RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ILDR1Q86SU0 546 aaPredicted RBP6.15□□□□□ -1.43
SCAF11-212ENST00000549162 CCDC87Q9NVE4 849 aa6.15□□□□□ -1.43
SCAF11-212ENST00000549162 MYH6P13533 1939 aa6.15□□□□□ -1.43
SCAF11-212ENST00000549162 SLC26A4O43511 780 aa6.15□□□□□ -1.43
SCAF11-212ENST00000549162 DDX58O95786 925 aaKnown RBP6.15□□□□□ -1.43
SCAF11-212ENST00000549162 EXOSC9Q06265 439 aaKnown RBP6.15□□□□□ -1.43
SCAF11-212ENST00000549162 TM6SF1Q9BZW5 370 aa6.15□□□□□ -1.43
SCAF11-212ENST00000549162 RALGAPA2Q2PPJ7 1873 aa6.15□□□□□ -1.43
SCAF11-212ENST00000549162 CNTNAP1P78357 1384 aa6.14□□□□□ -1.43
SCAF11-212ENST00000549162 MYH4Q9Y623 1939 aa6.14□□□□□ -1.43
SCAF11-212ENST00000549162 HOXA7P31268 230 aaPredicted RBP6.14□□□□□ -1.43
SCAF11-212ENST00000549162 NUTM2DQ5VT03 806 aaPredicted RBP6.14□□□□□ -1.43
SCAF11-212ENST00000549162 IL1R1P14778 569 aa6.14□□□□□ -1.43
SCAF11-212ENST00000549162 FECHP22830 423 aa6.14□□□□□ -1.43
SCAF11-212ENST00000549162 RNF39Q9H2S5 420 aa6.14□□□□□ -1.43
SCAF11-212ENST00000549162 BTG4Q9NY30 223 aa6.14□□□□□ -1.43
SCAF11-212ENST00000549162 BTBD11A6QL63 1104 aa6.14□□□□□ -1.43
SCAF11-212ENST00000549162 PSEN1P49768 467 aa6.14□□□□□ -1.43
SCAF11-212ENST00000549162 FKBP1CQ5VVH2 108 aa6.14□□□□□ -1.43
SCAF11-212ENST00000549162 OXER1Q8TDS5 423 aa6.14□□□□□ -1.43
SCAF11-212ENST00000549162 CDC5LQ99459 802 aaKnown RBP6.14□□□□□ -1.43
SCAF11-212ENST00000549162 REPIN1Q9BWE0 567 aaKnown RBP6.14□□□□□ -1.43
SCAF11-212ENST00000549162 EXOC5O00471 708 aa6.13□□□□□ -1.43
SCAF11-212ENST00000549162 DNAAF4Q8WXU2 420 aa6.13□□□□□ -1.43
SCAF11-212ENST00000549162 PSMD1Q99460 953 aa6.13□□□□□ -1.43
SCAF11-212ENST00000549162 TBC1D2Q9BYX2 928 aa6.13□□□□□ -1.43
SCAF11-212ENST00000549162 PRDM11Q9NQV5 511 aa6.13□□□□□ -1.43
SCAF11-212ENST00000549162 DPYSL4O14531 572 aa6.13□□□□□ -1.43
SCAF11-212ENST00000549162 DSG3P32926 999 aa6.13□□□□□ -1.43
SCAF11-212ENST00000549162 ZNF330Q9Y3S2 320 aaPredicted RBP6.13□□□□□ -1.43
SCAF11-212ENST00000549162 CARNS1A5YM72 827 aa6.13□□□□□ -1.43
SCAF11-212ENST00000549162 LGR6Q9HBX8 967 aa6.13□□□□□ -1.43
SCAF11-212ENST00000549162 PGAP2Q9UHJ9 254 aa6.13□□□□□ -1.43
SCAF11-212ENST00000549162 RIPOR2Q9Y4F9 1068 aa6.13□□□□□ -1.43
SCAF11-212ENST00000549162 GAKO14976 1311 aa6.12□□□□□ -1.43
SCAF11-212ENST00000549162 NEFMP07197 916 aa6.12□□□□□ -1.43
SCAF11-212ENST00000549162 ATP5JP18859 108 aa6.12□□□□□ -1.43
SCAF11-212ENST00000549162 SMARCA1P28370 1054 aa6.12□□□□□ -1.43
SCAF11-212ENST00000549162 MYH7BA7E2Y1 1941 aa6.12□□□□□ -1.43
SCAF11-212ENST00000549162 SH3D19Q5HYK7 790 aa6.12□□□□□ -1.43
SCAF11-212ENST00000549162 ATG9AQ7Z3C6 839 aa6.12□□□□□ -1.43
SCAF11-212ENST00000549162 PI4K2BQ8TCG2 481 aa6.12□□□□□ -1.43
SCAF11-212ENST00000549162 DDB1Q16531 1140 aa6.12□□□□□ -1.43
SCAF11-212ENST00000549162 NLRP10Q86W26 655 aa6.12□□□□□ -1.43
SCAF11-212ENST00000549162 SAMD3Q8N6K7 520 aa6.12□□□□□ -1.43
SCAF11-212ENST00000549162 USP21Q9UK80 565 aa6.12□□□□□ -1.43
SCAF11-212ENST00000549162 CCDC171Q6TFL3 1326 aa6.11□□□□□ -1.43
SCAF11-212ENST00000549162 STARD3NLO95772 234 aa6.11□□□□□ -1.43
SCAF11-212ENST00000549162 TGFB2P61812 414 aa6.11□□□□□ -1.43
SCAF11-212ENST00000549162 LINC00116Q8NCU8 138 aa6.11□□□□□ -1.43
SCAF11-212ENST00000549162 UBN2Q6ZU65 1347 aa6.11□□□□□ -1.43
SCAF11-212ENST00000549162 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.11□□□□□ -1.43
SCAF11-212ENST00000549162 ELOA2Q8IYF1 753 aaPredicted RBP6.11□□□□□ -1.43
SCAF11-212ENST00000549162 HIP1O00291 1037 aa6.11□□□□□ -1.43
SCAF11-212ENST00000549162 SEMA3FQ13275 785 aa6.11□□□□□ -1.43
SCAF11-212ENST00000549162 ITPK1Q13572 414 aa6.11□□□□□ -1.43
SCAF11-212ENST00000549162 RCSD1Q6JBY9 416 aa6.11□□□□□ -1.43
SCAF11-212ENST00000549162 RTF1Q92541 710 aaKnown RBP6.11□□□□□ -1.43
SCAF11-212ENST00000549162 ANO8Q9HCE9 1232 aaPredicted RBP6.11□□□□□ -1.43
SCAF11-212ENST00000549162 POLRMTO00411 1230 aaKnown RBP6.1□□□□□ -1.43
SCAF11-212ENST00000549162 TSPYL6Q8N831 410 aa6.1□□□□□ -1.43
SCAF11-212ENST00000549162 RWDD1Q9H446 243 aaPredicted RBP6.1□□□□□ -1.43
SCAF11-212ENST00000549162 TCP11L1Q9NUJ3 509 aa6.1□□□□□ -1.43
SCAF11-212ENST00000549162 BSDC1Q9NW68 430 aaPredicted RBP6.1□□□□□ -1.43
SCAF11-212ENST00000549162 SUPT16HQ9Y5B9 1047 aaKnown RBP6.1□□□□□ -1.43
SCAF11-212ENST00000549162 PDCD11Q14690 1871 aaKnown RBP6.1□□□□□ -1.43
SCAF11-212ENST00000549162 LOC102724428A0A0B4J2F2 783 aa6.1□□□□□ -1.43
SCAF11-212ENST00000549162 GRM8O00222 908 aa6.1□□□□□ -1.43
SCAF11-212ENST00000549162 PLA2G6O60733 806 aa6.1□□□□□ -1.43
SCAF11-212ENST00000549162 BRD1O95696 1058 aa6.1□□□□□ -1.43
SCAF11-212ENST00000549162 RLBP1P12271 317 aa6.1□□□□□ -1.43
SCAF11-212ENST00000549162 SIK1P57059 783 aa6.1□□□□□ -1.43
SCAF11-212ENST00000549162 PPP4CP60510 307 aa6.1□□□□□ -1.43
SCAF11-212ENST00000549162 KCNA1Q09470 495 aa6.1□□□□□ -1.43
SCAF11-212ENST00000549162 SOGA3Q5TF21 947 aa6.1□□□□□ -1.43
SCAF11-212ENST00000549162 TMEM174Q8WUU8 243 aa6.1□□□□□ -1.43
SCAF11-212ENST00000549162 EMILIN3Q9NT22 766 aa6.1□□□□□ -1.43
SCAF11-212ENST00000549162 PDE8AO60658 829 aa6.1□□□□□ -1.43
SCAF11-212ENST00000549162 PROCA1Q8NCQ7 364 aaPredicted RBP6.1□□□□□ -1.43
SCAF11-212ENST00000549162 NOL10Q9BSC4 688 aaKnown RBP6.1□□□□□ -1.43
SCAF11-212ENST00000549162 TSPYL4Q9UJ04 414 aa6.1□□□□□ -1.43
SCAF11-212ENST00000549162 CD2APQ9Y5K6 639 aa6.1□□□□□ -1.43
SCAF11-212ENST00000549162 PITPNM2Q9BZ72 1349 aa6.1□□□□□ -1.43
SCAF11-212ENST00000549162 IGSF5Q9NSI5 407 aa6.09□□□□□ -1.43
SCAF11-212ENST00000549162 TMOD3Q9NYL9 352 aa6.09□□□□□ -1.43
SCAF11-212ENST00000549162 MKRN1Q9UHC7 482 aaKnown RBP6.09□□□□□ -1.43
SCAF11-212ENST00000549162 GNAI2P04899 355 aa6.09□□□□□ -1.43
SCAF11-212ENST00000549162 UBE4AQ14139 1066 aa6.09□□□□□ -1.43
SCAF11-212ENST00000549162 FBXO33Q7Z6M2 555 aa6.09□□□□□ -1.43
SCAF11-212ENST00000549162 MS4A4AQ96JQ5 239 aa6.09□□□□□ -1.43
SCAF11-212ENST00000549162 NOB1Q9ULX3 412 aaKnown RBP6.09□□□□□ -1.43
SCAF11-212ENST00000549162 ZNF652Q9Y2D9 606 aa6.09□□□□□ -1.43
SCAF11-212ENST00000549162 TCRBV5S4A2TA0A5A2 114 aa6.09□□□□□ -1.43
SCAF11-212ENST00000549162 NUTM2FA1L443 756 aa6.09□□□□□ -1.43
SCAF11-212ENST00000549162 SBK1Q52WX2 424 aa6.09□□□□□ -1.43
SCAF11-212ENST00000549162 KRT27Q7Z3Y8 459 aa6.09□□□□□ -1.43
SCAF11-212ENST00000549162 LEMD3Q9Y2U8 911 aa6.09□□□□□ -1.43
SCAF11-212ENST00000549162 UBAP1LF5GYI3 381 aa6.08□□□□□ -1.44
SCAF11-212ENST00000549162 GNPATO15228 680 aa6.08□□□□□ -1.44
SCAF11-212ENST00000549162 IL15P40933 162 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms