RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 NPHP1O15259 732 aa12.22□□□□□ -0.45
SUPT16H-207ENST00000557394 POLR3GO15318 223 aaPredicted RBP12.22□□□□□ -0.45
SUPT16H-207ENST00000557394 IL13P35225 146 aa12.22□□□□□ -0.45
SUPT16H-207ENST00000557394 HSPA2P54652 639 aa12.22□□□□□ -0.45
SUPT16H-207ENST00000557394 GSDMDP57764 484 aa12.22□□□□□ -0.45
SUPT16H-207ENST00000557394 VPS53Q5VIR6 699 aa12.22□□□□□ -0.45
SUPT16H-207ENST00000557394 E4F1Q66K89 784 aaPredicted RBP12.22□□□□□ -0.45
SUPT16H-207ENST00000557394 OSBPL5Q9H0X9 879 aaPredicted RBP12.22□□□□□ -0.45
SUPT16H-207ENST00000557394 C1QBPQ07021 282 aaKnown RBP12.22□□□□□ -0.45
SUPT16H-207ENST00000557394 REXO1L1PQ8IX06 675 aa12.22□□□□□ -0.45
SUPT16H-207ENST00000557394 LARP6Q9BRS8 491 aaKnown RBP12.22□□□□□ -0.45
SUPT16H-207ENST00000557394 NWD1Q149M9 1564 aa12.22□□□□□ -0.45
SUPT16H-207ENST00000557394 PLEKHG2Q9H7P9 1386 aa12.21□□□□□ -0.45
SUPT16H-207ENST00000557394 ROBO2Q9HCK4 1378 aa12.21□□□□□ -0.45
SUPT16H-207ENST00000557394 GOLGA6L19H0YKK7 550 aa12.21□□□□□ -0.45
SUPT16H-207ENST00000557394 GUCY2CP25092 1073 aa12.21□□□□□ -0.45
SUPT16H-207ENST00000557394 EXOC4Q96A65 974 aa12.21□□□□□ -0.45
SUPT16H-207ENST00000557394 BORCS6Q96GS4 357 aa12.21□□□□□ -0.45
SUPT16H-207ENST00000557394 PPP1R13BQ96KQ4 1090 aa12.21□□□□□ -0.45
SUPT16H-207ENST00000557394 TM6SF1Q9BZW5 370 aa12.21□□□□□ -0.45
SUPT16H-207ENST00000557394 AMOTL2Q9Y2J4 779 aa12.21□□□□□ -0.45
SUPT16H-207ENST00000557394 CHMP3Q9Y3E7 222 aa12.21□□□□□ -0.45
SUPT16H-207ENST00000557394 USP16Q9Y5T5 823 aa12.21□□□□□ -0.45
SUPT16H-207ENST00000557394 NR1I2O75469 434 aa12.21□□□□□ -0.46
SUPT16H-207ENST00000557394 TBC1D8O95759 1140 aa12.21□□□□□ -0.46
SUPT16H-207ENST00000557394 GNAI2P04899 355 aa12.21□□□□□ -0.46
SUPT16H-207ENST00000557394 OAS2P29728 719 aaKnown RBP12.21□□□□□ -0.46
SUPT16H-207ENST00000557394 CCT4P50991 539 aaKnown RBP12.21□□□□□ -0.46
SUPT16H-207ENST00000557394 LEO1Q8WVC0 666 aaPredicted RBP12.21□□□□□ -0.46
SUPT16H-207ENST00000557394 KCNB2Q92953 911 aa12.21□□□□□ -0.46
SUPT16H-207ENST00000557394 NCAPGQ9BPX3 1015 aa12.21□□□□□ -0.46
SUPT16H-207ENST00000557394 IMPACTQ9P2X3 320 aa12.21□□□□□ -0.46
SUPT16H-207ENST00000557394 RRP15Q9Y3B9 282 aaKnown RBP12.21□□□□□ -0.46
SUPT16H-207ENST00000557394 TPM1P09493 284 aa12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 CASTP20810 708 aaKnown RBP12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 GYS2P54840 703 aa12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 ZKSCAN8Q15776 578 aaPredicted RBP12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 CCDC181Q5TID7 509 aa12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 CDC37L1Q7L3B6 337 aa12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 MSL3Q8N5Y2 521 aaKnown RBP12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 PIK3R5Q8WYR1 880 aa12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 SRRTQ9BXP5 876 aaKnown RBP12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 FAM83GA6ND36 823 aa12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 CHL1O00533 1208 aa12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 GIGYF1O75420 1035 aaPredicted RBP12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 TADA3O75528 432 aa12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 SASH3O75995 380 aa12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 ATP8B2P98198 1209 aa12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 CCDC158Q5M9N0 1113 aa12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 C11orf57Q6ZUT1 292 aaPredicted RBP12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 UBXN4Q92575 508 aa12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 SPATA32Q96LK8 384 aa12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 AK7Q96M32 723 aa12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 ZSWIM6Q9HCJ5 1215 aa12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 PNMA2Q9UL42 364 aa12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 PHLPP2Q6ZVD8 1323 aa12.2□□□□□ -0.46
SUPT16H-207ENST00000557394 GOLGA6L4A6NEF3 574 aa12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 PPFIA4O75335 1185 aa12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 SAFB2Q14151 953 aaKnown RBP eCLIP12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 SMC1AQ14683 1233 aaKnown RBP12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 LARP1BQ659C4 914 aaKnown RBP12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 WAPLQ7Z5K2 1190 aa12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 PGBD1Q96JS3 809 aa12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 MYCBPQ99417 103 aaPredicted RBP12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 PDRG1Q9NUG6 133 aa12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 CRYBG1Q9Y4K1 1723 aa12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 A0A1B0GUL7 405 aa12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 KIF4AO95239 1232 aa12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 PDCP20941 246 aa12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 SETDB1Q15047 1291 aa12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 STX1AQ16623 288 aa12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 ME3Q16798 604 aa12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 HDGFL2Q7Z4V5 671 aaPredicted RBP12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 GOLGA6L1Q8N7Z2 621 aa12.19□□□□□ -0.46
SUPT16H-207ENST00000557394 MINK1Q8N4C8 1332 aaPredicted RBP12.18□□□□□ -0.46
SUPT16H-207ENST00000557394 EFCAB8A8MWE9 144 aa12.18□□□□□ -0.46
SUPT16H-207ENST00000557394 SEC31AO94979 1220 aaKnown RBP12.18□□□□□ -0.46
SUPT16H-207ENST00000557394 GNAI3P08754 354 aa12.18□□□□□ -0.46
SUPT16H-207ENST00000557394 CPA1P15085 419 aa12.18□□□□□ -0.46
SUPT16H-207ENST00000557394 TSGA10IPQ3SY00 556 aa12.18□□□□□ -0.46
SUPT16H-207ENST00000557394 CC2D1AQ6P1N0 951 aaPredicted RBP12.18□□□□□ -0.46
SUPT16H-207ENST00000557394 FAM173BQ6P4H8 233 aa12.18□□□□□ -0.46
SUPT16H-207ENST00000557394 DHX40Q8IX18 779 aaKnown RBP12.18□□□□□ -0.46
SUPT16H-207ENST00000557394 PROCA1Q8NCQ7 364 aaPredicted RBP12.18□□□□□ -0.46
SUPT16H-207ENST00000557394 ZCCHC17Q9NP64 241 aaKnown RBP12.18□□□□□ -0.46
SUPT16H-207ENST00000557394 RPS6KA5O75582 802 aa12.17□□□□□ -0.46
SUPT16H-207ENST00000557394 ACTN2P35609 894 aa12.17□□□□□ -0.46
SUPT16H-207ENST00000557394 MAGEA9P43362 315 aa12.17□□□□□ -0.46
SUPT16H-207ENST00000557394 FOSBP53539 338 aa12.17□□□□□ -0.46
SUPT16H-207ENST00000557394 ETF1P62495 437 aaKnown RBP12.17□□□□□ -0.46
SUPT16H-207ENST00000557394 PI4K2BQ8TCG2 481 aa12.17□□□□□ -0.46
SUPT16H-207ENST00000557394 TMX1Q9H3N1 280 aa12.17□□□□□ -0.46
SUPT16H-207ENST00000557394 BSDC1Q9NW68 430 aaPredicted RBP12.17□□□□□ -0.46
SUPT16H-207ENST00000557394 JRKLQ9Y4A0 524 aa12.17□□□□□ -0.46
SUPT16H-207ENST00000557394 ADCY9O60503 1353 aa12.17□□□□□ -0.46
SUPT16H-207ENST00000557394 PNMA6EA0A0J9YXQ4 647 aa12.17□□□□□ -0.46
SUPT16H-207ENST00000557394 CTAGE5O15320 804 aa12.17□□□□□ -0.46
SUPT16H-207ENST00000557394 KCNA6P17658 529 aa12.17□□□□□ -0.46
SUPT16H-207ENST00000557394 DCTN1Q14203 1278 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 512.6 ms