RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 FAM157BP0CG42 384 aa5.91□□□□□ -1.46
TDP1-207ENST00000553617 CES1P23141 567 aa5.91□□□□□ -1.46
TDP1-207ENST00000553617 MAP3K10Q02779 954 aa5.91□□□□□ -1.46
TDP1-207ENST00000553617 LBRQ14739 615 aaKnown RBP5.91□□□□□ -1.46
TDP1-207ENST00000553617 LCE2CQ5TA81 110 aa5.91□□□□□ -1.46
TDP1-207ENST00000553617 MCF2L2Q86YR7 1114 aa5.91□□□□□ -1.46
TDP1-207ENST00000553617 TRIM47Q96LD4 638 aa5.91□□□□□ -1.46
TDP1-207ENST00000553617 COPRSQ9NQ92 184 aa5.91□□□□□ -1.46
TDP1-207ENST00000553617 GJA3Q9Y6H8 435 aa5.91□□□□□ -1.46
TDP1-207ENST00000553617 SENP3-EIF4A1A0A087X0R7 540 aa5.9□□□□□ -1.46
TDP1-207ENST00000553617 SOBPA7XYQ1 873 aa5.9□□□□□ -1.46
TDP1-207ENST00000553617 ATF4P18848 351 aaPredicted RBP5.9□□□□□ -1.46
TDP1-207ENST00000553617 CANXP27824 592 aaKnown RBP5.9□□□□□ -1.46
TDP1-207ENST00000553617 GTF2F1P35269 517 aaKnown RBP eCLIP5.9□□□□□ -1.46
TDP1-207ENST00000553617 PAK2Q13177 524 aa5.9□□□□□ -1.46
TDP1-207ENST00000553617 UBAP2LQ14157 1087 aaKnown RBP5.9□□□□□ -1.46
TDP1-207ENST00000553617 SCARF1Q14162 830 aa5.9□□□□□ -1.46
TDP1-207ENST00000553617 TTC39BQ5VTQ0 682 aaPredicted RBP5.9□□□□□ -1.46
TDP1-207ENST00000553617 GIMAP6Q6P9H5 292 aa5.9□□□□□ -1.46
TDP1-207ENST00000553617 OR13H1Q8NG92 308 aa5.9□□□□□ -1.46
TDP1-207ENST00000553617 RASGRP4Q8TDF6 673 aa5.9□□□□□ -1.46
TDP1-207ENST00000553617 RSRP1Q9BUV0 290 aa5.9□□□□□ -1.46
TDP1-207ENST00000553617 GSX2Q9BZM3 304 aa5.9□□□□□ -1.46
TDP1-207ENST00000553617 SENP2Q9HC62 589 aa5.9□□□□□ -1.46
TDP1-207ENST00000553617 LATS2Q9NRM7 1088 aa5.9□□□□□ -1.46
TDP1-207ENST00000553617 SALL4Q9UJQ4 1053 aa5.9□□□□□ -1.46
TDP1-207ENST00000553617 DNMT3LQ9UJW3 386 aa5.9□□□□□ -1.46
TDP1-207ENST00000553617 TRAK1Q9UPV9 953 aa5.9□□□□□ -1.46
TDP1-207ENST00000553617 KCNH4Q9UQ05 1017 aa5.9□□□□□ -1.46
TDP1-207ENST00000553617 TERTO14746 1132 aaKnown RBP5.89□□□□□ -1.47
TDP1-207ENST00000553617 MMP20O60882 483 aa5.89□□□□□ -1.47
TDP1-207ENST00000553617 SASH3O75995 380 aa5.89□□□□□ -1.47
TDP1-207ENST00000553617 EDN3P14138 238 aa5.89□□□□□ -1.47
TDP1-207ENST00000553617 INSM1Q01101 510 aaPredicted RBP5.89□□□□□ -1.47
TDP1-207ENST00000553617 SFSWAPQ12872 951 aaKnown RBP5.89□□□□□ -1.47
TDP1-207ENST00000553617 PGBD3Q8N328 593 aa5.89□□□□□ -1.47
TDP1-207ENST00000553617 GPRASP2Q96D09 838 aa5.89□□□□□ -1.47
TDP1-207ENST00000553617 ZFP42Q96MM3 310 aa5.89□□□□□ -1.47
TDP1-207ENST00000553617 ABCB6Q9NP58 842 aa5.89□□□□□ -1.47
TDP1-207ENST00000553617 KBTBD4Q9NVX7 518 aa5.89□□□□□ -1.47
TDP1-207ENST00000553617 ZFATQ9P243 1243 aa5.89□□□□□ -1.47
TDP1-207ENST00000553617 KANSL3Q9P2N6 904 aa5.89□□□□□ -1.47
TDP1-207ENST00000553617 KIF4AO95239 1232 aa5.88□□□□□ -1.47
TDP1-207ENST00000553617 HOXD8P13378 290 aaPredicted RBP5.88□□□□□ -1.47
TDP1-207ENST00000553617 HSP90B1P14625 803 aaKnown RBP5.88□□□□□ -1.47
TDP1-207ENST00000553617 CCINQ13939 588 aa5.88□□□□□ -1.47
TDP1-207ENST00000553617 EFHC2Q5JST6 749 aa5.88□□□□□ -1.47
TDP1-207ENST00000553617 NOP9Q86U38 636 aaKnown RBP5.88□□□□□ -1.47
TDP1-207ENST00000553617 CNTNAP3BQ96NU0 1288 aa5.88□□□□□ -1.47
TDP1-207ENST00000553617 TCF12Q99081 682 aa5.88□□□□□ -1.47
TDP1-207ENST00000553617 CNTNAP3Q9BZ76 1288 aa5.88□□□□□ -1.47
TDP1-207ENST00000553617 EHD4Q9H223 541 aa5.88□□□□□ -1.47
TDP1-207ENST00000553617 HCN2Q9UL51 889 aa5.88□□□□□ -1.47
TDP1-207ENST00000553617 PPM1HQ9ULR3 514 aa5.88□□□□□ -1.47
TDP1-207ENST00000553617 TTF2Q9UNY4 1162 aaKnown RBP5.88□□□□□ -1.47
TDP1-207ENST00000553617 ATXN7O15265 892 aaPredicted RBP5.87□□□□□ -1.47
TDP1-207ENST00000553617 XRCC5P13010 732 aaKnown RBP5.87□□□□□ -1.47
TDP1-207ENST00000553617 TARSP26639 723 aaKnown RBP5.87□□□□□ -1.47
TDP1-207ENST00000553617 SOX18P35713 384 aa5.87□□□□□ -1.47
TDP1-207ENST00000553617 LAMC2Q13753 1193 aa5.87□□□□□ -1.47
TDP1-207ENST00000553617 CCDC144BQ3MJ40 725 aa5.87□□□□□ -1.47
TDP1-207ENST00000553617 FIGNL1Q6PIW4 674 aa5.87□□□□□ -1.47
TDP1-207ENST00000553617 VPS37DQ86XT2 251 aa5.87□□□□□ -1.47
TDP1-207ENST00000553617 KIFC2Q96AC6 838 aa5.87□□□□□ -1.47
TDP1-207ENST00000553617 GAS2L1Q99501 681 aaPredicted RBP5.87□□□□□ -1.47
TDP1-207ENST00000553617 KCNQ5Q9NR82 932 aa5.87□□□□□ -1.47
TDP1-207ENST00000553617 ADAMTS1Q9UHI8 967 aa5.87□□□□□ -1.47
TDP1-207ENST00000553617 TMEM238LA0A1B0GVL6 79 aa5.86□□□□□ -1.47
TDP1-207ENST00000553617 PHF20L1A8MW92 1017 aa5.86□□□□□ -1.47
TDP1-207ENST00000553617 HMGB1P09429 215 aaKnown RBP5.86□□□□□ -1.47
TDP1-207ENST00000553617 FCGRTP55899 365 aa5.86□□□□□ -1.47
TDP1-207ENST00000553617 TNP2Q05952 138 aa5.86□□□□□ -1.47
TDP1-207ENST00000553617 PWP1Q13610 501 aa5.86□□□□□ -1.47
TDP1-207ENST00000553617 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.86□□□□□ -1.47
TDP1-207ENST00000553617 COL13A1Q5TAT6 717 aaPredicted RBP5.86□□□□□ -1.47
TDP1-207ENST00000553617 KRT25Q7Z3Z0 450 aa5.86□□□□□ -1.47
TDP1-207ENST00000553617 CCNJLQ8IV13 435 aa5.86□□□□□ -1.47
TDP1-207ENST00000553617 RHOVQ96L33 236 aa5.86□□□□□ -1.47
TDP1-207ENST00000553617 TRIM56Q9BRZ2 755 aaKnown RBP5.86□□□□□ -1.47
TDP1-207ENST00000553617 HIRIP3Q9BW71 556 aaPredicted RBP5.86□□□□□ -1.47
TDP1-207ENST00000553617 OXCT2Q9BYC2 517 aaPredicted RBP5.86□□□□□ -1.47
TDP1-207ENST00000553617 EFCC1Q9HA90 598 aa5.86□□□□□ -1.47
TDP1-207ENST00000553617 LIN7BQ9HAP6 207 aa5.86□□□□□ -1.47
TDP1-207ENST00000553617 STRN4Q9NRL3 753 aa5.86□□□□□ -1.47
TDP1-207ENST00000553617 NDFIP2Q9NV92 336 aa5.86□□□□□ -1.47
TDP1-207ENST00000553617 PPP4R2Q9NY27 417 aa5.86□□□□□ -1.47
TDP1-207ENST00000553617 PCDHGC4Q9Y5F7 938 aa5.86□□□□□ -1.47
TDP1-207ENST00000553617 DCDC2BA2VCK2 349 aa5.85□□□□□ -1.47
TDP1-207ENST00000553617 MAP3K6O95382 1288 aa5.85□□□□□ -1.47
TDP1-207ENST00000553617 RARAP10276 462 aa5.85□□□□□ -1.47
TDP1-207ENST00000553617 GRIN2CQ14957 1233 aa5.85□□□□□ -1.47
TDP1-207ENST00000553617 CCDC85BQ15834 202 aaPredicted RBP5.85□□□□□ -1.47
TDP1-207ENST00000553617 SOGA3Q5TF21 947 aa5.85□□□□□ -1.47
TDP1-207ENST00000553617 SV2BQ7L1I2 683 aa5.85□□□□□ -1.47
TDP1-207ENST00000553617 KIAA0825Q8IV33 1275 aa5.85□□□□□ -1.47
TDP1-207ENST00000553617 SEC16BQ96JE7 1060 aa5.85□□□□□ -1.47
TDP1-207ENST00000553617 TMEM74Q96NL1 305 aa5.85□□□□□ -1.47
TDP1-207ENST00000553617 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.85□□□□□ -1.472e-6■■□□□ 12.6
TDP1-207ENST00000553617 ZKSCAN3Q9BRR0 538 aa5.85□□□□□ -1.47
TDP1-207ENST00000553617 SPON2Q9BUD6 331 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms