RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 ZNF771Q7L3S4 317 aaPredicted RBP6.05□□□□□ -1.44
TMEM260-210ENST00000556422 DISP2A7MBM2 1401 aa6.05□□□□□ -1.44
TMEM260-210ENST00000556422 AHDC1Q5TGY3 1603 aaPredicted RBP6.05□□□□□ -1.44
TMEM260-210ENST00000556422 ERVV-2B6SEH9 535 aa6.05□□□□□ -1.44
TMEM260-210ENST00000556422 SGSM2O43147 1006 aa6.05□□□□□ -1.44
TMEM260-210ENST00000556422 CYP2E1P05181 493 aaPredicted RBP6.05□□□□□ -1.44
TMEM260-210ENST00000556422 RFX5P48382 616 aaPredicted RBP6.05□□□□□ -1.44
TMEM260-210ENST00000556422 PKP1Q13835 747 aa6.05□□□□□ -1.44
TMEM260-210ENST00000556422 ACRBPQ8NEB7 543 aa6.05□□□□□ -1.44
TMEM260-210ENST00000556422 CXorf38Q8TB03 319 aa6.05□□□□□ -1.44
TMEM260-210ENST00000556422 EAF2Q96CJ1 260 aaPredicted RBP6.05□□□□□ -1.44
TMEM260-210ENST00000556422 TLR7Q9NYK1 1049 aaKnown RBP6.05□□□□□ -1.44
TMEM260-210ENST00000556422 RABL6Q3YEC7 729 aaPredicted RBP6.04□□□□□ -1.44
TMEM260-210ENST00000556422 JARID2Q92833 1246 aaPredicted RBP6.04□□□□□ -1.44
TMEM260-210ENST00000556422 MTA3Q9BTC8 594 aa6.04□□□□□ -1.44
TMEM260-210ENST00000556422 ANO2Q9NQ90 1003 aa6.04□□□□□ -1.44
TMEM260-210ENST00000556422 TCHHQ07283 1943 aa6.04□□□□□ -1.44
TMEM260-210ENST00000556422 ATXN8OSP0DMR3 200 aa6.04□□□□□ -1.44
TMEM260-210ENST00000556422 ANKRD36CQ5JPF3 1778 aa6.04□□□□□ -1.44
TMEM260-210ENST00000556422 CLEC17AQ6ZS10 378 aa6.04□□□□□ -1.44
TMEM260-210ENST00000556422 NRAPQ86VF7 1730 aa6.04□□□□□ -1.44
TMEM260-210ENST00000556422 CLASRPQ8N2M8 674 aaKnown RBP6.04□□□□□ -1.44
TMEM260-210ENST00000556422 ZGPATQ8N5A5 531 aaKnown RBP6.04□□□□□ -1.44
TMEM260-210ENST00000556422 RAD50Q92878 1312 aa6.04□□□□□ -1.44
TMEM260-210ENST00000556422 STRN4Q9NRL3 753 aa6.04□□□□□ -1.44
TMEM260-210ENST00000556422 LRP6O75581 1613 aa6.04□□□□□ -1.44
TMEM260-210ENST00000556422 ERBB4Q15303 1308 aa6.04□□□□□ -1.44
TMEM260-210ENST00000556422 GLRX3O76003 335 aaKnown RBP6.04□□□□□ -1.44
TMEM260-210ENST00000556422 HSPA4P34932 840 aa6.04□□□□□ -1.44
TMEM260-210ENST00000556422 NEXNQ0ZGT2 675 aa6.04□□□□□ -1.44
TMEM260-210ENST00000556422 PLBD2Q8NHP8 589 aa6.04□□□□□ -1.44
TMEM260-210ENST00000556422 TSPAN18Q96SJ8 248 aa6.04□□□□□ -1.44
TMEM260-210ENST00000556422 LSG1Q9H089 658 aaKnown RBP6.04□□□□□ -1.44
TMEM260-210ENST00000556422 DOT1LQ8TEK3 1739 aa6.04□□□□□ -1.44
TMEM260-210ENST00000556422 ATP5J2-PTCD1G3V325 749 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 EPB41L2O43491 1005 aaKnown RBP6.03□□□□□ -1.44
TMEM260-210ENST00000556422 PTCD1O75127 700 aaKnown RBP6.03□□□□□ -1.44
TMEM260-210ENST00000556422 GTF2A1P52655 376 aaPredicted RBP6.03□□□□□ -1.44
TMEM260-210ENST00000556422 PTPN12Q05209 780 aaKnown RBP6.03□□□□□ -1.44
TMEM260-210ENST00000556422 KRBA2Q6ZNG9 492 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 TTLL7Q6ZT98 887 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 MSL3Q8N5Y2 521 aaKnown RBP6.03□□□□□ -1.44
TMEM260-210ENST00000556422 CCDC94Q9BW85 323 aaPredicted RBP6.03□□□□□ -1.44
TMEM260-210ENST00000556422 TSPYL1Q9H0U9 437 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 SIL1Q9H173 461 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 ECHDC1Q9NTX5 307 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 MYH3P11055 1940 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 ST18O60284 1047 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 A1BGP04217 495 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 IRX5P78411 483 aaPredicted RBP6.03□□□□□ -1.44
TMEM260-210ENST00000556422 ZKSCAN8Q15776 578 aaPredicted RBP6.03□□□□□ -1.44
TMEM260-210ENST00000556422 UBE3BQ7Z3V4 1068 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 AACSQ86V21 672 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 ERC1Q8IUD2 1116 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 CNTROBQ8N137 903 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 COPRSQ9NQ92 184 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 NUP98P52948 1817 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 NEK4P51957 841 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 ZFYVE27Q5T4F4 411 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 DDX54Q8TDD1 881 aaKnown RBP6.03□□□□□ -1.44
TMEM260-210ENST00000556422 MICAL1Q8TDZ2 1067 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 ZDHHC9Q9Y397 364 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 LTBP4Q8N2S1 1624 aa6.03□□□□□ -1.44
TMEM260-210ENST00000556422 TRAK2O60296 914 aa6.02□□□□□ -1.45
TMEM260-210ENST00000556422 CCDC172P0C7W6 258 aa6.02□□□□□ -1.45
TMEM260-210ENST00000556422 CWC27Q6UX04 472 aaKnown RBP6.02□□□□□ -1.45
TMEM260-210ENST00000556422 RPAINQ86UA6 219 aa6.02□□□□□ -1.45
TMEM260-210ENST00000556422 RASEFQ8IZ41 740 aa6.02□□□□□ -1.45
TMEM260-210ENST00000556422 EVI5LQ96CN4 794 aa6.02□□□□□ -1.45
TMEM260-210ENST00000556422 TMX3Q96JJ7 454 aa6.02□□□□□ -1.45
TMEM260-210ENST00000556422 BTG4Q9NY30 223 aa6.02□□□□□ -1.45
TMEM260-210ENST00000556422 CCDC66A2RUB6 948 aa6.02□□□□□ -1.45
TMEM260-210ENST00000556422 FOXO4P98177 505 aa6.02□□□□□ -1.45
TMEM260-210ENST00000556422 UPF3BQ9BZI7 483 aaKnown RBP6.02□□□□□ -1.45
TMEM260-210ENST00000556422 CCDC8Q9H0W5 538 aaPredicted RBP6.02□□□□□ -1.45
TMEM260-210ENST00000556422 A0A087WZG4 1122 aa6.02□□□□□ -1.45
TMEM260-210ENST00000556422 DDX11L8A8MPP1 907 aa6.02□□□□□ -1.45
TMEM260-210ENST00000556422 RIOK3O14730 519 aaKnown RBP6.02□□□□□ -1.45
TMEM260-210ENST00000556422 PAX3P23760 479 aa6.02□□□□□ -1.45
TMEM260-210ENST00000556422 CUL4AQ13619 759 aa6.02□□□□□ -1.45
TMEM260-210ENST00000556422 ISY1Q9ULR0 285 aaKnown RBP6.02□□□□□ -1.45
TMEM260-210ENST00000556422 EP400Q96L91 3159 aa6.02□□□□□ -1.45
TMEM260-210ENST00000556422 LAMA4Q16363 1823 aa6.02□□□□□ -1.45
TMEM260-210ENST00000556422 H7C1W4 665 aa6.01□□□□□ -1.45
TMEM260-210ENST00000556422 IFIT2P09913 472 aaKnown RBP6.01□□□□□ -1.45
TMEM260-210ENST00000556422 RHBDL3P58872 404 aa6.01□□□□□ -1.45
TMEM260-210ENST00000556422 PTH1RQ03431 593 aa6.01□□□□□ -1.45
TMEM260-210ENST00000556422 DBNLQ9UJU6 430 aaKnown RBP6.01□□□□□ -1.45
TMEM260-210ENST00000556422 SNX14Q9Y5W7 946 aa6.01□□□□□ -1.45
TMEM260-210ENST00000556422 PHLPP1O60346 1717 aa6.01□□□□□ -1.45
TMEM260-210ENST00000556422 BCL9O00512 1426 aa6.01□□□□□ -1.45
TMEM260-210ENST00000556422 FSD2A1L4K1 749 aa6.01□□□□□ -1.45
TMEM260-210ENST00000556422 G3BP1Q13283 466 aaKnown RBP eCLIP6.01□□□□□ -1.45
TMEM260-210ENST00000556422 BIRC2Q13490 618 aa6.01□□□□□ -1.45
TMEM260-210ENST00000556422 KIAA1211Q6ZU35 1233 aa6.01□□□□□ -1.45
TMEM260-210ENST00000556422 NME8Q8N427 588 aa6.01□□□□□ -1.45
TMEM260-210ENST00000556422 PIGBQ92521 554 aa6.01□□□□□ -1.45
TMEM260-210ENST00000556422 TTC14Q96N46 770 aa6.01□□□□□ -1.45
TMEM260-210ENST00000556422 SNRKQ9NRH2 765 aa6.01□□□□□ -1.45
TMEM260-210ENST00000556422 ASAP1Q9ULH1 1129 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms