RNA–Protein interactions for RNA: ENST00000549913.6

RPH3A-217, Transcript of rabphilin 3A, humanhuman

TSL 1 (best)

Gene RPH3A, Length 5,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-217ENST00000549913 MSH6P52701 1360 aa12.93□□□□□ -0.34
RPH3A-217ENST00000549913 NCKAP5LQ9HCH0 1330 aa12.93□□□□□ -0.34
RPH3A-217ENST00000549913 IL13P35225 146 aa12.93□□□□□ -0.34
RPH3A-217ENST00000549913 PAG1Q9NWQ8 432 aa12.93□□□□□ -0.34
RPH3A-217ENST00000549913 DNAI1Q9UI46 699 aa12.93□□□□□ -0.34
RPH3A-217ENST00000549913 RAD50Q92878 1312 aa12.93□□□□□ -0.34
RPH3A-217ENST00000549913 HOXC9P31274 260 aa12.93□□□□□ -0.34
RPH3A-217ENST00000549913 SPTY2D1Q68D10 685 aaPredicted RBP12.93□□□□□ -0.34
RPH3A-217ENST00000549913 RUFY3Q7L099 469 aa12.93□□□□□ -0.34
RPH3A-217ENST00000549913 CNNM2Q9H8M5 875 aa12.93□□□□□ -0.34
RPH3A-217ENST00000549913 PTGS1P23219 599 aa12.93□□□□□ -0.34
RPH3A-217ENST00000549913 ZNF445P59923 1031 aa12.93□□□□□ -0.34
RPH3A-217ENST00000549913 NFATC2IPQ8NCF5 419 aa12.93□□□□□ -0.34
RPH3A-217ENST00000549913 KAT14Q9H8E8 782 aa12.93□□□□□ -0.34
RPH3A-217ENST00000549913 TRIM35Q9UPQ4 493 aa12.93□□□□□ -0.34
RPH3A-217ENST00000549913 SLU7O95391 586 aaKnown RBP12.92□□□□□ -0.34
RPH3A-217ENST00000549913 GCP02774 474 aa12.92□□□□□ -0.34
RPH3A-217ENST00000549913 VPS36Q86VN1 386 aa12.92□□□□□ -0.34
RPH3A-217ENST00000549913 OTUD7AQ8TE49 926 aaPredicted RBP12.92□□□□□ -0.34
RPH3A-217ENST00000549913 PHF23Q9BUL5 403 aaPredicted RBP12.92□□□□□ -0.34
RPH3A-217ENST00000549913 CCDC94Q9BW85 323 aaPredicted RBP12.92□□□□□ -0.34
RPH3A-217ENST00000549913 EDC4Q6P2E9 1401 aaKnown RBP12.92□□□□□ -0.34
RPH3A-217ENST00000549913 SPATA31E1Q6ZUB1 1445 aa12.92□□□□□ -0.34
RPH3A-217ENST00000549913 BMP15O95972 392 aa12.92□□□□□ -0.34
RPH3A-217ENST00000549913 AMPD3Q01432 767 aa12.92□□□□□ -0.34
RPH3A-217ENST00000549913 TNIP1Q15025 636 aa12.92□□□□□ -0.34
RPH3A-217ENST00000549913 SEPT7Q16181 437 aaKnown RBP12.92□□□□□ -0.34
RPH3A-217ENST00000549913 SLC9C2Q5TAH2 1124 aa12.92□□□□□ -0.34
RPH3A-217ENST00000549913 G2E3Q7L622 706 aa12.92□□□□□ -0.34
RPH3A-217ENST00000549913 IP6K1Q92551 441 aa12.92□□□□□ -0.34
RPH3A-217ENST00000549913 ESR2Q92731 530 aa12.92□□□□□ -0.34
RPH3A-217ENST00000549913 SMARCC1Q92922 1105 aaPredicted RBP12.92□□□□□ -0.34
RPH3A-217ENST00000549913 TRERF1Q96PN7 1200 aa12.92□□□□□ -0.34
RPH3A-217ENST00000549913 CRNKL1Q9BZJ0 848 aaKnown RBP12.92□□□□□ -0.34
RPH3A-217ENST00000549913 ZSWIM4Q9H7M6 989 aa12.92□□□□□ -0.34
RPH3A-217ENST00000549913 BABAM1Q9NWV8 329 aa12.92□□□□□ -0.34
RPH3A-217ENST00000549913 MTIF2P46199 727 aaKnown RBP12.92□□□□□ -0.34
RPH3A-217ENST00000549913 LUZP1Q86V48 1076 aa12.92□□□□□ -0.34
RPH3A-217ENST00000549913 CALML4Q96GE6 196 aa12.92□□□□□ -0.34
RPH3A-217ENST00000549913 NGLY1Q96IV0 654 aa12.92□□□□□ -0.34
RPH3A-217ENST00000549913 DDX21Q9NR30 783 aaKnown RBP eCLIP12.92□□□□□ -0.34
RPH3A-217ENST00000549913 TBX22Q9Y458 520 aa12.92□□□□□ -0.34
RPH3A-217ENST00000549913 C6orf229H3BNL8 230 aa12.91□□□□□ -0.34
RPH3A-217ENST00000549913 SAMD9Q5K651 1589 aa12.91□□□□□ -0.34
RPH3A-217ENST00000549913 CHL1O00533 1208 aa12.91□□□□□ -0.34
RPH3A-217ENST00000549913 N4BP3O15049 544 aa12.91□□□□□ -0.34
RPH3A-217ENST00000549913 NBPF7P0C2Y1 421 aaPredicted RBP12.91□□□□□ -0.34
RPH3A-217ENST00000549913 CALRP27797 417 aaKnown RBP12.91□□□□□ -0.34
RPH3A-217ENST00000549913 ENOX2Q16206 610 aaKnown RBP12.91□□□□□ -0.34
RPH3A-217ENST00000549913 PTPRTO14522 1441 aa12.91□□□□□ -0.34
RPH3A-217ENST00000549913 KAT6BQ8WYB5 2073 aa12.91□□□□□ -0.34
RPH3A-217ENST00000549913 SPTLC2O15270 562 aa12.91□□□□□ -0.34
RPH3A-217ENST00000549913 IDEP14735 1019 aa12.91□□□□□ -0.34
RPH3A-217ENST00000549913 LMAN1P49257 510 aa12.91□□□□□ -0.34
RPH3A-217ENST00000549913 RTN1Q16799 776 aa12.91□□□□□ -0.34
RPH3A-217ENST00000549913 ATP7AQ04656 1500 aa12.91□□□□□ -0.34
RPH3A-217ENST00000549913 PRC1O43663 620 aa12.9□□□□□ -0.34
RPH3A-217ENST00000549913 CYP7A1P22680 504 aa12.9□□□□□ -0.34
RPH3A-217ENST00000549913 DCAF5Q96JK2 942 aa12.9□□□□□ -0.34
RPH3A-217ENST00000549913 SRRTQ9BXP5 876 aaKnown RBP12.9□□□□□ -0.34
RPH3A-217ENST00000549913 UBA5Q9GZZ9 404 aa12.9□□□□□ -0.34
RPH3A-217ENST00000549913 ARFGAP3Q9NP61 516 aa12.9□□□□□ -0.34
RPH3A-217ENST00000549913 RTL1A6NKG5 1358 aa12.9□□□□□ -0.34
RPH3A-217ENST00000549913 RNMTO43148 476 aaKnown RBP12.9□□□□□ -0.34
RPH3A-217ENST00000549913 MAPK8IP2Q13387 824 aaPredicted RBP12.9□□□□□ -0.34
RPH3A-217ENST00000549913 TDRD12Q587J7 1177 aaKnown RBP12.9□□□□□ -0.34
RPH3A-217ENST00000549913 FAM107BQ9H098 131 aa12.9□□□□□ -0.34
RPH3A-217ENST00000549913 ZMYM3Q14202 1370 aa12.9□□□□□ -0.34
RPH3A-217ENST00000549913 ALS2CR12Q96Q35 445 aa12.9□□□□□ -0.34
RPH3A-217ENST00000549913 KCNA6P17658 529 aa12.9□□□□□ -0.35
RPH3A-217ENST00000549913 MARCKSP29966 332 aaPredicted RBP12.9□□□□□ -0.35
RPH3A-217ENST00000549913 ANKRD18AQ8IVF6 992 aa12.9□□□□□ -0.35
RPH3A-217ENST00000549913 CTAGE1Q96RT6 745 aa12.9□□□□□ -0.35
RPH3A-217ENST00000549913 SLC4A4Q9Y6R1 1079 aa12.9□□□□□ -0.35
RPH3A-217ENST00000549913 RNF113AO15541 343 aaKnown RBP12.89□□□□□ -0.35
RPH3A-217ENST00000549913 HOXB7P09629 217 aa12.89□□□□□ -0.35
RPH3A-217ENST00000549913 CUL5Q93034 780 aa12.89□□□□□ -0.35
RPH3A-217ENST00000549913 CTR9Q6PD62 1173 aa12.89□□□□□ -0.35
RPH3A-217ENST00000549913 DHX32Q7L7V1 743 aaKnown RBP12.89□□□□□ -0.35
RPH3A-217ENST00000549913 STX8Q9UNK0 236 aa12.89□□□□□ -0.35
RPH3A-217ENST00000549913 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.89□□□□□ -0.35
RPH3A-217ENST00000549913 SBNO1A3KN83 1393 aa12.89□□□□□ -0.35
RPH3A-217ENST00000549913 LMOD1P29536 600 aaPredicted RBP12.89□□□□□ -0.35
RPH3A-217ENST00000549913 FAM114A1Q8IWE2 563 aa12.89□□□□□ -0.35
RPH3A-217ENST00000549913 EHBP1Q8NDI1 1231 aa12.89□□□□□ -0.35
RPH3A-217ENST00000549913 TIGD1Q96MW7 591 aa12.89□□□□□ -0.35
RPH3A-217ENST00000549913 C19orf44Q9H6X5 657 aa12.89□□□□□ -0.35
RPH3A-217ENST00000549913 NAA15Q9BXJ9 866 aaKnown RBP12.88□□□□□ -0.35
RPH3A-217ENST00000549913 LMBRD1Q9NUN5 540 aa12.88□□□□□ -0.35
RPH3A-217ENST00000549913 DNA2P51530 1060 aa12.88□□□□□ -0.35
RPH3A-217ENST00000549913 TFCP2Q12800 502 aa12.88□□□□□ -0.35
RPH3A-217ENST00000549913 NBPF6Q5VWK0 638 aa12.88□□□□□ -0.35
RPH3A-217ENST00000549913 NBPF5PQ86XG9 351 aaPredicted RBP12.88□□□□□ -0.35
RPH3A-217ENST00000549913 NBPF4Q96M43 638 aa12.88□□□□□ -0.35
RPH3A-217ENST00000549913 GTPBP4Q9BZE4 634 aaKnown RBP12.88□□□□□ -0.35
RPH3A-217ENST00000549913 BICC1Q9H694 974 aaKnown RBP12.88□□□□□ -0.35
RPH3A-217ENST00000549913 VAT1LQ9HCJ6 419 aa12.88□□□□□ -0.35
RPH3A-217ENST00000549913 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.88□□□□□ -0.35
RPH3A-217ENST00000549913 V9GYY5 206 aaPredicted RBP12.88□□□□□ -0.35
RPH3A-217ENST00000549913 ABCA5Q8WWZ7 1642 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms