RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ARMC10Q8N2F6 343 aa5.72□□□□□ -1.49
SRP54-204ENST00000553923 GALNT11Q8NCW6 608 aa5.72□□□□□ -1.49
SRP54-204ENST00000553923 TRIM33Q9UPN9 1127 aa5.72□□□□□ -1.49
SRP54-204ENST00000553923 OAS3Q9Y6K5 1087 aaKnown RBP5.72□□□□□ -1.49
SRP54-204ENST00000553923 PAX4O43316 350 aa5.71□□□□□ -1.5
SRP54-204ENST00000553923 TGFB1P01137 390 aa5.71□□□□□ -1.5
SRP54-204ENST00000553923 PSAPP07602 524 aa5.71□□□□□ -1.5
SRP54-204ENST00000553923 ZDHHC13Q8IUH4 622 aa5.71□□□□□ -1.5
SRP54-204ENST00000553923 RGL4Q8IZJ4 473 aa5.71□□□□□ -1.5
SRP54-204ENST00000553923 CMTR1Q8N1G2 835 aaKnown RBP5.71□□□□□ -1.5
SRP54-204ENST00000553923 CLUAP1Q96AJ1 413 aa5.71□□□□□ -1.5
SRP54-204ENST00000553923 NSUN5Q96P11 429 aaKnown RBP5.71□□□□□ -1.5
SRP54-204ENST00000553923 WISP1O95388 367 aa5.7□□□□□ -1.5
SRP54-204ENST00000553923 TXKP42681 527 aa5.7□□□□□ -1.5
SRP54-204ENST00000553923 FAM26DQ5JW98 314 aa5.7□□□□□ -1.5
SRP54-204ENST00000553923 COX20Q5RI15 118 aa5.7□□□□□ -1.5
SRP54-204ENST00000553923 ADAMTSL4Q6UY14 1074 aa5.7□□□□□ -1.5
SRP54-204ENST00000553923 CACTIN-AS1Q8N1I8 211 aa5.7□□□□□ -1.5
SRP54-204ENST00000553923 VRTNQ9H8Y1 702 aa5.7□□□□□ -1.5
SRP54-204ENST00000553923 GSC2O15499 205 aa5.69□□□□□ -1.5
SRP54-204ENST00000553923 COBLO75128 1261 aa5.69□□□□□ -1.5
SRP54-204ENST00000553923 GHRHP01286 108 aa5.69□□□□□ -1.5
SRP54-204ENST00000553923 TAL1P17542 331 aaPredicted RBP5.69□□□□□ -1.5
SRP54-204ENST00000553923 SPINK2P20155 84 aa5.69□□□□□ -1.5
SRP54-204ENST00000553923 GP2P55259 537 aaKnown RBP5.69□□□□□ -1.5
SRP54-204ENST00000553923 TRIP4Q15650 581 aaPredicted RBP5.69□□□□□ -1.5
SRP54-204ENST00000553923 COL13A1Q5TAT6 717 aaPredicted RBP5.69□□□□□ -1.5
SRP54-204ENST00000553923 PROSER2Q86WR7 435 aaPredicted RBP5.69□□□□□ -1.5
SRP54-204ENST00000553923 ETFBKMTQ8IXQ9 262 aa5.69□□□□□ -1.5
SRP54-204ENST00000553923 DCAF11Q8TEB1 546 aa5.69□□□□□ -1.5
SRP54-204ENST00000553923 KCNK4Q9NYG8 393 aa5.69□□□□□ -1.5
SRP54-204ENST00000553923 PPME1Q9Y570 386 aa5.69□□□□□ -1.5
SRP54-204ENST00000553923 PRR19A6NJB7 356 aa5.68□□□□□ -1.5
SRP54-204ENST00000553923 GLB1P16278 677 aa5.68□□□□□ -1.5
SRP54-204ENST00000553923 IRAK1P51617 712 aa5.68□□□□□ -1.5
SRP54-204ENST00000553923 FKBP5Q13451 457 aaPredicted RBP5.68□□□□□ -1.5
SRP54-204ENST00000553923 MUC3BQ9H195 1237 aa5.68□□□□□ -1.5
SRP54-204ENST00000553923 STOML1Q9UBI4 398 aa5.68□□□□□ -1.5
SRP54-204ENST00000553923 LINC01387J3KSC0 135 aa5.67□□□□□ -1.5
SRP54-204ENST00000553923 LMOD1P29536 600 aaPredicted RBP5.67□□□□□ -1.5
SRP54-204ENST00000553923 NFIAQ12857 509 aa5.67□□□□□ -1.5
SRP54-204ENST00000553923 NLRP13Q86W25 1043 aa5.67□□□□□ -1.5
SRP54-204ENST00000553923 OR13H1Q8NG92 308 aa5.67□□□□□ -1.5
SRP54-204ENST00000553923 FAM46AQ96IP4 442 aaKnown RBP5.67□□□□□ -1.5
SRP54-204ENST00000553923 DHX15O43143 795 aaKnown RBP5.66□□□□□ -1.5
SRP54-204ENST00000553923 PTCD1O75127 700 aaKnown RBP5.66□□□□□ -1.5
SRP54-204ENST00000553923 CD68P34810 354 aaPredicted RBP5.66□□□□□ -1.5
SRP54-204ENST00000553923 KIAA1211Q6ZU35 1233 aa5.66□□□□□ -1.5
SRP54-204ENST00000553923 DTX1Q86Y01 620 aa5.66□□□□□ -1.5
SRP54-204ENST00000553923 VTI1AQ96AJ9 217 aa5.66□□□□□ -1.5
SRP54-204ENST00000553923 SAP130Q9H0E3 1048 aa5.66□□□□□ -1.5
SRP54-204ENST00000553923 RBSNQ9H1K0 784 aa5.66□□□□□ -1.5
SRP54-204ENST00000553923 C7orf69Q9H7B7 122 aa5.66□□□□□ -1.5
SRP54-204ENST00000553923 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.66□□□□□ -1.5
SRP54-204ENST00000553923 ATP11AP98196 1134 aa5.65□□□□□ -1.5
SRP54-204ENST00000553923 UVSSAQ2YD98 709 aa5.65□□□□□ -1.5
SRP54-204ENST00000553923 CFAP70Q5T0N1 1121 aa5.65□□□□□ -1.5
SRP54-204ENST00000553923 RNF43Q68DV7 783 aa5.65□□□□□ -1.5
SRP54-204ENST00000553923 FAM200AQ8TCP9 573 aa5.65□□□□□ -1.5
SRP54-204ENST00000553923 CALR3Q96L12 384 aaKnown RBP5.65□□□□□ -1.5
SRP54-204ENST00000553923 HMX2A2RU54 273 aa5.64□□□□□ -1.51
SRP54-204ENST00000553923 TNFRSF10BO14763 440 aa5.64□□□□□ -1.51
SRP54-204ENST00000553923 ADAM11O75078 769 aa5.64□□□□□ -1.51
SRP54-204ENST00000553923 KIF4AO95239 1232 aa5.64□□□□□ -1.51
SRP54-204ENST00000553923 YBX3P16989 372 aaKnown RBP eCLIP5.64□□□□□ -1.51
SRP54-204ENST00000553923 OCLNQ16625 522 aa5.64□□□□□ -1.51
SRP54-204ENST00000553923 INTS5Q6P9B9 1019 aaKnown RBP5.64□□□□□ -1.51
SRP54-204ENST00000553923 TXNDC11Q6PKC3 985 aa5.64□□□□□ -1.51
SRP54-204ENST00000553923 TRIM42Q8IWZ5 723 aa5.64□□□□□ -1.51
SRP54-204ENST00000553923 MYRFLQ96LU7 910 aa5.64□□□□□ -1.51
SRP54-204ENST00000553923 BRD2P25440 801 aaKnown RBP5.63□□□□□ -1.51
SRP54-204ENST00000553923 CDC27P30260 824 aa5.63□□□□□ -1.51
SRP54-204ENST00000553923 FAM69CQ0P6D2 419 aa5.63□□□□□ -1.51
SRP54-204ENST00000553923 LCE1DQ5T752 114 aa5.63□□□□□ -1.51
SRP54-204ENST00000553923 CEP135Q66GS9 1140 aa5.63□□□□□ -1.51
SRP54-204ENST00000553923 ACAD11Q709F0 780 aa5.63□□□□□ -1.51
SRP54-204ENST00000553923 FOXD4L4Q8WXT5 416 aaPredicted RBP5.63□□□□□ -1.51
SRP54-204ENST00000553923 DBNDD2Q9BQY9 259 aa5.63□□□□□ -1.51
SRP54-204ENST00000553923 CEP41Q9BYV8 373 aa5.63□□□□□ -1.51
SRP54-204ENST00000553923 LACRTQ9GZZ8 138 aa5.63□□□□□ -1.51
SRP54-204ENST00000553923 RASSF4Q9H2L5 321 aa5.63□□□□□ -1.51
SRP54-204ENST00000553923 A6NJR5 290 aa5.62□□□□□ -1.51
SRP54-204ENST00000553923 FSCN2O14926 492 aa5.62□□□□□ -1.51
SRP54-204ENST00000553923 DDX3YO15523 660 aaKnown RBP5.62□□□□□ -1.51
SRP54-204ENST00000553923 EPHA1P21709 976 aa5.62□□□□□ -1.51
SRP54-204ENST00000553923 HYAL2Q12891 473 aa5.62□□□□□ -1.51
SRP54-204ENST00000553923 FAM20CQ8IXL6 584 aa5.62□□□□□ -1.51
SRP54-204ENST00000553923 UTP4Q969X6 686 aaKnown RBP5.62□□□□□ -1.51
SRP54-204ENST00000553923 COL26A1Q96A83 441 aa5.62□□□□□ -1.51
SRP54-204ENST00000553923 PRIMPOLQ96LW4 560 aa5.62□□□□□ -1.51
SRP54-204ENST00000553923 FAM83CQ9BQN1 747 aa5.62□□□□□ -1.51
SRP54-204ENST00000553923 CARD10Q9BWT7 1032 aa5.62□□□□□ -1.51
SRP54-204ENST00000553923 ADAM19Q9H013 955 aa5.62□□□□□ -1.51
SRP54-204ENST00000553923 RNF114Q9Y508 228 aa5.62□□□□□ -1.51
SRP54-204ENST00000553923 UBAP1LF5GYI3 381 aa5.61□□□□□ -1.51
SRP54-204ENST00000553923 PRKCSHP14314 528 aaPredicted RBP5.61□□□□□ -1.51
SRP54-204ENST00000553923 SWI5Q1ZZU3 235 aa5.61□□□□□ -1.51
SRP54-204ENST00000553923 C16orf46Q6P387 395 aa5.61□□□□□ -1.51
SRP54-204ENST00000553923 CAPN12Q6ZSI9 719 aa5.61□□□□□ -1.51
SRP54-204ENST00000553923 CLEC10AQ8IUN9 316 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms