RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 JDP2Q8WYK2 163 aa8.71□□□□□ -1.02
PSEN1-216ENST00000556066 NLRP3Q96P20 1036 aa8.71□□□□□ -1.02
PSEN1-216ENST00000556066 UTP14AQ9BVJ6 771 aaKnown RBP8.71□□□□□ -1.02
PSEN1-216ENST00000556066 TMX4Q9H1E5 349 aaPredicted RBP8.71□□□□□ -1.02
PSEN1-216ENST00000556066 CHPF2Q9P2E5 772 aa8.71□□□□□ -1.02
PSEN1-216ENST00000556066 ZNF541Q9H0D2 1346 aa8.71□□□□□ -1.02
PSEN1-216ENST00000556066 IBTKQ9P2D0 1353 aaPredicted RBP8.71□□□□□ -1.02
PSEN1-216ENST00000556066 IQCA1LA6NCM1 817 aa8.7□□□□□ -1.02
PSEN1-216ENST00000556066 ZNF316A6NFI3 1004 aaPredicted RBP8.7□□□□□ -1.02
PSEN1-216ENST00000556066 PPEF1O14829 653 aaPredicted RBP8.7□□□□□ -1.02
PSEN1-216ENST00000556066 HOXA10P31260 410 aaPredicted RBP8.7□□□□□ -1.02
PSEN1-216ENST00000556066 EAPPQ56P03 285 aaPredicted RBP8.7□□□□□ -1.02
PSEN1-216ENST00000556066 HSP90AB3PQ58FF7 597 aa8.7□□□□□ -1.02
PSEN1-216ENST00000556066 HDGFL1Q5TGJ6 251 aa8.7□□□□□ -1.02
PSEN1-216ENST00000556066 CC2D2BQ6DHV5 1058 aa8.7□□□□□ -1.02
PSEN1-216ENST00000556066 SLC51AQ86UW1 340 aa8.7□□□□□ -1.02
PSEN1-216ENST00000556066 CRAMP1Q96RY5 1269 aa8.7□□□□□ -1.02
PSEN1-216ENST00000556066 DDX21Q9NR30 783 aaKnown RBP eCLIP8.7□□□□□ -1.02
PSEN1-216ENST00000556066 WDR70Q9NW82 654 aa8.7□□□□□ -1.02
PSEN1-216ENST00000556066 RIC1Q4ADV7 1423 aa8.7□□□□□ -1.02
PSEN1-216ENST00000556066 APAF1O14727 1248 aa8.69□□□□□ -1.02
PSEN1-216ENST00000556066 HCLS1P14317 486 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-216ENST00000556066 DUSP27Q5VZP5 1158 aa8.69□□□□□ -1.02
PSEN1-216ENST00000556066 NLRP10Q86W26 655 aa8.69□□□□□ -1.02
PSEN1-216ENST00000556066 LARGE2Q8N3Y3 721 aa8.69□□□□□ -1.02
PSEN1-216ENST00000556066 PSMD1Q99460 953 aa8.69□□□□□ -1.02
PSEN1-216ENST00000556066 TAF1DQ9H5J8 278 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-216ENST00000556066 TRMT112Q9UI30 125 aaKnown RBP8.69□□□□□ -1.02
PSEN1-216ENST00000556066 GJA3Q9Y6H8 435 aa8.69□□□□□ -1.02
PSEN1-216ENST00000556066 RNF123Q5XPI4 1314 aa8.69□□□□□ -1.02
PSEN1-216ENST00000556066 ELL2O00472 640 aaPredicted RBP8.68□□□□□ -1.02
PSEN1-216ENST00000556066 FOXN1O15353 648 aa8.68□□□□□ -1.02
PSEN1-216ENST00000556066 SLC34A2O95436 690 aa8.68□□□□□ -1.02
PSEN1-216ENST00000556066 EPHX2P34913 555 aa8.68□□□□□ -1.02
PSEN1-216ENST00000556066 PBX2P40425 430 aa8.68□□□□□ -1.02
PSEN1-216ENST00000556066 EIF6P56537 245 aaKnown RBP8.68□□□□□ -1.02
PSEN1-216ENST00000556066 LSM11P83369 360 aaKnown RBP eCLIP8.68□□□□□ -1.02
PSEN1-216ENST00000556066 TCIRG1Q13488 830 aa8.68□□□□□ -1.02
PSEN1-216ENST00000556066 SLC10A5Q5PT55 438 aa8.68□□□□□ -1.02
PSEN1-216ENST00000556066 TMEM92Q6UXU6 159 aa8.68□□□□□ -1.02
PSEN1-216ENST00000556066 LDHDQ86WU2 507 aa8.68□□□□□ -1.02
PSEN1-216ENST00000556066 MBIPQ9NS73 344 aa8.68□□□□□ -1.02
PSEN1-216ENST00000556066 PODXL2Q9NZ53 605 aa8.68□□□□□ -1.02
PSEN1-216ENST00000556066 DBF4Q9UBU7 674 aaPredicted RBP8.68□□□□□ -1.02
PSEN1-216ENST00000556066 MKRN1Q9UHC7 482 aaKnown RBP8.68□□□□□ -1.02
PSEN1-216ENST00000556066 HACL1Q9UJ83 578 aa8.68□□□□□ -1.02
PSEN1-216ENST00000556066 DDX60Q8IY21 1712 aaKnown RBP8.68□□□□□ -1.02
PSEN1-216ENST00000556066 ATP5J2-PTCD1G3V325 749 aa8.67□□□□□ -1.02
PSEN1-216ENST00000556066 FZD9O00144 591 aa8.67□□□□□ -1.02
PSEN1-216ENST00000556066 ABCC4O15439 1325 aa8.67□□□□□ -1.02
PSEN1-216ENST00000556066 PPIP5K2O43314 1243 aa8.67□□□□□ -1.02
PSEN1-216ENST00000556066 HOXB7P09629 217 aa8.67□□□□□ -1.02
PSEN1-216ENST00000556066 PDE4AP27815 886 aa8.67□□□□□ -1.02
PSEN1-216ENST00000556066 COL4A5P29400 1685 aa8.67□□□□□ -1.02
PSEN1-216ENST00000556066 CALD1Q05682 793 aaKnown RBP8.67□□□□□ -1.02
PSEN1-216ENST00000556066 GRIPAP1Q4V328 841 aa8.67□□□□□ -1.02
PSEN1-216ENST00000556066 RTL5Q5HYW3 569 aaPredicted RBP8.67□□□□□ -1.02
PSEN1-216ENST00000556066 DDX46Q7L014 1031 aaKnown RBP8.67□□□□□ -1.02
PSEN1-216ENST00000556066 NIM1KQ8IY84 436 aa8.67□□□□□ -1.02
PSEN1-216ENST00000556066 GPC2Q8N158 579 aa8.67□□□□□ -1.02
PSEN1-216ENST00000556066 PLBD2Q8NHP8 589 aa8.67□□□□□ -1.02
PSEN1-216ENST00000556066 SH3TC1Q8TE82 1336 aa8.67□□□□□ -1.02
PSEN1-216ENST00000556066 SNED1Q8TER0 1413 aa8.67□□□□□ -1.02
PSEN1-216ENST00000556066 CRISPLD2Q9H0B8 497 aa8.67□□□□□ -1.02
PSEN1-216ENST00000556066 HYPKQ9NX55 129 aa8.67□□□□□ -1.02
PSEN1-216ENST00000556066 ATP6V0A2Q9Y487 856 aa8.67□□□□□ -1.02
PSEN1-216ENST00000556066 LMOD1P29536 600 aaPredicted RBP8.66□□□□□ -1.02
PSEN1-216ENST00000556066 GNAI1P63096 354 aa8.66□□□□□ -1.02
PSEN1-216ENST00000556066 AOC3Q16853 763 aa8.66□□□□□ -1.02
PSEN1-216ENST00000556066 TMEM132AQ24JP5 1023 aa8.66□□□□□ -1.02
PSEN1-216ENST00000556066 RIC3Q7Z5B4 369 aa8.66□□□□□ -1.02
PSEN1-216ENST00000556066 FAM89AQ96GI7 184 aa8.66□□□□□ -1.02
PSEN1-216ENST00000556066 PRDM10Q9NQV6 1147 aa8.66□□□□□ -1.02
PSEN1-216ENST00000556066 IFT57Q9NWB7 429 aa8.66□□□□□ -1.02
PSEN1-216ENST00000556066 CNTNAP1P78357 1384 aa8.65□□□□□ -1.02
PSEN1-216ENST00000556066 PASKQ96RG2 1323 aa8.65□□□□□ -1.02
PSEN1-216ENST00000556066 BBOX1O75936 387 aa8.65□□□□□ -1.02
PSEN1-216ENST00000556066 CCDC184Q52MB2 194 aa8.65□□□□□ -1.02
PSEN1-216ENST00000556066 DPP8Q6V1X1 898 aaPredicted RBP8.65□□□□□ -1.02
PSEN1-216ENST00000556066 PNMA8AQ86V59 439 aaPredicted RBP8.65□□□□□ -1.02
PSEN1-216ENST00000556066 SP8Q8IXZ3 490 aa8.65□□□□□ -1.02
PSEN1-216ENST00000556066 MPNDQ8N594 471 aa8.65□□□□□ -1.02
PSEN1-216ENST00000556066 SUPT20HQ8NEM7 779 aa8.65□□□□□ -1.02
PSEN1-216ENST00000556066 PLA2G2EQ9NZK7 142 aa8.65□□□□□ -1.02
PSEN1-216ENST00000556066 HCSTQ9UBK5 93 aa8.65□□□□□ -1.02
PSEN1-216ENST00000556066 LTBP1Q14766 1721 aa8.65□□□□□ -1.03
PSEN1-216ENST00000556066 ADAMTSL1Q8N6G6 1762 aa8.64□□□□□ -1.03
PSEN1-216ENST00000556066 ZNF853P0CG23 659 aa8.64□□□□□ -1.03
PSEN1-216ENST00000556066 VEGFBP49765 207 aa8.64□□□□□ -1.03
PSEN1-216ENST00000556066 GRAPQ13588 217 aa8.64□□□□□ -1.03
PSEN1-216ENST00000556066 MFSD10Q14728 455 aa8.64□□□□□ -1.03
PSEN1-216ENST00000556066 MAP1SQ66K74 1059 aaPredicted RBP8.64□□□□□ -1.03
PSEN1-216ENST00000556066 CNTROBQ8N137 903 aa8.64□□□□□ -1.03
PSEN1-216ENST00000556066 C8orf58Q8NAV2 365 aa8.64□□□□□ -1.03
PSEN1-216ENST00000556066 GRAPLQ8TC17 118 aaPredicted RBP8.64□□□□□ -1.03
PSEN1-216ENST00000556066 LARP6Q9BRS8 491 aaKnown RBP8.64□□□□□ -1.03
PSEN1-216ENST00000556066 ISCA1Q9BUE6 129 aa8.64□□□□□ -1.03
PSEN1-216ENST00000556066 PHAXQ9H814 394 aaKnown RBP8.64□□□□□ -1.03
PSEN1-216ENST00000556066 TMEM88BA6NKF7 163 aa8.63□□□□□ -1.03
PSEN1-216ENST00000556066 IRS4O14654 1257 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms