RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 USP21Q9UK80 565 aa7.48□□□□□ -1.21
ATXN3-228ENST00000554592 HCN2Q9UL51 889 aa7.48□□□□□ -1.21
ATXN3-228ENST00000554592 PARP3Q9Y6F1 533 aa7.48□□□□□ -1.21
ATXN3-228ENST00000554592 AHDC1Q5TGY3 1603 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-228ENST00000554592 KDM5AP29375 1690 aaKnown RBP7.47□□□□□ -1.21
ATXN3-228ENST00000554592 ADGRB3O60242 1522 aa7.47□□□□□ -1.21
ATXN3-228ENST00000554592 CFAP65Q6ZU64 1925 aaKnown RBP7.47□□□□□ -1.21
ATXN3-228ENST00000554592 DAPK1P53355 1430 aa7.47□□□□□ -1.21
ATXN3-228ENST00000554592 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-228ENST00000554592 C21orf2O43822 256 aa7.47□□□□□ -1.21
ATXN3-228ENST00000554592 NOS2P35228 1153 aa7.47□□□□□ -1.21
ATXN3-228ENST00000554592 TXLNAP40222 546 aa7.47□□□□□ -1.21
ATXN3-228ENST00000554592 TBCELQ5QJ74 424 aa7.47□□□□□ -1.21
ATXN3-228ENST00000554592 FOXR1Q6PIV2 292 aa7.47□□□□□ -1.21
ATXN3-228ENST00000554592 TSEN2Q8NCE0 465 aaKnown RBP7.47□□□□□ -1.21
ATXN3-228ENST00000554592 TSPAN10Q9H1Z9 355 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-228ENST00000554592 RPRD2Q5VT52 1461 aaKnown RBP7.47□□□□□ -1.21
ATXN3-228ENST00000554592 CEP152O94986 1710 aa7.47□□□□□ -1.21
ATXN3-228ENST00000554592 DCCP43146 1447 aa7.46□□□□□ -1.21
ATXN3-228ENST00000554592 VPS8Q8N3P4 1428 aa7.46□□□□□ -1.21
ATXN3-228ENST00000554592 FAM196BA6NMK8 535 aa7.46□□□□□ -1.22
ATXN3-228ENST00000554592 EML1O00423 815 aa7.46□□□□□ -1.22
ATXN3-228ENST00000554592 BNIP3LO60238 219 aa7.46□□□□□ -1.22
ATXN3-228ENST00000554592 ARHGEF15O94989 841 aa7.46□□□□□ -1.22
ATXN3-228ENST00000554592 SH3PXD2AQ5TCZ1 1133 aa7.46□□□□□ -1.22
ATXN3-228ENST00000554592 LYPD4Q6UWN0 246 aa7.46□□□□□ -1.22
ATXN3-228ENST00000554592 DDX17Q92841 729 aaKnown RBP7.46□□□□□ -1.22
ATXN3-228ENST00000554592 L3MBTL2Q969R5 705 aa7.46□□□□□ -1.22
ATXN3-228ENST00000554592 PBXIP1Q96AQ6 731 aa7.46□□□□□ -1.22
ATXN3-228ENST00000554592 AIDAQ96BJ3 306 aa7.46□□□□□ -1.22
ATXN3-228ENST00000554592 ZIC5Q96T25 663 aa7.46□□□□□ -1.22
ATXN3-228ENST00000554592 VRTNQ9H8Y1 702 aa7.46□□□□□ -1.22
ATXN3-228ENST00000554592 PNPLA6Q8IY17 1366 aa7.46□□□□□ -1.22
ATXN3-228ENST00000554592 CSB-PGBD3P0DP91 1061 aa7.45□□□□□ -1.22
ATXN3-228ENST00000554592 NLRP8Q86W28 1048 aa7.45□□□□□ -1.22
ATXN3-228ENST00000554592 PGBD3Q8N328 593 aa7.45□□□□□ -1.22
ATXN3-228ENST00000554592 RETREG2Q8NC44 543 aa7.45□□□□□ -1.22
ATXN3-228ENST00000554592 KLRG1Q96E93 195 aa7.45□□□□□ -1.22
ATXN3-228ENST00000554592 TRERF1Q96PN7 1200 aa7.45□□□□□ -1.22
ATXN3-228ENST00000554592 PTPRUQ92729 1446 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 A0A1W2PNR3 127 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 USP17L15C9J2P7 530 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 USP17L10C9JJH3 530 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 USP17L13C9JLJ4 530 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 USP17L12C9JPN9 530 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 USP17L11C9JVI0 530 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 USP17L21D6R901 530 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 USP17L18D6R9N7 530 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 USP17L22D6RA61 530 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 USP17L17D6RBQ6 530 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 USP17L19D6RCP7 530 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 USP17L20D6RJB6 530 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 PDIA4P13667 645 aaKnown RBP7.44□□□□□ -1.22
ATXN3-228ENST00000554592 HIRAP54198 1017 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-228ENST00000554592 SEC13P55735 322 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 USP17L24Q0WX57 530 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 NBPF1Q3BBV0 1214 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 EFHC2Q5JST6 749 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 LARP1Q6PKG0 1096 aaKnown RBP7.44□□□□□ -1.22
ATXN3-228ENST00000554592 ZCCHC2Q9C0B9 1178 aaKnown RBP7.44□□□□□ -1.22
ATXN3-228ENST00000554592 SHPRHQ149N8 1683 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 MST1RQ04912 1400 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 ANKRD50Q9ULJ7 1429 aa7.44□□□□□ -1.22
ATXN3-228ENST00000554592 DIP2AQ14689 1571 aa7.43□□□□□ -1.22
ATXN3-228ENST00000554592 C2CD2LO14523 706 aa7.43□□□□□ -1.22
ATXN3-228ENST00000554592 MX2P20592 715 aa7.43□□□□□ -1.22
ATXN3-228ENST00000554592 DPYDQ12882 1025 aa7.43□□□□□ -1.22
ATXN3-228ENST00000554592 ANKMY2Q8IV38 441 aa7.43□□□□□ -1.22
ATXN3-228ENST00000554592 ABHD17AQ96GS6 310 aa7.43□□□□□ -1.22
ATXN3-228ENST00000554592 ATXN7L1Q9ULK2 861 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-228ENST00000554592 ACIN1Q9UKV3 1341 aaKnown RBP7.43□□□□□ -1.22
ATXN3-228ENST00000554592 ASXL1Q8IXJ9 1541 aa7.42□□□□□ -1.22
ATXN3-228ENST00000554592 SRCAPQ6ZRS2 3230 aa7.42□□□□□ -1.22
ATXN3-228ENST00000554592 LOC105371045A0A1W2PR82 267 aa7.42□□□□□ -1.22
ATXN3-228ENST00000554592 SERTM1A2A2V5 107 aa7.42□□□□□ -1.22
ATXN3-228ENST00000554592 CELA2BP08218 269 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-228ENST00000554592 PSMA6P60900 246 aaKnown RBP7.42□□□□□ -1.22
ATXN3-228ENST00000554592 FAM50AQ14320 339 aaKnown RBP7.42□□□□□ -1.22
ATXN3-228ENST00000554592 CDCA8Q53HL2 280 aa7.42□□□□□ -1.22
ATXN3-228ENST00000554592 ACDQ96AP0 544 aa7.42□□□□□ -1.22
ATXN3-228ENST00000554592 ORAI2Q96SN7 254 aa7.42□□□□□ -1.22
ATXN3-228ENST00000554592 PCDHGC4Q9Y5F7 938 aa7.42□□□□□ -1.22
ATXN3-228ENST00000554592 CHD2O14647 1828 aaKnown RBP7.42□□□□□ -1.22
ATXN3-228ENST00000554592 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-228ENST00000554592 TATP17735 454 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-228ENST00000554592 CTBSQ01459 385 aa7.41□□□□□ -1.22
ATXN3-228ENST00000554592 TNP2Q05952 138 aa7.41□□□□□ -1.22
ATXN3-228ENST00000554592 SF3B2Q13435 895 aaKnown RBP7.41□□□□□ -1.22
ATXN3-228ENST00000554592 ZNF326Q5BKZ1 582 aaKnown RBP7.41□□□□□ -1.22
ATXN3-228ENST00000554592 STAG2Q8N3U4 1231 aa7.41□□□□□ -1.22
ATXN3-228ENST00000554592 ADAMTS8Q9UP79 889 aa7.41□□□□□ -1.22
ATXN3-228ENST00000554592 METP08581 1390 aa7.41□□□□□ -1.22
ATXN3-228ENST00000554592 ATRNO75882 1429 aa7.41□□□□□ -1.22
ATXN3-228ENST00000554592 PTCH1Q13635 1447 aa7.41□□□□□ -1.22
ATXN3-228ENST00000554592 ATXN7O15265 892 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-228ENST00000554592 GSK3AP49840 483 aa7.4□□□□□ -1.22
ATXN3-228ENST00000554592 ARSJQ5FYB0 599 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-228ENST00000554592 SAMD5Q5TGI4 173 aa7.4□□□□□ -1.22
ATXN3-228ENST00000554592 C1orf53Q5VUE5 145 aa7.4□□□□□ -1.22
ATXN3-228ENST00000554592 FIGNL1Q6PIW4 674 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms