RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 CACTINQ8WUQ7 758 aaKnown RBP16.67■□□□□ 0.26
RAPGEF3-218ENST00000548919 ATP5J2-PTCD1G3V325 749 aa16.66■□□□□ 0.26
RAPGEF3-218ENST00000548919 PTCD1O75127 700 aaKnown RBP16.66■□□□□ 0.26
RAPGEF3-218ENST00000548919 KRT32Q14532 448 aa16.66■□□□□ 0.26
RAPGEF3-218ENST00000548919 RFX5P48382 616 aaPredicted RBP16.66■□□□□ 0.26
RAPGEF3-218ENST00000548919 C11orf57Q6ZUT1 292 aaPredicted RBP16.66■□□□□ 0.26
RAPGEF3-218ENST00000548919 METTL22Q9BUU2 404 aaPredicted RBP16.66■□□□□ 0.26
RAPGEF3-218ENST00000548919 SIPA1L3O60292 1781 aaPredicted RBP16.66■□□□□ 0.26
RAPGEF3-218ENST00000548919 A0A0G2JLW4 131 aa16.66■□□□□ 0.26
RAPGEF3-218ENST00000548919 U2AF2P26368 475 aaKnown RBP eCLIP16.66■□□□□ 0.26
RAPGEF3-218ENST00000548919 ARID5BQ14865 1188 aa16.66■□□□□ 0.26
RAPGEF3-218ENST00000548919 COPRSQ9NQ92 184 aa16.66■□□□□ 0.26
RAPGEF3-218ENST00000548919 C5P01031 1676 aa16.65■□□□□ 0.26
RAPGEF3-218ENST00000548919 ZSCAN20P17040 1043 aaPredicted RBP16.65■□□□□ 0.26
RAPGEF3-218ENST00000548919 USP16Q9Y5T5 823 aa16.65■□□□□ 0.26
RAPGEF3-218ENST00000548919 FER1L4A9Z1Z3 1794 aa16.65■□□□□ 0.26
RAPGEF3-218ENST00000548919 CTIFO43310 598 aaKnown RBP16.65■□□□□ 0.26
RAPGEF3-218ENST00000548919 CCT2P78371 535 aaKnown RBP16.65■□□□□ 0.26
RAPGEF3-218ENST00000548919 MCMDC2Q4G0Z9 681 aa16.65■□□□□ 0.26
RAPGEF3-218ENST00000548919 ANKRD13DQ6ZTN6 518 aa16.65■□□□□ 0.26
RAPGEF3-218ENST00000548919 ERCC4Q92889 916 aaPredicted RBP16.65■□□□□ 0.26
RAPGEF3-218ENST00000548919 ZNF496Q96IT1 587 aaPredicted RBP16.65■□□□□ 0.26
RAPGEF3-218ENST00000548919 GOLPH3LQ9H4A5 285 aa16.65■□□□□ 0.26
RAPGEF3-218ENST00000548919 ZHX1Q9UKY1 873 aaPredicted RBP16.65■□□□□ 0.26
RAPGEF3-218ENST00000548919 OVOS2A0A0G2JMS6 1433 aa16.65■□□□□ 0.26
RAPGEF3-218ENST00000548919 MRC1P22897 1456 aa16.65■□□□□ 0.26
RAPGEF3-218ENST00000548919 ADD1P35611 737 aaKnown RBP16.64■□□□□ 0.25
RAPGEF3-218ENST00000548919 APOBRQ0VD83 1088 aa16.64■□□□□ 0.25
RAPGEF3-218ENST00000548919 NAA30Q147X3 362 aaPredicted RBP16.64■□□□□ 0.25
RAPGEF3-218ENST00000548919 ANKRD7Q92527 254 aa16.64■□□□□ 0.25
RAPGEF3-218ENST00000548919 NCOA5Q9HCD5 579 aaKnown RBP16.64■□□□□ 0.25
RAPGEF3-218ENST00000548919 NAP1L2Q9ULW6 460 aaPredicted RBP16.64■□□□□ 0.25
RAPGEF3-218ENST00000548919 U3KPZ7 1027 aaPredicted RBP16.64■□□□□ 0.25
RAPGEF3-218ENST00000548919 TNNT1P13805 278 aa16.64■□□□□ 0.25
RAPGEF3-218ENST00000548919 ZC3H6P61129 1189 aaKnown RBP16.64■□□□□ 0.25
RAPGEF3-218ENST00000548919 GUCY1B3Q02153 619 aa16.64■□□□□ 0.25
RAPGEF3-218ENST00000548919 FBXW7Q969H0 707 aa16.64■□□□□ 0.25
RAPGEF3-218ENST00000548919 CFAP45Q9UL16 551 aa16.64■□□□□ 0.25
RAPGEF3-218ENST00000548919 CTDNEP1O95476 244 aa16.63■□□□□ 0.25
RAPGEF3-218ENST00000548919 CCAR1Q8IX12 1150 aaKnown RBP16.63■□□□□ 0.25
RAPGEF3-218ENST00000548919 PHRF1Q9P1Y6 1649 aaKnown RBP16.63■□□□□ 0.25
RAPGEF3-218ENST00000548919 IQCB1Q15051 598 aa16.63■□□□□ 0.25
RAPGEF3-218ENST00000548919 CHST3Q7LGC8 479 aa16.63■□□□□ 0.25
RAPGEF3-218ENST00000548919 NSUN7Q8NE18 718 aaKnown RBP16.63■□□□□ 0.25
RAPGEF3-218ENST00000548919 ZSCAN16Q9H4T2 348 aaPredicted RBP16.63■□□□□ 0.25
RAPGEF3-218ENST00000548919 SLC52A2Q9HAB3 445 aa16.63■□□□□ 0.25
RAPGEF3-218ENST00000548919 RGPD5Q99666 1765 aa16.62■□□□□ 0.25
RAPGEF3-218ENST00000548919 NCBP1Q09161 790 aaKnown RBP16.62■□□□□ 0.25
RAPGEF3-218ENST00000548919 TPD52L1Q16890 204 aaPredicted RBP16.62■□□□□ 0.25
RAPGEF3-218ENST00000548919 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.62■□□□□ 0.25
RAPGEF3-218ENST00000548919 HAUS7Q99871 368 aa16.62■□□□□ 0.25
RAPGEF3-218ENST00000548919 GOLGA6L19H0YKK7 550 aa16.62■□□□□ 0.25
RAPGEF3-218ENST00000548919 SMARCC2Q8TAQ2 1214 aa16.62■□□□□ 0.25
RAPGEF3-218ENST00000548919 ZNF592Q92610 1267 aa16.62■□□□□ 0.25
RAPGEF3-218ENST00000548919 USP28Q96RU2 1077 aa16.62■□□□□ 0.25
RAPGEF3-218ENST00000548919 A0A087WZG4 1122 aa16.61■□□□□ 0.25
RAPGEF3-218ENST00000548919 PTPDC1A2A3K4 754 aa16.61■□□□□ 0.25
RAPGEF3-218ENST00000548919 KDM6AO15550 1401 aaPredicted RBP16.61■□□□□ 0.25
RAPGEF3-218ENST00000548919 USP27XA6NNY8 438 aa16.61■□□□□ 0.25
RAPGEF3-218ENST00000548919 GOLIM4O00461 696 aa16.61■□□□□ 0.25
RAPGEF3-218ENST00000548919 PFKFB2O60825 505 aa16.61■□□□□ 0.25
RAPGEF3-218ENST00000548919 LRP10Q7Z4F1 713 aa16.61■□□□□ 0.25
RAPGEF3-218ENST00000548919 NEUROD6Q96NK8 337 aa16.61■□□□□ 0.25
RAPGEF3-218ENST00000548919 LAMA4Q16363 1823 aa16.6■□□□□ 0.25
RAPGEF3-218ENST00000548919 DMTNQ08495 405 aa16.6■□□□□ 0.25
RAPGEF3-218ENST00000548919 NLRP2Q9NX02 1062 aa16.6■□□□□ 0.25
RAPGEF3-218ENST00000548919 SNW1Q13573 536 aaKnown RBP16.6■□□□□ 0.25
RAPGEF3-218ENST00000548919 SMTNL1A8MU46 457 aa16.6■□□□□ 0.25
RAPGEF3-218ENST00000548919 LMBR1LQ6UX01 489 aa16.6■□□□□ 0.25
RAPGEF3-218ENST00000548919 DHX32Q7L7V1 743 aaKnown RBP16.6■□□□□ 0.25
RAPGEF3-218ENST00000548919 LRRC8AQ8IWT6 810 aa16.6■□□□□ 0.25
RAPGEF3-218ENST00000548919 RAPGEF4Q8WZA2 1011 aa16.6■□□□□ 0.25
RAPGEF3-218ENST00000548919 TIMM10P62072 90 aa16.59■□□□□ 0.25
RAPGEF3-218ENST00000548919 KBTBD3Q8NAB2 608 aa16.59■□□□□ 0.25
RAPGEF3-218ENST00000548919 RCOR1Q9UKL0 485 aa16.59■□□□□ 0.25
RAPGEF3-218ENST00000548919 ERBB3P21860 1342 aa16.59■□□□□ 0.25
RAPGEF3-218ENST00000548919 STX1AQ16623 288 aa16.59■□□□□ 0.25
RAPGEF3-218ENST00000548919 RABL6Q3YEC7 729 aaPredicted RBP16.59■□□□□ 0.25
RAPGEF3-218ENST00000548919 FILIP1Q7Z7B0 1213 aa16.59■□□□□ 0.25
RAPGEF3-218ENST00000548919 AFDNP55196 1824 aaKnown RBP16.59■□□□□ 0.25
RAPGEF3-218ENST00000548919 ME1P48163 572 aa16.58■□□□□ 0.25
RAPGEF3-218ENST00000548919 ILDR1Q86SU0 546 aaPredicted RBP16.58■□□□□ 0.25
RAPGEF3-218ENST00000548919 BECN2A8MW95 431 aa16.58■□□□□ 0.24
RAPGEF3-218ENST00000548919 PHKG2P15735 406 aa16.58■□□□□ 0.24
RAPGEF3-218ENST00000548919 NAA16Q6N069 864 aaPredicted RBP16.58■□□□□ 0.24
RAPGEF3-218ENST00000548919 CCDC73Q6ZRK6 1079 aa16.58■□□□□ 0.24
RAPGEF3-218ENST00000548919 ANKLE2Q86XL3 938 aa16.58■□□□□ 0.24
RAPGEF3-218ENST00000548919 DHX40Q8IX18 779 aaKnown RBP16.58■□□□□ 0.24
RAPGEF3-218ENST00000548919 LLPHQ9BRT6 129 aaKnown RBP16.58■□□□□ 0.24
RAPGEF3-218ENST00000548919 MYH15Q9Y2K3 1946 aa16.58■□□□□ 0.24
RAPGEF3-218ENST00000548919 FSIP1Q8NA03 581 aa16.57■□□□□ 0.24
RAPGEF3-218ENST00000548919 CCDC112Q8NEF3 446 aa16.57■□□□□ 0.24
RAPGEF3-218ENST00000548919 SLIT3O75094 1523 aa16.57■□□□□ 0.24
RAPGEF3-218ENST00000548919 KINO60870 393 aaKnown RBP16.57■□□□□ 0.24
RAPGEF3-218ENST00000548919 IGSF3O75054 1194 aa16.57■□□□□ 0.24
RAPGEF3-218ENST00000548919 CDC25BP30305 580 aa16.57■□□□□ 0.24
RAPGEF3-218ENST00000548919 CEP135Q66GS9 1140 aa16.57■□□□□ 0.24
RAPGEF3-218ENST00000548919 GPHNQ9NQX3 736 aaPredicted RBP16.57■□□□□ 0.24
RAPGEF3-218ENST00000548919 PAG1Q9NWQ8 432 aa16.57■□□□□ 0.24
RAPGEF3-218ENST00000548919 TRMT1Q9NXH9 659 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms