RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 DLG5Q8TDM6 1919 aa8.74□□□□□ -1.01
SLIRP-204ENST00000555890 LAMA3Q16787 3333 aa8.74□□□□□ -1.01
SLIRP-204ENST00000555890 KIF13BQ9NQT8 1826 aa8.73□□□□□ -1.01
SLIRP-204ENST00000555890 ATRXP46100 2492 aa8.73□□□□□ -1.01
SLIRP-204ENST00000555890 TRANK1O15050 2925 aa8.73□□□□□ -1.01
SLIRP-204ENST00000555890 RGS20O76081 388 aa8.73□□□□□ -1.01
SLIRP-204ENST00000555890 NOGQ13253 232 aa8.73□□□□□ -1.01
SLIRP-204ENST00000555890 MAP1SQ66K74 1059 aaPredicted RBP8.73□□□□□ -1.01
SLIRP-204ENST00000555890 KCTD17Q8N5Z5 321 aa8.73□□□□□ -1.01
SLIRP-204ENST00000555890 POLR3EQ9NVU0 708 aa8.73□□□□□ -1.01
SLIRP-204ENST00000555890 HDAC9Q9UKV0 1011 aa8.73□□□□□ -1.01
SLIRP-204ENST00000555890 LAMB4A4D0S4 1761 aa8.73□□□□□ -1.01
SLIRP-204ENST00000555890 DOT1LQ8TEK3 1739 aa8.72□□□□□ -1.01
SLIRP-204ENST00000555890 LTN1O94822 1766 aa8.72□□□□□ -1.01
SLIRP-204ENST00000555890 N4BP2Q86UW6 1770 aaPredicted RBP8.72□□□□□ -1.01
SLIRP-204ENST00000555890 PLIN1O60240 522 aa8.72□□□□□ -1.01
SLIRP-204ENST00000555890 KRT37O76014 449 aa8.72□□□□□ -1.01
SLIRP-204ENST00000555890 OATP04181 439 aa8.72□□□□□ -1.01
SLIRP-204ENST00000555890 MMP10P09238 476 aa8.72□□□□□ -1.01
SLIRP-204ENST00000555890 HSP90AB2PQ58FF8 381 aa8.72□□□□□ -1.01
SLIRP-204ENST00000555890 SULT6B1Q6IMI4 303 aa8.72□□□□□ -1.01
SLIRP-204ENST00000555890 B4GALNT3Q6L9W6 998 aa8.72□□□□□ -1.01
SLIRP-204ENST00000555890 BANK1Q8NDB2 785 aa8.72□□□□□ -1.01
SLIRP-204ENST00000555890 HHIPL1Q96JK4 782 aa8.72□□□□□ -1.01
SLIRP-204ENST00000555890 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.72□□□□□ -1.012e-6■□□□□ 10.5
SLIRP-204ENST00000555890 C1QTNF1Q9BXJ1 281 aa8.72□□□□□ -1.01
SLIRP-204ENST00000555890 RPTORQ8N122 1335 aa8.72□□□□□ -1.01
SLIRP-204ENST00000555890 C5P01031 1676 aa8.72□□□□□ -1.01
SLIRP-204ENST00000555890 UBR3Q6ZT12 1888 aa8.71□□□□□ -1.01
SLIRP-204ENST00000555890 TRPA1O75762 1119 aa8.71□□□□□ -1.02
SLIRP-204ENST00000555890 DDNO94850 711 aaPredicted RBP8.71□□□□□ -1.02
SLIRP-204ENST00000555890 EN2P19622 333 aaPredicted RBP8.71□□□□□ -1.02
SLIRP-204ENST00000555890 CANXP27824 592 aaKnown RBP8.71□□□□□ -1.02
SLIRP-204ENST00000555890 EXOC6Q8TAG9 804 aa8.71□□□□□ -1.02
SLIRP-204ENST00000555890 ANKRD24Q8TF21 1146 aa8.71□□□□□ -1.02
SLIRP-204ENST00000555890 PHACTR3Q96KR7 559 aa8.71□□□□□ -1.02
SLIRP-204ENST00000555890 CACNA1BQ00975 2339 aa8.71□□□□□ -1.02
SLIRP-204ENST00000555890 RTL1A6NKG5 1358 aa8.71□□□□□ -1.02
SLIRP-204ENST00000555890 BRCA1P38398 1863 aaKnown RBP8.7□□□□□ -1.02
SLIRP-204ENST00000555890 GNAI1P63096 354 aa8.7□□□□□ -1.02
SLIRP-204ENST00000555890 PDE3AQ14432 1141 aa8.7□□□□□ -1.02
SLIRP-204ENST00000555890 DIXDC1Q155Q3 683 aa8.7□□□□□ -1.02
SLIRP-204ENST00000555890 DOK7Q18PE1 504 aa8.7□□□□□ -1.02
SLIRP-204ENST00000555890 MYSM1Q5VVJ2 828 aa8.7□□□□□ -1.02
SLIRP-204ENST00000555890 METTL3Q86U44 580 aaKnown RBP8.7□□□□□ -1.02
SLIRP-204ENST00000555890 PNMA8AQ86V59 439 aaPredicted RBP8.7□□□□□ -1.02
SLIRP-204ENST00000555890 SYTL4Q96C24 671 aaPredicted RBP8.7□□□□□ -1.02
SLIRP-204ENST00000555890 CRBNQ96SW2 442 aa8.7□□□□□ -1.02
SLIRP-204ENST00000555890 CCDC87Q9NVE4 849 aa8.7□□□□□ -1.02
SLIRP-204ENST00000555890 COG6Q9Y2V7 657 aa8.7□□□□□ -1.02
SLIRP-204ENST00000555890 FANCIQ9NVI1 1328 aa8.7□□□□□ -1.02
SLIRP-204ENST00000555890 CENPFP49454 3210 aa8.7□□□□□ -1.02
SLIRP-204ENST00000555890 SBF1O95248 1867 aa8.7□□□□□ -1.02
SLIRP-204ENST00000555890 BCAR3O75815 825 aa8.69□□□□□ -1.02
SLIRP-204ENST00000555890 HOXC9P31274 260 aa8.69□□□□□ -1.02
SLIRP-204ENST00000555890 CLK2P49760 499 aaKnown RBP8.69□□□□□ -1.02
SLIRP-204ENST00000555890 RARSP54136 660 aaKnown RBP8.69□□□□□ -1.02
SLIRP-204ENST00000555890 CST9Q5W186 159 aa8.69□□□□□ -1.02
SLIRP-204ENST00000555890 TYW1BQ6NUM6 668 aa8.69□□□□□ -1.02
SLIRP-204ENST00000555890 SAPCD2Q86UD0 394 aa8.69□□□□□ -1.02
SLIRP-204ENST00000555890 IFT57Q9NWB7 429 aa8.69□□□□□ -1.02
SLIRP-204ENST00000555890 RNF186Q9NXI6 227 aa8.69□□□□□ -1.02
SLIRP-204ENST00000555890 BDP1A6H8Y1 2624 aa8.69□□□□□ -1.02
SLIRP-204ENST00000555890 MUC6Q6W4X9 2439 aa8.68□□□□□ -1.02
SLIRP-204ENST00000555890 RIMBP2O15034 1052 aa8.68□□□□□ -1.02
SLIRP-204ENST00000555890 EXOSC9Q06265 439 aaKnown RBP8.68□□□□□ -1.02
SLIRP-204ENST00000555890 IP6K1Q92551 441 aa8.68□□□□□ -1.02
SLIRP-204ENST00000555890 TSR2Q969E8 191 aaKnown RBP8.68□□□□□ -1.02
SLIRP-204ENST00000555890 FBXW7Q969H0 707 aa8.68□□□□□ -1.02
SLIRP-204ENST00000555890 ZNF428Q96B54 188 aa8.68□□□□□ -1.02
SLIRP-204ENST00000555890 ZNF330Q9Y3S2 320 aaPredicted RBP8.68□□□□□ -1.02
SLIRP-204ENST00000555890 LAS1LQ9Y4W2 734 aaKnown RBP8.68□□□□□ -1.02
SLIRP-204ENST00000555890 PCDHGA10Q9Y5H3 936 aa8.68□□□□□ -1.02
SLIRP-204ENST00000555890 C4BP0C0L5 1744 aa8.68□□□□□ -1.02
SLIRP-204ENST00000555890 ARFGEF1Q9Y6D6 1849 aa8.68□□□□□ -1.02
SLIRP-204ENST00000555890 SETXQ7Z333 2677 aaKnown RBP8.67□□□□□ -1.02
SLIRP-204ENST00000555890 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.67□□□□□ -1.02
SLIRP-204ENST00000555890 HOXB3P14651 431 aaPredicted RBP8.67□□□□□ -1.02
SLIRP-204ENST00000555890 KDRP35968 1356 aa8.67□□□□□ -1.02
SLIRP-204ENST00000555890 RFC5P40937 340 aa8.67□□□□□ -1.02
SLIRP-204ENST00000555890 AAMPQ13685 434 aa8.67□□□□□ -1.02
SLIRP-204ENST00000555890 ERFEQ4G0M1 354 aa8.67□□□□□ -1.02
SLIRP-204ENST00000555890 TMEM259Q4ZIN3 620 aa8.67□□□□□ -1.02
SLIRP-204ENST00000555890 TJAP1Q5JTD0 557 aa8.67□□□□□ -1.02
SLIRP-204ENST00000555890 AEBP1Q8IUX7 1158 aa8.67□□□□□ -1.02
SLIRP-204ENST00000555890 GAS2L2Q8NHY3 880 aa8.67□□□□□ -1.02
SLIRP-204ENST00000555890 EYA1Q99502 592 aa8.67□□□□□ -1.02
SLIRP-204ENST00000555890 FAM208AQ9UK61 1670 aaKnown RBP8.67□□□□□ -1.02
SLIRP-204ENST00000555890 ANKRD11Q6UB99 2663 aaPredicted RBP8.66□□□□□ -1.02
SLIRP-204ENST00000555890 IPO8O15397 1037 aaKnown RBP8.66□□□□□ -1.02
SLIRP-204ENST00000555890 HTATSF1O43719 755 aaKnown RBP8.66□□□□□ -1.02
SLIRP-204ENST00000555890 FMR1Q06787 632 aaKnown RBP eCLIP8.66□□□□□ -1.02
SLIRP-204ENST00000555890 COL9A2Q14055 689 aaPredicted RBP8.66□□□□□ -1.02
SLIRP-204ENST00000555890 TSR1Q2NL82 804 aaKnown RBP8.66□□□□□ -1.02
SLIRP-204ENST00000555890 ALDH1L2Q3SY69 923 aa8.66□□□□□ -1.02
SLIRP-204ENST00000555890 C20orf194Q5TEA3 1177 aa8.66□□□□□ -1.02
SLIRP-204ENST00000555890 ZKSCAN2Q63HK3 967 aa8.66□□□□□ -1.02
SLIRP-204ENST00000555890 ZCRB1Q8TBF4 217 aaKnown RBP8.66□□□□□ -1.02
SLIRP-204ENST00000555890 PXYLP1Q8TE99 480 aa8.66□□□□□ -1.02
SLIRP-204ENST00000555890 RTF1Q92541 710 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms