RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 HELQQ8TDG4 1101 aa8.07□□□□□ -1.12
SCFD1-210ENST00000553693 SEPT3Q9UH03 358 aa8.07□□□□□ -1.12
SCFD1-210ENST00000553693 TMEM88BA6NKF7 163 aa8.06□□□□□ -1.12
SCFD1-210ENST00000553693 ZBTB42B2RXF5 422 aa8.06□□□□□ -1.12
SCFD1-210ENST00000553693 UBAP1LF5GYI3 381 aa8.06□□□□□ -1.12
SCFD1-210ENST00000553693 H2AFB1P0C5Y9 115 aa8.06□□□□□ -1.12
SCFD1-210ENST00000553693 H2AFB2P0C5Z0 115 aa8.06□□□□□ -1.12
SCFD1-210ENST00000553693 ELNP15502 786 aa8.06□□□□□ -1.12
SCFD1-210ENST00000553693 YBX3P16989 372 aaKnown RBP eCLIP8.06□□□□□ -1.126e-7■■■□□ 16.2
SCFD1-210ENST00000553693 FAM26DQ5JW98 314 aa8.06□□□□□ -1.12
SCFD1-210ENST00000553693 PERM1Q5SV97 790 aa8.06□□□□□ -1.12
SCFD1-210ENST00000553693 TTC9Q92623 222 aa8.06□□□□□ -1.12
SCFD1-210ENST00000553693 FMNL2Q96PY5 1086 aa8.06□□□□□ -1.12
SCFD1-210ENST00000553693 LPIN3Q9BQK8 851 aa8.06□□□□□ -1.12
SCFD1-210ENST00000553693 RBSNQ9H1K0 784 aa8.06□□□□□ -1.12
SCFD1-210ENST00000553693 A0A0A0MRY4 1105 aa8.05□□□□□ -1.12
SCFD1-210ENST00000553693 MMP20O60882 483 aa8.05□□□□□ -1.12
SCFD1-210ENST00000553693 MTMR7Q9Y216 660 aa8.05□□□□□ -1.12
SCFD1-210ENST00000553693 GHRHP01286 108 aa8.04□□□□□ -1.12
SCFD1-210ENST00000553693 RPLP1P05386 114 aaKnown RBP8.04□□□□□ -1.12
SCFD1-210ENST00000553693 WFDC8Q8IUA0 241 aa8.04□□□□□ -1.12
SCFD1-210ENST00000553693 DTWD1Q8N5C7 304 aa8.04□□□□□ -1.12
SCFD1-210ENST00000553693 GPR152Q8TDT2 470 aa8.04□□□□□ -1.12
SCFD1-210ENST00000553693 COL17A1Q9UMD9 1497 aaPredicted RBP8.04□□□□□ -1.12
SCFD1-210ENST00000553693 SSFA2P28290 1259 aa8.03□□□□□ -1.12
SCFD1-210ENST00000553693 TXKP42681 527 aa8.03□□□□□ -1.12
SCFD1-210ENST00000553693 MSL1Q68DK7 614 aa8.03□□□□□ -1.12
SCFD1-210ENST00000553693 HFE2Q6ZVN8 426 aa8.03□□□□□ -1.12
SCFD1-210ENST00000553693 DMRTC2Q8IXT2 367 aaPredicted RBP8.03□□□□□ -1.12
SCFD1-210ENST00000553693 NSUN5Q96P11 429 aaKnown RBP8.03□□□□□ -1.12
SCFD1-210ENST00000553693 SMG9Q9H0W8 520 aaKnown RBP8.03□□□□□ -1.12
SCFD1-210ENST00000553693 LOC102724428A0A0B4J2F2 783 aa8.02□□□□□ -1.13
SCFD1-210ENST00000553693 C9orf172C9J069 976 aa8.02□□□□□ -1.13
SCFD1-210ENST00000553693 ZBTB39O15060 712 aa8.02□□□□□ -1.13
SCFD1-210ENST00000553693 PAX4O43316 350 aa8.02□□□□□ -1.13
SCFD1-210ENST00000553693 PCSK2P16519 638 aa8.02□□□□□ -1.13
SCFD1-210ENST00000553693 SIK1P57059 783 aa8.02□□□□□ -1.13
SCFD1-210ENST00000553693 B4GALNT3Q6L9W6 998 aa8.02□□□□□ -1.13
SCFD1-210ENST00000553693 FMR1NBQ8N0W7 255 aaPredicted RBP8.02□□□□□ -1.13
SCFD1-210ENST00000553693 OR13H1Q8NG92 308 aa8.02□□□□□ -1.13
SCFD1-210ENST00000553693 PLD4Q96BZ4 506 aa8.02□□□□□ -1.13
SCFD1-210ENST00000553693 USTQ9Y2C2 406 aa8.02□□□□□ -1.13
SCFD1-210ENST00000553693 NRG1Q02297 640 aaPredicted RBP8.01□□□□□ -1.13
SCFD1-210ENST00000553693 GRIK4Q16099 956 aa8.01□□□□□ -1.13
SCFD1-210ENST00000553693 GRIK5Q16478 980 aa8.01□□□□□ -1.13
SCFD1-210ENST00000553693 TTC39BQ5VTQ0 682 aaPredicted RBP8.01□□□□□ -1.13
SCFD1-210ENST00000553693 PDE12Q6L8Q7 609 aaKnown RBP8.01□□□□□ -1.13
SCFD1-210ENST00000553693 GTF3C2Q8WUA4 911 aaPredicted RBP8.01□□□□□ -1.13
SCFD1-210ENST00000553693 HYAL2Q12891 473 aa8□□□□□ -1.13
SCFD1-210ENST00000553693 NOM1Q5C9Z4 860 aaKnown RBP8□□□□□ -1.13
SCFD1-210ENST00000553693 ALKBH2Q6NS38 261 aa8□□□□□ -1.13
SCFD1-210ENST00000553693 TTC16Q8NEE8 873 aa8□□□□□ -1.13
SCFD1-210ENST00000553693 NUDT16Q96DE0 195 aaKnown RBP8□□□□□ -1.13
SCFD1-210ENST00000553693 ABI2Q9NYB9 513 aaPredicted RBP8□□□□□ -1.13
SCFD1-210ENST00000553693 J3QW42 95 aa7.99□□□□□ -1.13
SCFD1-210ENST00000553693 ILDR2Q71H61 639 aa7.99□□□□□ -1.13
SCFD1-210ENST00000553693 ZNF438Q7Z4V0 828 aa7.99□□□□□ -1.13
SCFD1-210ENST00000553693 CACTIN-AS1Q8N1I8 211 aa7.99□□□□□ -1.13
SCFD1-210ENST00000553693 LENG1Q96BZ8 264 aaPredicted RBP7.99□□□□□ -1.13
SCFD1-210ENST00000553693 SPACA7Q96KW9 195 aa7.99□□□□□ -1.13
SCFD1-210ENST00000553693 MPSTP25325 297 aa7.98□□□□□ -1.13
SCFD1-210ENST00000553693 SCNN1AP37088 669 aa7.98□□□□□ -1.13
SCFD1-210ENST00000553693 ATCAYQ86WG3 371 aa7.98□□□□□ -1.13
SCFD1-210ENST00000553693 FBXO11Q86XK2 927 aa7.98□□□□□ -1.13
SCFD1-210ENST00000553693 DCAF11Q8TEB1 546 aa7.98□□□□□ -1.13
SCFD1-210ENST00000553693 EDEM1Q92611 657 aa7.98□□□□□ -1.13
SCFD1-210ENST00000553693 ARID1BQ8NFD5 2236 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-210ENST00000553693 SELPP16109 830 aa7.97□□□□□ -1.13
SCFD1-210ENST00000553693 MZF1P28698 734 aaPredicted RBP7.97□□□□□ -1.13
SCFD1-210ENST00000553693 EIF1AXP47813 144 aaKnown RBP7.97□□□□□ -1.13
SCFD1-210ENST00000553693 DNM1Q05193 864 aaKnown RBP7.97□□□□□ -1.13
SCFD1-210ENST00000553693 SF3B2Q13435 895 aaKnown RBP7.97□□□□□ -1.13
SCFD1-210ENST00000553693 FZD5Q13467 585 aa7.97□□□□□ -1.13
SCFD1-210ENST00000553693 ADGRE1Q14246 886 aa7.97□□□□□ -1.13
SCFD1-210ENST00000553693 MBTPS1Q14703 1052 aa7.97□□□□□ -1.13
SCFD1-210ENST00000553693 ELP3Q9H9T3 547 aa7.97□□□□□ -1.13
SCFD1-210ENST00000553693 SRA1Q9HD15 236 aaKnown RBP7.97□□□□□ -1.13
SCFD1-210ENST00000553693 USP21Q9UK80 565 aa7.97□□□□□ -1.13
SCFD1-210ENST00000553693 SMNDC1O75940 238 aaKnown RBP eCLIP7.96□□□□□ -1.14
SCFD1-210ENST00000553693 FAM13AO94988 1023 aa7.96□□□□□ -1.14
SCFD1-210ENST00000553693 GDF6Q6KF10 455 aaPredicted RBP7.96□□□□□ -1.14
SCFD1-210ENST00000553693 MAP4K3Q8IVH8 894 aa7.96□□□□□ -1.14
SCFD1-210ENST00000553693 MUC3BQ9H195 1237 aa7.96□□□□□ -1.14
SCFD1-210ENST00000553693 KIF4AO95239 1232 aa7.95□□□□□ -1.14
SCFD1-210ENST00000553693 PDGFAP04085 211 aa7.95□□□□□ -1.14
SCFD1-210ENST00000553693 NPR3P17342 541 aa7.95□□□□□ -1.14
SCFD1-210ENST00000553693 PHLDB3Q6NSJ2 640 aa7.95□□□□□ -1.14
SCFD1-210ENST00000553693 SHISA2Q6UWI4 295 aa7.95□□□□□ -1.14
SCFD1-210ENST00000553693 TXNRD3Q86VQ6 643 aa7.95□□□□□ -1.14
SCFD1-210ENST00000553693 USP5P45974 858 aa7.94□□□□□ -1.14
SCFD1-210ENST00000553693 MTMR3Q13615 1198 aa7.94□□□□□ -1.14
SCFD1-210ENST00000553693 AAMPQ13685 434 aa7.94□□□□□ -1.14
SCFD1-210ENST00000553693 XKR5Q6UX68 686 aa7.94□□□□□ -1.14
SCFD1-210ENST00000553693 IL22RA1Q8N6P7 574 aa7.94□□□□□ -1.14
SCFD1-210ENST00000553693 ARID3AQ99856 593 aa7.94□□□□□ -1.14
SCFD1-210ENST00000553693 TMEM63CQ9P1W3 806 aa7.94□□□□□ -1.14
SCFD1-210ENST00000553693 TRIM33Q9UPN9 1127 aa7.94□□□□□ -1.14
SCFD1-210ENST00000553693 FAM177BA6PVY3 158 aa7.93□□□□□ -1.14
SCFD1-210ENST00000553693 ABL1P00519 1130 aa7.93□□□□□ -1.14
SCFD1-210ENST00000553693 FKBP4Q02790 459 aaKnown RBP eCLIP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms