA2 647 aa13.82□□□□□ -0.2
VIPAS39-211ENST00000557658 ME1P48163 572 aa13.82□□□□□ -0.2
VIPAS39-211ENST00000557658 STOX1Q6ZVD7 989 aa13.82□□□□□ -0.2
VIPAS39-211ENST00000557658 ZNF771Q7L3S4 317 aaPredicted RBP13.82□□□□□ -0.2
VIPAS39-211ENST00000557658 CCAR2Q8N163 923 aaKnown RBP13.82□□□□□ -0.2
VIPAS39-211ENST00000557658 CHMP4CQ96CF2 233 aa13.82□□□□□ -0.2
VIPAS39-211ENST00000557658 ERO1AQ96HE7 468 aa13.82□□□□□ -0.2
VIPAS39-211ENST00000557658 ZNF215Q9UL58 517 aaPredicted RBP13.82□□□□□ -0.2
VIPAS39-211ENST00000557658 NDUFB9Q9Y6M9 179 aa13.82□□□□□ -0.2
VIPAS39-211ENST00000557658 SH3TC1Q8TE82 1336 aa13.82□□□□□ -0.2
VIPAS39-211ENST00000557658 CTDNEP1O95476 244 aa13.81□□□□□ -0.2
VIPAS39-211ENST00000557658 MYL6BP14649 208 aa13.81□□□□□ -0.2
VIPAS39-211ENST00000557658 RFX5P48382 616 aaPredicted RBP13.81□□□□□ -0.2
VIPAS39-211ENST00000557658 PTPN12Q05209 780 aaKnown RBP13.81□□□□□ -0.2
VIPAS39-211ENST00000557658 APOBRQ0VD83 1088 aa13.81□□□□□ -0.2
VIPAS39-211ENST00000557658 AOPEPQ8N6M6 819 aa13.81□□□□□ -0.2
VIPAS39-211ENST00000557658 XAGE3Q8WTP9 111 aa13.81□□□□□ -0.2
VIPAS39-211ENST00000557658 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.81□□□□□ -0.2
VIPAS39-211ENST00000557658 DDX46Q7L014 1031 aaKnown RBP13.81□□□□□ -0.2
VIPAS39-211ENST00000557658 ANKRD24Q8TF21 1146 aa13.81□□□□□ -0.2
VIPAS39-211ENST00000557658 DBNDD2Q9BQY9 259 aa13.81□□□□□ -0.2
VIPAS39-211ENST00000557658 IMPACTQ9P2X3 320 aa13.81□□□□□ -0.2
VIPAS39-211ENST00000557658 IGSF3O75054 1194 aa13.8□□□□□ -0.2
VIPAS39-211ENST00000557658 COPS6Q7L5N1 327 aa13.8□□□□□ -0.2
VIPAS39-211ENST00000557658 KBTBD3Q8NAB2 608 aa13.8□□□□□ -0.2
VIPAS39-211ENST00000557658 TRMT1Q9NXH9 659 aaKnown RBP13.8□□□□□ -0.2
VIPAS39-211ENST00000557658 CHGBP05060 677 aa13.8□□□□□ -0.2
VIPAS39-211ENST00000557658 CCT2P78371 535 aaKnown RBP13.8□□□□□ -0.2
VIPAS39-211ENST00000557658 ARHGEF25Q86VW2 580 aa13.8□□□□□ -0.2
VIPAS39-211ENST00000557658 KRT222Q8N1A0 295 aa13.8□□□□□ -0.2
VIPAS39-211ENST00000557658 MRPS27Q92552 414 aaKnown RBP13.8□□□□□ -0.2
VIPAS39-211ENST00000557658 AGXT2Q9BYV1 514 aa13.8□□□□□ -0.2
VIPAS39-211ENST00000557658 OSBPL5Q9H0X9 879 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms