RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 FEZ1Q99689 392 aa7.43□□□□□ -1.22
TDP1-215ENST00000556498 SENP7Q9BQF6 1050 aa7.43□□□□□ -1.22
TDP1-215ENST00000556498 POLR3CQ9BUI4 534 aaPredicted RBP7.43□□□□□ -1.22
TDP1-215ENST00000556498 IQSEC3Q9UPP2 1182 aaPredicted RBP7.43□□□□□ -1.22
TDP1-215ENST00000556498 PHLDB1Q86UU1 1377 aa7.43□□□□□ -1.22
TDP1-215ENST00000556498 CCDC189A1A4V9 331 aa7.42□□□□□ -1.22
TDP1-215ENST00000556498 IPO5O00410 1097 aaKnown RBP7.42□□□□□ -1.22
TDP1-215ENST00000556498 KIF5CO60282 957 aa7.42□□□□□ -1.22
TDP1-215ENST00000556498 GPC1P35052 558 aa7.42□□□□□ -1.22
TDP1-215ENST00000556498 SCNN1AP37088 669 aa7.42□□□□□ -1.22
TDP1-215ENST00000556498 MRE11P49959 708 aa7.42□□□□□ -1.22
TDP1-215ENST00000556498 RNF144AP50876 292 aaPredicted RBP7.42□□□□□ -1.22
TDP1-215ENST00000556498 FKBP5Q13451 457 aaPredicted RBP7.42□□□□□ -1.22
TDP1-215ENST00000556498 BIRC2Q13490 618 aa7.42□□□□□ -1.22
TDP1-215ENST00000556498 FILIP1LQ4L180 1135 aa7.42□□□□□ -1.22
TDP1-215ENST00000556498 CCDC73Q6ZRK6 1079 aa7.42□□□□□ -1.22
TDP1-215ENST00000556498 SLC9A9Q8IVB4 645 aa7.42□□□□□ -1.22
TDP1-215ENST00000556498 CHMP4CQ96CF2 233 aa7.42□□□□□ -1.22
TDP1-215ENST00000556498 EVI5LQ96CN4 794 aa7.42□□□□□ -1.22
TDP1-215ENST00000556498 AGAP3Q96P47 875 aa7.42□□□□□ -1.22
TDP1-215ENST00000556498 PURBQ96QR8 312 aaKnown RBP7.42□□□□□ -1.22
TDP1-215ENST00000556498 INSM2Q96T92 566 aaPredicted RBP7.42□□□□□ -1.22
TDP1-215ENST00000556498 ARPC5LQ9BPX5 153 aa7.42□□□□□ -1.22
TDP1-215ENST00000556498 GRIP2Q9C0E4 1043 aa7.42□□□□□ -1.22
TDP1-215ENST00000556498 DEF6Q9H4E7 631 aa7.42□□□□□ -1.22
TDP1-215ENST00000556498 IL16Q14005 1332 aa7.42□□□□□ -1.22
TDP1-215ENST00000556498 FOXO3O43524 673 aa7.41□□□□□ -1.22
TDP1-215ENST00000556498 NOP2P46087 812 aaKnown RBP7.41□□□□□ -1.22
TDP1-215ENST00000556498 LAPTM4AQ15012 233 aa7.41□□□□□ -1.22
TDP1-215ENST00000556498 HS1BP3Q53T59 392 aa7.41□□□□□ -1.22
TDP1-215ENST00000556498 TBCELQ5QJ74 424 aa7.41□□□□□ -1.22
TDP1-215ENST00000556498 MRPL14Q6P1L8 145 aaKnown RBP7.41□□□□□ -1.22
TDP1-215ENST00000556498 ZNF295-AS1Q8N0V1 137 aa7.41□□□□□ -1.22
TDP1-215ENST00000556498 CRIPAKQ8N1N5 446 aa7.41□□□□□ -1.22
TDP1-215ENST00000556498 STAG2Q8N3U4 1231 aa7.41□□□□□ -1.22
TDP1-215ENST00000556498 SAMD3Q8N6K7 520 aa7.41□□□□□ -1.22
TDP1-215ENST00000556498 TMC1Q8TDI8 760 aa7.41□□□□□ -1.22
TDP1-215ENST00000556498 ZSCAN10Q96SZ4 725 aaPredicted RBP7.41□□□□□ -1.22
TDP1-215ENST00000556498 IGSF5Q9NSI5 407 aa7.41□□□□□ -1.22
TDP1-215ENST00000556498 SWAP70Q9UH65 585 aa7.41□□□□□ -1.22
TDP1-215ENST00000556498 SUFUQ9UMX1 484 aa7.41□□□□□ -1.22
TDP1-215ENST00000556498 USP3Q9Y6I4 520 aa7.41□□□□□ -1.22
TDP1-215ENST00000556498 IVNS1ABPQ9Y6Y0 642 aa7.41□□□□□ -1.22
TDP1-215ENST00000556498 TMCO5BA8MYB1 307 aa7.4□□□□□ -1.22
TDP1-215ENST00000556498 PPP1R12BO60237 982 aaPredicted RBP7.4□□□□□ -1.22
TDP1-215ENST00000556498 PPFIA2O75334 1257 aa7.4□□□□□ -1.22
TDP1-215ENST00000556498 HSP90AB1P08238 724 aaKnown RBP7.4□□□□□ -1.22
TDP1-215ENST00000556498 BMP2P12643 396 aa7.4□□□□□ -1.22
TDP1-215ENST00000556498 CAPN2P17655 700 aa7.4□□□□□ -1.22
TDP1-215ENST00000556498 PAX3P23760 479 aa7.4□□□□□ -1.22
TDP1-215ENST00000556498 CTSOP43234 321 aaPredicted RBP7.4□□□□□ -1.22
TDP1-215ENST00000556498 IRX1P78414 480 aaPredicted RBP7.4□□□□□ -1.22
TDP1-215ENST00000556498 ZSCAN26Q16670 478 aa7.4□□□□□ -1.22
TDP1-215ENST00000556498 AMOTQ4VCS5 1084 aa7.4□□□□□ -1.22
TDP1-215ENST00000556498 OTUD6AQ7L8S5 288 aa7.4□□□□□ -1.22
TDP1-215ENST00000556498 CATIPQ7Z7H3 387 aa7.4□□□□□ -1.22
TDP1-215ENST00000556498 NBPF15Q8N660 670 aa7.4□□□□□ -1.22
TDP1-215ENST00000556498 FAM184AQ8NB25 1140 aa7.4□□□□□ -1.22
TDP1-215ENST00000556498 SYAP1Q96A49 352 aaPredicted RBP7.4□□□□□ -1.22
TDP1-215ENST00000556498 COL26A1Q96A83 441 aa7.4□□□□□ -1.22
TDP1-215ENST00000556498 AXIN1O15169 862 aa7.39□□□□□ -1.23
TDP1-215ENST00000556498 RAB11FIP3O75154 756 aa7.39□□□□□ -1.23
TDP1-215ENST00000556498 PSMA6P60900 246 aaKnown RBP7.39□□□□□ -1.23
TDP1-215ENST00000556498 TRAF1Q13077 416 aa7.39□□□□□ -1.23
TDP1-215ENST00000556498 TMED1Q13445 227 aa7.39□□□□□ -1.23
TDP1-215ENST00000556498 SCARF1Q14162 830 aa7.39□□□□□ -1.23
TDP1-215ENST00000556498 TEAD4Q15561 434 aa7.39□□□□□ -1.23
TDP1-215ENST00000556498 SLC27A3Q5K4L6 730 aa7.39□□□□□ -1.23
TDP1-215ENST00000556498 C6orf118Q5T5N4 469 aa7.39□□□□□ -1.23
TDP1-215ENST00000556498 TMEM214Q6NUQ4 689 aaKnown RBP7.39□□□□□ -1.23
TDP1-215ENST00000556498 POTEAQ6S8J7 498 aa7.39□□□□□ -1.23
TDP1-215ENST00000556498 CAPN12Q6ZSI9 719 aa7.39□□□□□ -1.23
TDP1-215ENST00000556498 TRIM46Q7Z4K8 759 aa7.39□□□□□ -1.23
TDP1-215ENST00000556498 PDCL2Q8N4E4 241 aa7.39□□□□□ -1.23
TDP1-215ENST00000556498 CHMP7Q8WUX9 453 aaPredicted RBP7.39□□□□□ -1.23
TDP1-215ENST00000556498 RMDN2Q96LZ7 410 aa7.39□□□□□ -1.23
TDP1-215ENST00000556498 C2orf49Q9BVC5 232 aaPredicted RBP7.39□□□□□ -1.23
TDP1-215ENST00000556498 C22orf23Q9BZE7 217 aa7.39□□□□□ -1.23
TDP1-215ENST00000556498 IQCGQ9H095 443 aaKnown RBP7.39□□□□□ -1.23
TDP1-215ENST00000556498 UPF2Q9HAU5 1272 aaKnown RBP7.39□□□□□ -1.23
TDP1-215ENST00000556498 POLMQ9NP87 494 aaPredicted RBP7.39□□□□□ -1.23
TDP1-215ENST00000556498 WWC3Q9ULE0 1092 aa7.39□□□□□ -1.23
TDP1-215ENST00000556498 HTATSF1O43719 755 aaKnown RBP7.38□□□□□ -1.23
TDP1-215ENST00000556498 PTCD1O75127 700 aaKnown RBP7.38□□□□□ -1.23
TDP1-215ENST00000556498 CCDC175P0C221 793 aa7.38□□□□□ -1.23
TDP1-215ENST00000556498 BMP1P13497 986 aa7.38□□□□□ -1.23
TDP1-215ENST00000556498 TCF3P15923 654 aa7.38□□□□□ -1.23
TDP1-215ENST00000556498 GSCP56915 257 aaPredicted RBP7.38□□□□□ -1.23
TDP1-215ENST00000556498 CCT2P78371 535 aaKnown RBP7.38□□□□□ -1.23
TDP1-215ENST00000556498 FMNL3Q8IVF7 1028 aa7.38□□□□□ -1.23
TDP1-215ENST00000556498 PIK3R5Q8WYR1 880 aa7.38□□□□□ -1.23
TDP1-215ENST00000556498 BHMTQ93088 406 aa7.38□□□□□ -1.23
TDP1-215ENST00000556498 RSPH9Q9H1X1 276 aaPredicted RBP7.38□□□□□ -1.23
TDP1-215ENST00000556498 RASSF4Q9H2L5 321 aa7.38□□□□□ -1.23
TDP1-215ENST00000556498 CXorf56Q9H5V9 222 aa7.38□□□□□ -1.23
TDP1-215ENST00000556498 FSD2A1L4K1 749 aa7.37□□□□□ -1.23
TDP1-215ENST00000556498 SERTM1A2A2V5 107 aa7.37□□□□□ -1.23
TDP1-215ENST00000556498 MAP4K4O95819 1239 aaPredicted RBP7.37□□□□□ -1.23
TDP1-215ENST00000556498 NBPF7P0C2Y1 421 aaPredicted RBP7.37□□□□□ -1.23
TDP1-215ENST00000556498 BDNFP23560 247 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms