RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 PUS3Q9BZE2 481 aaKnown RBP12.83□□□□□ -0.36
TMEM55B-205ENST00000554028 MTFR1LQ9H019 292 aa12.83□□□□□ -0.36
TMEM55B-205ENST00000554028 TMX4Q9H1E5 349 aaPredicted RBP12.83□□□□□ -0.36
TMEM55B-205ENST00000554028 BSDC1Q9NW68 430 aaPredicted RBP12.83□□□□□ -0.36
TMEM55B-205ENST00000554028 RIPOR2Q9Y4F9 1068 aa12.83□□□□□ -0.36
TMEM55B-205ENST00000554028 ERC2O15083 957 aa12.82□□□□□ -0.36
TMEM55B-205ENST00000554028 GRAPQ13588 217 aa12.82□□□□□ -0.36
TMEM55B-205ENST00000554028 CRY2Q49AN0 593 aa12.82□□□□□ -0.36
TMEM55B-205ENST00000554028 TNNI3KQ59H18 835 aa12.82□□□□□ -0.36
TMEM55B-205ENST00000554028 GORABQ5T7V8 394 aa12.82□□□□□ -0.36
TMEM55B-205ENST00000554028 C3orf67Q6ZVT6 689 aa12.82□□□□□ -0.36
TMEM55B-205ENST00000554028 SKAP1Q86WV1 359 aa12.82□□□□□ -0.36
TMEM55B-205ENST00000554028 PLEKHM2Q8IWE5 1019 aa12.82□□□□□ -0.36
TMEM55B-205ENST00000554028 GRAPLQ8TC17 118 aaPredicted RBP12.82□□□□□ -0.36
TMEM55B-205ENST00000554028 NEUROD6Q96NK8 337 aa12.82□□□□□ -0.36
TMEM55B-205ENST00000554028 FPGT-TNNI3KV9GXZ4 949 aa12.82□□□□□ -0.36
TMEM55B-205ENST00000554028 COL24A1Q17RW2 1714 aa12.82□□□□□ -0.36
TMEM55B-205ENST00000554028 KLRG2A4D1S0 409 aaPredicted RBP12.81□□□□□ -0.36
TMEM55B-205ENST00000554028 H0YIN7 160 aa12.81□□□□□ -0.36
TMEM55B-205ENST00000554028 BBOX1O75936 387 aa12.81□□□□□ -0.36
TMEM55B-205ENST00000554028 PDE8BO95263 885 aa12.81□□□□□ -0.36
TMEM55B-205ENST00000554028 NPR1P16066 1061 aa12.81□□□□□ -0.36
TMEM55B-205ENST00000554028 ALDH1B1P30837 517 aa12.81□□□□□ -0.36
TMEM55B-205ENST00000554028 PDE1AP54750 535 aa12.81□□□□□ -0.36
TMEM55B-205ENST00000554028 TMC4Q7Z404 712 aa12.81□□□□□ -0.36
TMEM55B-205ENST00000554028 CRAMP1Q96RY5 1269 aa12.81□□□□□ -0.36
TMEM55B-205ENST00000554028 ANKRD2Q9GZV1 360 aa12.81□□□□□ -0.36
TMEM55B-205ENST00000554028 OSBPL3Q9H4L5 887 aa12.81□□□□□ -0.36
TMEM55B-205ENST00000554028 STAP2Q9UGK3 403 aa12.81□□□□□ -0.36
TMEM55B-205ENST00000554028 QSER1Q2KHR3 1735 aa12.8□□□□□ -0.36
TMEM55B-205ENST00000554028 ZBTB7AO95365 584 aa12.8□□□□□ -0.36
TMEM55B-205ENST00000554028 HOXA10P31260 410 aaPredicted RBP12.8□□□□□ -0.36
TMEM55B-205ENST00000554028 ATP2B3Q16720 1220 aa12.8□□□□□ -0.36
TMEM55B-205ENST00000554028 CELF1Q92879 486 aaKnown RBP12.8□□□□□ -0.36
TMEM55B-205ENST00000554028 EAF2Q96CJ1 260 aaPredicted RBP12.8□□□□□ -0.36
TMEM55B-205ENST00000554028 PDGFDQ9GZP0 370 aaPredicted RBP12.8□□□□□ -0.36
TMEM55B-205ENST00000554028 CCDC8Q9H0W5 538 aaPredicted RBP12.8□□□□□ -0.36
TMEM55B-205ENST00000554028 ECHDC1Q9NTX5 307 aa12.8□□□□□ -0.36
TMEM55B-205ENST00000554028 AOX1Q06278 1338 aa12.8□□□□□ -0.36
TMEM55B-205ENST00000554028 TTC41PQ6P2S7 1318 aa12.8□□□□□ -0.36
TMEM55B-205ENST00000554028 A0A1B0GUL7 405 aa12.79□□□□□ -0.36
TMEM55B-205ENST00000554028 PITPNM1O00562 1244 aa12.79□□□□□ -0.36
TMEM55B-205ENST00000554028 GLRX3O76003 335 aaKnown RBP12.79□□□□□ -0.36
TMEM55B-205ENST00000554028 IFIT1P09914 478 aaKnown RBP12.79□□□□□ -0.36
TMEM55B-205ENST00000554028 SLC5A1P13866 664 aa12.79□□□□□ -0.36
TMEM55B-205ENST00000554028 KCNJ4P48050 445 aa12.79□□□□□ -0.36
TMEM55B-205ENST00000554028 PUM3Q15397 648 aaKnown RBP12.79□□□□□ -0.36
TMEM55B-205ENST00000554028 BMP2KLQ5H9B9 411 aa12.79□□□□□ -0.36
TMEM55B-205ENST00000554028 CCDC158Q5M9N0 1113 aa12.79□□□□□ -0.36
TMEM55B-205ENST00000554028 C2CD5Q86YS7 1000 aa12.79□□□□□ -0.36
TMEM55B-205ENST00000554028 MASTLQ96GX5 879 aa12.79□□□□□ -0.36
TMEM55B-205ENST00000554028 ATF5Q9Y2D1 282 aaPredicted RBP12.79□□□□□ -0.36
TMEM55B-205ENST00000554028 PSDA5PKW4 1024 aaPredicted RBP12.78□□□□□ -0.36
TMEM55B-205ENST00000554028 SRGNP10124 158 aa12.78□□□□□ -0.36
TMEM55B-205ENST00000554028 TIMM10P62072 90 aa12.78□□□□□ -0.36
TMEM55B-205ENST00000554028 CHRNDQ07001 517 aa12.78□□□□□ -0.36
TMEM55B-205ENST00000554028 TTC22Q5TAA0 569 aa12.78□□□□□ -0.36
TMEM55B-205ENST00000554028 STYK1Q6J9G0 422 aa12.78□□□□□ -0.36
TMEM55B-205ENST00000554028 OTUD7AQ8TE49 926 aaPredicted RBP12.78□□□□□ -0.36
TMEM55B-205ENST00000554028 LPIN2Q92539 896 aa12.78□□□□□ -0.36
TMEM55B-205ENST00000554028 ZNF622Q969S3 477 aaKnown RBP eCLIP12.78□□□□□ -0.36
TMEM55B-205ENST00000554028 MINPP1Q9UNW1 487 aa12.78□□□□□ -0.36
TMEM55B-205ENST00000554028 TUBGCP6Q96RT7 1819 aa12.78□□□□□ -0.36
TMEM55B-205ENST00000554028 DDX60Q8IY21 1712 aaKnown RBP12.77□□□□□ -0.36
TMEM55B-205ENST00000554028 LAMB2P55268 1798 aa12.77□□□□□ -0.36
TMEM55B-205ENST00000554028 EIF5BO60841 1220 aaKnown RBP12.77□□□□□ -0.37
TMEM55B-205ENST00000554028 FXR2P51116 673 aaKnown RBP eCLIP12.77□□□□□ -0.37
TMEM55B-205ENST00000554028 CASC1Q6TDU7 716 aa12.77□□□□□ -0.37
TMEM55B-205ENST00000554028 HELBQ8NG08 1087 aaPredicted RBP12.77□□□□□ -0.37
TMEM55B-205ENST00000554028 CNKSR1Q969H4 720 aa12.77□□□□□ -0.37
TMEM55B-205ENST00000554028 TRIM6-TRIM34B2RNG4 842 aa12.76□□□□□ -0.37
TMEM55B-205ENST00000554028 UBE4AQ14139 1066 aa12.76□□□□□ -0.37
TMEM55B-205ENST00000554028 TTC39AQ5SRH9 613 aa12.76□□□□□ -0.37
TMEM55B-205ENST00000554028 VGLL2Q8N8G2 317 aa12.76□□□□□ -0.37
TMEM55B-205ENST00000554028 XAGE2Q96GT9 111 aa12.76□□□□□ -0.37
TMEM55B-205ENST00000554028 DBNDD2Q9BQY9 259 aa12.76□□□□□ -0.37
TMEM55B-205ENST00000554028 ANKIB1Q9P2G1 1089 aa12.76□□□□□ -0.37
TMEM55B-205ENST00000554028 SALL3Q9BXA9 1300 aa12.76□□□□□ -0.37
TMEM55B-205ENST00000554028 MYH3P11055 1940 aa12.76□□□□□ -0.37
TMEM55B-205ENST00000554028 PPEF1O14829 653 aaPredicted RBP12.75□□□□□ -0.37
TMEM55B-205ENST00000554028 TAF5LO75529 589 aa12.75□□□□□ -0.37
TMEM55B-205ENST00000554028 ATP5JP18859 108 aa12.75□□□□□ -0.37
TMEM55B-205ENST00000554028 CAVIN4Q5BKX8 364 aa12.75□□□□□ -0.37
TMEM55B-205ENST00000554028 SP8Q8IXZ3 490 aa12.75□□□□□ -0.37
TMEM55B-205ENST00000554028 CNTROBQ8N137 903 aa12.75□□□□□ -0.37
TMEM55B-205ENST00000554028 RILPL2Q969X0 211 aa12.75□□□□□ -0.37
TMEM55B-205ENST00000554028 GNL3LQ9NVN8 582 aaKnown RBP12.75□□□□□ -0.37
TMEM55B-205ENST00000554028 DBNLQ9UJU6 430 aaKnown RBP12.75□□□□□ -0.37
TMEM55B-205ENST00000554028 LEMD3Q9Y2U8 911 aa12.75□□□□□ -0.37
TMEM55B-205ENST00000554028 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.75□□□□□ -0.37
TMEM55B-205ENST00000554028 XDHP47989 1333 aa12.74□□□□□ -0.37
TMEM55B-205ENST00000554028 UQCRFS1P1P0C7P4 283 aa12.74□□□□□ -0.37
TMEM55B-205ENST00000554028 FGFR2P21802 821 aa12.74□□□□□ -0.37
TMEM55B-205ENST00000554028 TGFB2P61812 414 aa12.74□□□□□ -0.37
TMEM55B-205ENST00000554028 TSHZ3Q63HK5 1081 aa12.74□□□□□ -0.37
TMEM55B-205ENST00000554028 VPS37DQ86XT2 251 aa12.74□□□□□ -0.37
TMEM55B-205ENST00000554028 SPON1Q9HCB6 807 aa12.74□□□□□ -0.37
TMEM55B-205ENST00000554028 TLR7Q9NYK1 1049 aaKnown RBP12.74□□□□□ -0.37
TMEM55B-205ENST00000554028 ATP6V0A2Q9Y487 856 aa12.74□□□□□ -0.37
TMEM55B-205ENST00000554028 ZNF609O15014 1411 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms