RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 LRRC7Q96NW7 1537 aa12.04□□□□□ -0.48
EFCAB11-208ENST00000555872 AP1ARQ63HQ0 302 aa12.04□□□□□ -0.48
EFCAB11-208ENST00000555872 ARL10Q8N8L6 244 aa12.04□□□□□ -0.48
EFCAB11-208ENST00000555872 PLEKHF1Q96S99 279 aa12.04□□□□□ -0.48
EFCAB11-208ENST00000555872 GPBP1L1Q9HC44 474 aaPredicted RBP12.04□□□□□ -0.48
EFCAB11-208ENST00000555872 ANKRD26Q9UPS8 1709 aa12.03□□□□□ -0.48
EFCAB11-208ENST00000555872 ELL2O00472 640 aaPredicted RBP12.03□□□□□ -0.48
EFCAB11-208ENST00000555872 NEFHP12036 1026 aa12.03□□□□□ -0.48
EFCAB11-208ENST00000555872 MUM1L1Q5H9M0 696 aa12.03□□□□□ -0.48
EFCAB11-208ENST00000555872 ANKLE2Q86XL3 938 aa12.03□□□□□ -0.48
EFCAB11-208ENST00000555872 CACTINQ8WUQ7 758 aaKnown RBP12.03□□□□□ -0.48
EFCAB11-208ENST00000555872 ERO1AQ96HE7 468 aa12.03□□□□□ -0.48
EFCAB11-208ENST00000555872 TRIM5Q9C035 493 aa12.03□□□□□ -0.48
EFCAB11-208ENST00000555872 USP27XA6NNY8 438 aa12.03□□□□□ -0.48
EFCAB11-208ENST00000555872 POLR3GO15318 223 aaPredicted RBP12.03□□□□□ -0.48
EFCAB11-208ENST00000555872 C16orf87Q6PH81 154 aa12.03□□□□□ -0.48
EFCAB11-208ENST00000555872 MAMSTRQ6ZN01 415 aa12.03□□□□□ -0.48
EFCAB11-208ENST00000555872 FAM200AQ8TCP9 573 aa12.03□□□□□ -0.48
EFCAB11-208ENST00000555872 LZTS2Q9BRK4 669 aa12.03□□□□□ -0.48
EFCAB11-208ENST00000555872 YIPF2Q9BWQ6 316 aa12.03□□□□□ -0.48
EFCAB11-208ENST00000555872 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.03□□□□□ -0.48
EFCAB11-208ENST00000555872 PTPRUQ92729 1446 aa12.03□□□□□ -0.48
EFCAB11-208ENST00000555872 RPAP1Q9BWH6 1393 aaPredicted RBP12.03□□□□□ -0.48
EFCAB11-208ENST00000555872 PEX14O75381 377 aa12.02□□□□□ -0.48
EFCAB11-208ENST00000555872 NAT2P11245 290 aa12.02□□□□□ -0.48
EFCAB11-208ENST00000555872 HSPA1LP34931 641 aa12.02□□□□□ -0.48
EFCAB11-208ENST00000555872 RASA3Q14644 834 aa12.02□□□□□ -0.48
EFCAB11-208ENST00000555872 SPOCK2Q92563 424 aa12.02□□□□□ -0.48
EFCAB11-208ENST00000555872 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.02□□□□□ -0.48
EFCAB11-208ENST00000555872 PTPN14Q15678 1187 aa12.02□□□□□ -0.49
EFCAB11-208ENST00000555872 SLFNL1Q499Z3 407 aa12.02□□□□□ -0.49
EFCAB11-208ENST00000555872 SUGP1Q8IWZ8 645 aaKnown RBP12.02□□□□□ -0.49
EFCAB11-208ENST00000555872 BLOC1S6Q9UL45 172 aa12.02□□□□□ -0.49
EFCAB11-208ENST00000555872 CHMP3Q9Y3E7 222 aa12.02□□□□□ -0.49
EFCAB11-208ENST00000555872 FHOD1Q9Y613 1164 aa12.02□□□□□ -0.49
EFCAB11-208ENST00000555872 TOPAZ1Q8N9V7 1692 aa12.02□□□□□ -0.49
EFCAB11-208ENST00000555872 ATP7BP35670 1465 aa12.02□□□□□ -0.49
EFCAB11-208ENST00000555872 CSB-PGBD3P0DP91 1061 aa12.02□□□□□ -0.49
EFCAB11-208ENST00000555872 MRPL50Q8N5N7 158 aaKnown RBP12.02□□□□□ -0.49
EFCAB11-208ENST00000555872 CCDC26Q8TAB7 109 aa12.02□□□□□ -0.49
EFCAB11-208ENST00000555872 FAM163AQ96GL9 167 aaPredicted RBP12.02□□□□□ -0.49
EFCAB11-208ENST00000555872 NSD2O96028 1365 aa12.01□□□□□ -0.49
EFCAB11-208ENST00000555872 MINK1Q8N4C8 1332 aaPredicted RBP12.01□□□□□ -0.49
EFCAB11-208ENST00000555872 NEBLO76041 1014 aa12.01□□□□□ -0.49
EFCAB11-208ENST00000555872 ZSCAN22P10073 491 aaPredicted RBP12.01□□□□□ -0.49
EFCAB11-208ENST00000555872 TRAF1Q13077 416 aa12.01□□□□□ -0.49
EFCAB11-208ENST00000555872 TEX35Q5T0J7 233 aa12.01□□□□□ -0.49
EFCAB11-208ENST00000555872 WWC2Q6AWC2 1192 aa12.01□□□□□ -0.49
EFCAB11-208ENST00000555872 CDC37L1Q7L3B6 337 aa12.01□□□□□ -0.49
EFCAB11-208ENST00000555872 RGS17Q9UGC6 210 aaPredicted RBP12.01□□□□□ -0.49
EFCAB11-208ENST00000555872 HTATSF1O43719 755 aaKnown RBP12.01□□□□□ -0.49
EFCAB11-208ENST00000555872 SLU7O95391 586 aaKnown RBP12.01□□□□□ -0.49
EFCAB11-208ENST00000555872 CAMK4Q16566 473 aa12.01□□□□□ -0.49
EFCAB11-208ENST00000555872 ERCC6LQ2NKX8 1250 aa12.01□□□□□ -0.49
EFCAB11-208ENST00000555872 TMX4Q9H1E5 349 aaPredicted RBP12.01□□□□□ -0.49
EFCAB11-208ENST00000555872 SYNPO2Q9UMS6 1093 aa12.01□□□□□ -0.49
EFCAB11-208ENST00000555872 AKAP12Q02952 1782 aa12.01□□□□□ -0.49
EFCAB11-208ENST00000555872 ROBO2Q9HCK4 1378 aa12□□□□□ -0.49
EFCAB11-208ENST00000555872 ITSN1Q15811 1721 aa12□□□□□ -0.49
EFCAB11-208ENST00000555872 PLA2G4AP47712 749 aa12□□□□□ -0.49
EFCAB11-208ENST00000555872 TXLNBQ8N3L3 684 aa12□□□□□ -0.49
EFCAB11-208ENST00000555872 ARHGAP45Q92619 1136 aa12□□□□□ -0.49
EFCAB11-208ENST00000555872 CDK19Q9BWU1 502 aa12□□□□□ -0.49
EFCAB11-208ENST00000555872 TRMT1Q9NXH9 659 aaKnown RBP12□□□□□ -0.49
EFCAB11-208ENST00000555872 PNMA6AP0CW24 399 aaPredicted RBP12□□□□□ -0.49
EFCAB11-208ENST00000555872 ZNF75DP51815 510 aa12□□□□□ -0.49
EFCAB11-208ENST00000555872 TBC1D8BQ0IIM8 1120 aa12□□□□□ -0.49
EFCAB11-208ENST00000555872 CCDC144BQ3MJ40 725 aa12□□□□□ -0.49
EFCAB11-208ENST00000555872 KCNV1Q6PIU1 500 aa12□□□□□ -0.49
EFCAB11-208ENST00000555872 WAPLQ7Z5K2 1190 aa12□□□□□ -0.49
EFCAB11-208ENST00000555872 TTC30AQ86WT1 665 aa12□□□□□ -0.49
EFCAB11-208ENST00000555872 MYLK4Q86YV6 388 aaPredicted RBP12□□□□□ -0.49
EFCAB11-208ENST00000555872 CCDC144CPQ8IYA2 1237 aa12□□□□□ -0.49
EFCAB11-208ENST00000555872 TSPYL6Q8N831 410 aa12□□□□□ -0.49
EFCAB11-208ENST00000555872 ANO2Q9NQ90 1003 aa12□□□□□ -0.49
EFCAB11-208ENST00000555872 CLIP2Q9UDT6 1046 aa12□□□□□ -0.49
EFCAB11-208ENST00000555872 LRRFIP2Q9Y608 721 aaKnown RBP12□□□□□ -0.49
EFCAB11-208ENST00000555872 KIF20BQ96Q89 1820 aa12□□□□□ -0.49
EFCAB11-208ENST00000555872 WASLO00401 505 aaPredicted RBP11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 VAMP4O75379 141 aa11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 FCHSD2O94868 740 aa11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 SETSIPP0DME0 302 aa11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 CLCN6P51797 869 aa11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 ST5P78524 1137 aa11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 SAFB2Q14151 953 aaKnown RBP eCLIP11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 CCDC191Q8NCU4 936 aa11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 CABP2Q9NPB3 220 aa11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 IQSEC3Q9UPP2 1182 aaPredicted RBP11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 CTDP1Q9Y5B0 961 aaPredicted RBP11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 RTL1A6NKG5 1358 aa11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 CD163L1Q9NR16 1453 aa11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 MON2Q7Z3U7 1717 aa11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 ABCC4O15439 1325 aa11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 PTPRCP08575 1304 aa11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 STX6O43752 255 aa11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 H2AFXP16104 143 aaPredicted RBP11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 DNM1Q05193 864 aaKnown RBP11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 TYRO3Q06418 890 aa11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 ARID5BQ14865 1188 aa11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 CEP89Q96ST8 783 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms