RNA–Protein interactions for RNA: ENST00000555185.5

PRKCH-213, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-213ENST00000555185 GPSM2P81274 684 aa11.61□□□□□ -0.55
PRKCH-213ENST00000555185 TTLL12Q14166 644 aaPredicted RBP11.61□□□□□ -0.55
PRKCH-213ENST00000555185 PARP10Q53GL7 1025 aa11.61□□□□□ -0.55
PRKCH-213ENST00000555185 A0A0C4DFX4 3053 aa11.61□□□□□ -0.55
PRKCH-213ENST00000555185 DLG5Q8TDM6 1919 aa11.6□□□□□ -0.55
PRKCH-213ENST00000555185 COL6A3P12111 3177 aa11.6□□□□□ -0.55
PRKCH-213ENST00000555185 PRKG1Q13976 671 aa11.6□□□□□ -0.55
PRKCH-213ENST00000555185 OTOP1Q7RTM1 612 aa11.6□□□□□ -0.55
PRKCH-213ENST00000555185 CELF1Q92879 486 aaKnown RBP11.6□□□□□ -0.55
PRKCH-213ENST00000555185 RANBP2P49792 3224 aaKnown RBP11.6□□□□□ -0.55
PRKCH-213ENST00000555185 CUL9Q8IWT3 2517 aa11.6□□□□□ -0.55
PRKCH-213ENST00000555185 PER1O15534 1290 aaPredicted RBP11.59□□□□□ -0.55
PRKCH-213ENST00000555185 EIF4A1P60842 406 aaKnown RBP11.59□□□□□ -0.55
PRKCH-213ENST00000555185 FKBP1BP68106 108 aa11.59□□□□□ -0.55
PRKCH-213ENST00000555185 PROSER3Q2NL68 480 aa11.59□□□□□ -0.55
PRKCH-213ENST00000555185 H0YGN5 161 aa11.58□□□□□ -0.56
PRKCH-213ENST00000555185 VIL1P09327 827 aaKnown RBP11.58□□□□□ -0.56
PRKCH-213ENST00000555185 U2AF1L5P0DN76 240 aaPredicted RBP11.58□□□□□ -0.56
PRKCH-213ENST00000555185 U2AF1Q01081 240 aaKnown RBP eCLIP11.58□□□□□ -0.56
PRKCH-213ENST00000555185 NOM1Q5C9Z4 860 aaKnown RBP11.58□□□□□ -0.56
PRKCH-213ENST00000555185 LRP10Q7Z4F1 713 aa11.58□□□□□ -0.56
PRKCH-213ENST00000555185 NLRP10Q86W26 655 aa11.58□□□□□ -0.56
PRKCH-213ENST00000555185 SLC17A8Q8NDX2 589 aa11.58□□□□□ -0.56
PRKCH-213ENST00000555185 TRMT112Q9UI30 125 aaKnown RBP11.58□□□□□ -0.56
PRKCH-213ENST00000555185 FZD1Q9UP38 647 aa11.58□□□□□ -0.56
PRKCH-213ENST00000555185 MYCP01106 439 aaPredicted RBP11.57□□□□□ -0.56
PRKCH-213ENST00000555185 ZNF280AP59817 542 aaPredicted RBP11.57□□□□□ -0.56
PRKCH-213ENST00000555185 CAP1Q01518 475 aa11.57□□□□□ -0.56
PRKCH-213ENST00000555185 PTPN12Q05209 780 aaKnown RBP11.57□□□□□ -0.56
PRKCH-213ENST00000555185 INTS3Q68E01 1043 aaKnown RBP11.57□□□□□ -0.56
PRKCH-213ENST00000555185 TBC1D16Q8TBP0 767 aa11.57□□□□□ -0.56
PRKCH-213ENST00000555185 PSME4Q14997 1843 aa11.56□□□□□ -0.56
PRKCH-213ENST00000555185 EIF2S2P20042 333 aaKnown RBP11.56□□□□□ -0.56
PRKCH-213ENST00000555185 SREBF2Q12772 1141 aa11.56□□□□□ -0.56
PRKCH-213ENST00000555185 AIMP1Q12904 312 aaKnown RBP11.56□□□□□ -0.56
PRKCH-213ENST00000555185 PDIA6Q15084 440 aa11.56□□□□□ -0.56
PRKCH-213ENST00000555185 NBPF9Q3BBW0 867 aa11.56□□□□□ -0.56
PRKCH-213ENST00000555185 CHRDL2Q6WN34 429 aa11.56□□□□□ -0.56
PRKCH-213ENST00000555185 CD99L2Q8TCZ2 262 aa11.56□□□□□ -0.56
PRKCH-213ENST00000555185 NECTIN2Q92692 538 aa11.56□□□□□ -0.56
PRKCH-213ENST00000555185 OTUD5Q96G74 571 aa11.56□□□□□ -0.56
PRKCH-213ENST00000555185 MYOZ2Q9NPC6 264 aa11.56□□□□□ -0.56
PRKCH-213ENST00000555185 PTPN22Q9Y2R2 807 aa11.56□□□□□ -0.56
PRKCH-213ENST00000555185 SH3TC1Q8TE82 1336 aa11.56□□□□□ -0.56
PRKCH-213ENST00000555185 RTL5Q5HYW3 569 aaPredicted RBP11.55□□□□□ -0.56
PRKCH-213ENST00000555185 RSBN1LQ6PCB5 846 aaPredicted RBP11.55□□□□□ -0.56
PRKCH-213ENST00000555185 EYA3Q99504 573 aa11.55□□□□□ -0.56
PRKCH-213ENST00000555185 MXD3Q9BW11 206 aa11.55□□□□□ -0.56
PRKCH-213ENST00000555185 CFHR5Q9BXR6 569 aa11.55□□□□□ -0.56
PRKCH-213ENST00000555185 G3V3G9 751 aa11.54□□□□□ -0.56
PRKCH-213ENST00000555185 HTATSF1O43719 755 aaKnown RBP11.54□□□□□ -0.56
PRKCH-213ENST00000555185 UFL1O94874 794 aa11.54□□□□□ -0.56
PRKCH-213ENST00000555185 DCAF8Q5TAQ9 597 aa11.54□□□□□ -0.56
PRKCH-213ENST00000555185 SPRYD7Q5W111 196 aa11.54□□□□□ -0.56
PRKCH-213ENST00000555185 TMC4Q7Z404 712 aa11.54□□□□□ -0.56
PRKCH-213ENST00000555185 ARMC5Q96C12 935 aa11.54□□□□□ -0.56
PRKCH-213ENST00000555185 ZC3H12CQ9C0D7 883 aaKnown RBP11.54□□□□□ -0.56
PRKCH-213ENST00000555185 RBM27Q9P2N5 1060 aaKnown RBP11.54□□□□□ -0.56
PRKCH-213ENST00000555185 PITPNM2Q9BZ72 1349 aa11.54□□□□□ -0.56
PRKCH-213ENST00000555185 ZNF609O15014 1411 aa11.53□□□□□ -0.56
PRKCH-213ENST00000555185 IGF2BP3O00425 579 aaKnown RBP eCLIP11.53□□□□□ -0.56
PRKCH-213ENST00000555185 USP17L8P0C7I0 530 aa11.53□□□□□ -0.56
PRKCH-213ENST00000555185 COPS6Q7L5N1 327 aa11.53□□□□□ -0.56
PRKCH-213ENST00000555185 XAGE3Q8WTP9 111 aa11.53□□□□□ -0.56
PRKCH-213ENST00000555185 FAM89AQ96GI7 184 aa11.53□□□□□ -0.56
PRKCH-213ENST00000555185 GMLQ99445 158 aa11.53□□□□□ -0.56
PRKCH-213ENST00000555185 SASH1O94885 1247 aa11.52□□□□□ -0.57
PRKCH-213ENST00000555185 TCIRG1Q13488 830 aa11.52□□□□□ -0.57
PRKCH-213ENST00000555185 IFNL1Q8IU54 200 aa11.52□□□□□ -0.57
PRKCH-213ENST00000555185 AGBL3Q8NEM8 1001 aa11.52□□□□□ -0.57
PRKCH-213ENST00000555185 PNISRQ8TF01 805 aaKnown RBP11.52□□□□□ -0.57
PRKCH-213ENST00000555185 CFAP53Q96M91 514 aa11.52□□□□□ -0.57
PRKCH-213ENST00000555185 TMEM106CQ9BVX2 250 aa11.52□□□□□ -0.57
PRKCH-213ENST00000555185 ANGEL1Q9UNK9 670 aaKnown RBP11.52□□□□□ -0.57
PRKCH-213ENST00000555185 LAMA3Q16787 3333 aa11.52□□□□□ -0.57
PRKCH-213ENST00000555185 ERBB4Q15303 1308 aa11.52□□□□□ -0.57
PRKCH-213ENST00000555185 WTIPA6NIX2 430 aaPredicted RBP11.51□□□□□ -0.57
PRKCH-213ENST00000555185 CRHR2Q13324 411 aa11.51□□□□□ -0.57
PRKCH-213ENST00000555185 HSP90AB3PQ58FF7 597 aa11.51□□□□□ -0.57
PRKCH-213ENST00000555185 ZNF333Q96JL9 665 aa11.51□□□□□ -0.57
PRKCH-213ENST00000555185 CLMNQ96JQ2 1002 aa11.51□□□□□ -0.57
PRKCH-213ENST00000555185 EFCC1Q9HA90 598 aa11.51□□□□□ -0.57
PRKCH-213ENST00000555185 SEC31BQ9NQW1 1179 aa11.51□□□□□ -0.57
PRKCH-213ENST00000555185 ANKIB1Q9P2G1 1089 aa11.51□□□□□ -0.57
PRKCH-213ENST00000555185 TIMELESSQ9UNS1 1208 aa11.51□□□□□ -0.57
PRKCH-213ENST00000555185 NUDCQ9Y266 331 aa11.51□□□□□ -0.57
PRKCH-213ENST00000555185 ZSWIM8A7E2V4 1837 aa11.51□□□□□ -0.57
PRKCH-213ENST00000555185 ZNF646O15015 1829 aaPredicted RBP11.51□□□□□ -0.57
PRKCH-213ENST00000555185 ATP5J2-PTCD1G3V325 749 aa11.5□□□□□ -0.57
PRKCH-213ENST00000555185 ALDH1A1P00352 501 aa11.5□□□□□ -0.57
PRKCH-213ENST00000555185 NF2P35240 595 aa11.5□□□□□ -0.57
PRKCH-213ENST00000555185 SF3B3Q15393 1217 aaKnown RBP11.5□□□□□ -0.57
PRKCH-213ENST00000555185 SLC4A8Q2Y0W8 1093 aa11.5□□□□□ -0.57
PRKCH-213ENST00000555185 ARMC9Q7Z3E5 817 aa11.5□□□□□ -0.57
PRKCH-213ENST00000555185 ERO1AQ96HE7 468 aa11.5□□□□□ -0.57
PRKCH-213ENST00000555185 MANSC4A6NHS7 340 aaPredicted RBP11.49□□□□□ -0.57
PRKCH-213ENST00000555185 WNT10BO00744 389 aa11.49□□□□□ -0.57
PRKCH-213ENST00000555185 RPS8P62241 208 aaKnown RBP11.49□□□□□ -0.57
PRKCH-213ENST00000555185 LDLRAD1Q5T700 205 aa11.49□□□□□ -0.57
PRKCH-213ENST00000555185 FBXW7Q969H0 707 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms