RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 TTLL11Q8NHH1 800 aa9.47□□□□□ -0.89
PCNX4-211ENST00000555929 RBM17Q96I25 401 aaKnown RBP9.47□□□□□ -0.89
PCNX4-211ENST00000555929 FHDC1Q9C0D6 1143 aaPredicted RBP9.47□□□□□ -0.89
PCNX4-211ENST00000555929 ZBTB40Q9NUA8 1239 aa9.47□□□□□ -0.89
PCNX4-211ENST00000555929 UTYO14607 1347 aa9.47□□□□□ -0.89
PCNX4-211ENST00000555929 IBTKQ9P2D0 1353 aaPredicted RBP9.47□□□□□ -0.89
PCNX4-211ENST00000555929 NUP98P52948 1817 aa9.47□□□□□ -0.89
PCNX4-211ENST00000555929 CACNA1FO60840 1977 aa9.46□□□□□ -0.89
PCNX4-211ENST00000555929 QSER1Q2KHR3 1735 aa9.46□□□□□ -0.89
PCNX4-211ENST00000555929 CASZ1Q86V15 1759 aa9.46□□□□□ -0.9
PCNX4-211ENST00000555929 SRGAP3O43295 1099 aa9.46□□□□□ -0.9
PCNX4-211ENST00000555929 ST18O60284 1047 aa9.46□□□□□ -0.9
PCNX4-211ENST00000555929 DPEP1P16444 411 aa9.46□□□□□ -0.9
PCNX4-211ENST00000555929 IFIT5Q13325 482 aaKnown RBP9.46□□□□□ -0.9
PCNX4-211ENST00000555929 CCDC57Q2TAC2 916 aa9.46□□□□□ -0.9
PCNX4-211ENST00000555929 FAM161AQ3B820 660 aa9.46□□□□□ -0.9
PCNX4-211ENST00000555929 ANKRD44Q8N8A2 993 aa9.46□□□□□ -0.9
PCNX4-211ENST00000555929 KAZALD1Q96I82 304 aa9.46□□□□□ -0.9
PCNX4-211ENST00000555929 PLA2G12BQ9BX93 195 aa9.46□□□□□ -0.9
PCNX4-211ENST00000555929 BCL11AQ9H165 835 aa9.46□□□□□ -0.9
PCNX4-211ENST00000555929 GREM2Q9H772 168 aa9.46□□□□□ -0.9
PCNX4-211ENST00000555929 SEC31BQ9NQW1 1179 aa9.46□□□□□ -0.9
PCNX4-211ENST00000555929 ANKRD18BA2A2Z9 1011 aa9.45□□□□□ -0.9
PCNX4-211ENST00000555929 NPR1P16066 1061 aa9.45□□□□□ -0.9
PCNX4-211ENST00000555929 ITGA6P23229 1130 aa9.45□□□□□ -0.9
PCNX4-211ENST00000555929 SF3B3Q15393 1217 aaKnown RBP9.45□□□□□ -0.9
PCNX4-211ENST00000555929 PDCD7Q8N8D1 485 aaKnown RBP9.45□□□□□ -0.9
PCNX4-211ENST00000555929 NLGN2Q8NFZ4 835 aa9.45□□□□□ -0.9
PCNX4-211ENST00000555929 MASTLQ96GX5 879 aa9.45□□□□□ -0.9
PCNX4-211ENST00000555929 ZNF594Q96JF6 807 aaPredicted RBP9.45□□□□□ -0.9
PCNX4-211ENST00000555929 CD2APQ9Y5K6 639 aa9.45□□□□□ -0.9
PCNX4-211ENST00000555929 CSF1RP07333 972 aa9.44□□□□□ -0.9
PCNX4-211ENST00000555929 SRGNP10124 158 aa9.44□□□□□ -0.9
PCNX4-211ENST00000555929 ALDH1B1P30837 517 aa9.44□□□□□ -0.9
PCNX4-211ENST00000555929 IGHMBP2P38935 993 aaKnown RBP9.44□□□□□ -0.9
PCNX4-211ENST00000555929 TGFB2P61812 414 aa9.44□□□□□ -0.9
PCNX4-211ENST00000555929 ATP8B2P98198 1209 aa9.44□□□□□ -0.9
PCNX4-211ENST00000555929 CEP85Q6P2H3 762 aa9.44□□□□□ -0.9
PCNX4-211ENST00000555929 ANKRD18AQ8IVF6 992 aa9.44□□□□□ -0.9
PCNX4-211ENST00000555929 KLHDC4Q8TBB5 520 aa9.44□□□□□ -0.9
PCNX4-211ENST00000555929 CDC5LQ99459 802 aaKnown RBP9.44□□□□□ -0.9
PCNX4-211ENST00000555929 MPHOSPH8Q99549 860 aa9.44□□□□□ -0.9
PCNX4-211ENST00000555929 SIL1Q9H173 461 aa9.44□□□□□ -0.9
PCNX4-211ENST00000555929 PDZRN3Q9UPQ7 1066 aa9.44□□□□□ -0.9
PCNX4-211ENST00000555929 C10orf71Q711Q0 1435 aa9.43□□□□□ -0.9
PCNX4-211ENST00000555929 PNMA6EA0A0J9YXQ4 647 aa9.43□□□□□ -0.9
PCNX4-211ENST00000555929 KLRG2A4D1S0 409 aaPredicted RBP9.43□□□□□ -0.9
PCNX4-211ENST00000555929 APBB1O00213 710 aa9.43□□□□□ -0.9
PCNX4-211ENST00000555929 HMMRO75330 724 aa9.43□□□□□ -0.9
PCNX4-211ENST00000555929 RPS8P62241 208 aaKnown RBP9.43□□□□□ -0.9
PCNX4-211ENST00000555929 OS9Q13438 667 aaPredicted RBP9.43□□□□□ -0.9
PCNX4-211ENST00000555929 GRAPQ13588 217 aa9.43□□□□□ -0.9
PCNX4-211ENST00000555929 RABL6Q3YEC7 729 aaPredicted RBP9.43□□□□□ -0.9
PCNX4-211ENST00000555929 CRY2Q49AN0 593 aa9.43□□□□□ -0.9
PCNX4-211ENST00000555929 RPAP2Q8IXW5 612 aaPredicted RBP9.43□□□□□ -0.9
PCNX4-211ENST00000555929 TTLL6Q8N841 843 aa9.43□□□□□ -0.9
PCNX4-211ENST00000555929 GRAPLQ8TC17 118 aaPredicted RBP9.43□□□□□ -0.9
PCNX4-211ENST00000555929 CELF1Q92879 486 aaKnown RBP9.43□□□□□ -0.9
PCNX4-211ENST00000555929 CNKSR1Q969H4 720 aa9.43□□□□□ -0.9
PCNX4-211ENST00000555929 SYT17Q9BSW7 474 aa9.43□□□□□ -0.9
PCNX4-211ENST00000555929 TMX4Q9H1E5 349 aaPredicted RBP9.43□□□□□ -0.9
PCNX4-211ENST00000555929 PIM2Q9P1W9 311 aa9.43□□□□□ -0.9
PCNX4-211ENST00000555929 PA2G4Q9UQ80 394 aaKnown RBP9.43□□□□□ -0.9
PCNX4-211ENST00000555929 PCDHB15Q9Y5E8 787 aa9.43□□□□□ -0.9
PCNX4-211ENST00000555929 AFDNP55196 1824 aaKnown RBP9.42□□□□□ -0.9
PCNX4-211ENST00000555929 G3V3G9 751 aa9.42□□□□□ -0.9
PCNX4-211ENST00000555929 SURF6O75683 361 aaKnown RBP9.42□□□□□ -0.9
PCNX4-211ENST00000555929 G3BP1Q13283 466 aaKnown RBP eCLIP9.42□□□□□ -0.9
PCNX4-211ENST00000555929 DALRD3Q5D0E6 543 aaKnown RBP9.42□□□□□ -0.9
PCNX4-211ENST00000555929 STYK1Q6J9G0 422 aa9.42□□□□□ -0.9
PCNX4-211ENST00000555929 LDHAL6AQ6ZMR3 332 aa9.42□□□□□ -0.9
PCNX4-211ENST00000555929 CDAN1Q8IWY9 1227 aa9.42□□□□□ -0.9
PCNX4-211ENST00000555929 CRAMP1Q96RY5 1269 aa9.42□□□□□ -0.9
PCNX4-211ENST00000555929 TMEM121BQ9BXQ6 578 aaPredicted RBP9.42□□□□□ -0.9
PCNX4-211ENST00000555929 CNNM1Q9NRU3 951 aa9.42□□□□□ -0.9
PCNX4-211ENST00000555929 BCS1LQ9Y276 419 aa9.42□□□□□ -0.9
PCNX4-211ENST00000555929 ANKRD36CQ5JPF3 1778 aa9.42□□□□□ -0.9
PCNX4-211ENST00000555929 PPEF1O14829 653 aaPredicted RBP9.41□□□□□ -0.9
PCNX4-211ENST00000555929 C21orf2O43822 256 aa9.41□□□□□ -0.9
PCNX4-211ENST00000555929 BBOX1O75936 387 aa9.41□□□□□ -0.9
PCNX4-211ENST00000555929 KCNA3P22001 575 aa9.41□□□□□ -0.9
PCNX4-211ENST00000555929 HOXA10P31260 410 aaPredicted RBP9.41□□□□□ -0.9
PCNX4-211ENST00000555929 AAMPQ13685 434 aa9.41□□□□□ -0.9
PCNX4-211ENST00000555929 PRPF40BQ6NWY9 871 aaKnown RBP9.41□□□□□ -0.9
PCNX4-211ENST00000555929 SIRT2Q8IXJ6 389 aa9.41□□□□□ -0.9
PCNX4-211ENST00000555929 PUS3Q9BZE2 481 aaKnown RBP9.41□□□□□ -0.9
PCNX4-211ENST00000555929 RWDD1Q9H446 243 aaPredicted RBP9.41□□□□□ -0.9
PCNX4-211ENST00000555929 COL24A1Q17RW2 1714 aa9.4□□□□□ -0.9
PCNX4-211ENST00000555929 RFX5P48382 616 aaPredicted RBP9.4□□□□□ -0.9
PCNX4-211ENST00000555929 PTPN12Q05209 780 aaKnown RBP9.4□□□□□ -0.9
PCNX4-211ENST00000555929 MTX1Q13505 466 aa9.4□□□□□ -0.9
PCNX4-211ENST00000555929 LRRC24Q50LG9 513 aa9.4□□□□□ -0.9
PCNX4-211ENST00000555929 OLFM4Q6UX06 510 aa9.4□□□□□ -0.9
PCNX4-211ENST00000555929 SLC51AQ86UW1 340 aa9.4□□□□□ -0.9
PCNX4-211ENST00000555929 HELBQ8NG08 1087 aaPredicted RBP9.4□□□□□ -0.9
PCNX4-211ENST00000555929 SSH3Q8TE77 659 aa9.4□□□□□ -0.9
PCNX4-211ENST00000555929 ANKIB1Q9P2G1 1089 aa9.4□□□□□ -0.9
PCNX4-211ENST00000555929 EXOC6BQ9Y2D4 811 aa9.4□□□□□ -0.9
PCNX4-211ENST00000555929 RIC1Q4ADV7 1423 aa9.39□□□□□ -0.91
PCNX4-211ENST00000555929 EYA2O00167 538 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms