RNA–Protein interactions for RNA: ENST00000548215.1

LINC02403-201, Transcript of long intergenic non-protein coding RNA 2403, humanhuman

TSL 3 BASIC

Gene LINC02403, Length 484 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02403-201ENST00000548215 TRMT112Q9UI30 125 aaKnown RBP12.56□□□□□ -0.4
LINC02403-201ENST00000548215 KIAA0100Q14667 2235 aaKnown RBP12.56□□□□□ -0.4
LINC02403-201ENST00000548215 TMC4Q7Z404 712 aa12.55□□□□□ -0.4
LINC02403-201ENST00000548215 NLRP10Q86W26 655 aa12.55□□□□□ -0.4
LINC02403-201ENST00000548215 CELF1Q92879 486 aaKnown RBP12.55□□□□□ -0.4
LINC02403-201ENST00000548215 CFAP53Q96M91 514 aa12.55□□□□□ -0.4
LINC02403-201ENST00000548215 NUDCQ9Y266 331 aa12.55□□□□□ -0.4
LINC02403-201ENST00000548215 TRIM17Q9Y577 477 aa12.55□□□□□ -0.4
LINC02403-201ENST00000548215 PAPPA2Q9BXP8 1791 aa12.55□□□□□ -0.4
LINC02403-201ENST00000548215 DLL1O00548 723 aa12.54□□□□□ -0.4
LINC02403-201ENST00000548215 EIF2S2P20042 333 aaKnown RBP12.54□□□□□ -0.4
LINC02403-201ENST00000548215 ZNF280AP59817 542 aaPredicted RBP12.54□□□□□ -0.4
LINC02403-201ENST00000548215 PROSER3Q2NL68 480 aa12.54□□□□□ -0.4
LINC02403-201ENST00000548215 INTS3Q68E01 1043 aaKnown RBP12.54□□□□□ -0.4
LINC02403-201ENST00000548215 PNISRQ8TF01 805 aaKnown RBP12.54□□□□□ -0.4
LINC02403-201ENST00000548215 EYA3Q99504 573 aa12.54□□□□□ -0.4
LINC02403-201ENST00000548215 SCN9AQ15858 1988 aa12.54□□□□□ -0.4
LINC02403-201ENST00000548215 TRIOBPQ9H2D6 2365 aa12.54□□□□□ -0.4
LINC02403-201ENST00000548215 CEP290O15078 2479 aa12.53□□□□□ -0.4
LINC02403-201ENST00000548215 COL6A3P12111 3177 aa12.53□□□□□ -0.4
LINC02403-201ENST00000548215 G3V3G9 751 aa12.53□□□□□ -0.4
LINC02403-201ENST00000548215 SREBF2Q12772 1141 aa12.53□□□□□ -0.4
LINC02403-201ENST00000548215 AIMP1Q12904 312 aaKnown RBP12.53□□□□□ -0.4
LINC02403-201ENST00000548215 PDIA6Q15084 440 aa12.53□□□□□ -0.4
LINC02403-201ENST00000548215 DCAF8Q5TAQ9 597 aa12.53□□□□□ -0.4
LINC02403-201ENST00000548215 OTOP1Q7RTM1 612 aa12.53□□□□□ -0.4
LINC02403-201ENST00000548215 LRP10Q7Z4F1 713 aa12.53□□□□□ -0.4
LINC02403-201ENST00000548215 TBC1D16Q8TBP0 767 aa12.53□□□□□ -0.4
LINC02403-201ENST00000548215 ZC3H12CQ9C0D7 883 aaKnown RBP12.53□□□□□ -0.4
LINC02403-201ENST00000548215 SH3TC1Q8TE82 1336 aa12.53□□□□□ -0.4
LINC02403-201ENST00000548215 LRRC37AA6NMS7 1700 aa12.52□□□□□ -0.41
LINC02403-201ENST00000548215 KDM3BQ7LBC6 1761 aa12.52□□□□□ -0.41
LINC02403-201ENST00000548215 MYOZ2Q9NPC6 264 aa12.52□□□□□ -0.41
LINC02403-201ENST00000548215 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.52□□□□□ -0.41
LINC02403-201ENST00000548215 RANBP2P49792 3224 aaKnown RBP12.51□□□□□ -0.41
LINC02403-201ENST00000548215 PTPN12Q05209 780 aaKnown RBP12.51□□□□□ -0.41
LINC02403-201ENST00000548215 TCIRG1Q13488 830 aa12.51□□□□□ -0.41
LINC02403-201ENST00000548215 PRKG1Q13976 671 aa12.51□□□□□ -0.41
LINC02403-201ENST00000548215 RSBN1LQ6PCB5 846 aaPredicted RBP12.51□□□□□ -0.41
LINC02403-201ENST00000548215 COPS6Q7L5N1 327 aa12.51□□□□□ -0.41
LINC02403-201ENST00000548215 NECTIN2Q92692 538 aa12.51□□□□□ -0.41
LINC02403-201ENST00000548215 CFHR5Q9BXR6 569 aa12.51□□□□□ -0.41
LINC02403-201ENST00000548215 ERBB4Q15303 1308 aa12.51□□□□□ -0.41
LINC02403-201ENST00000548215 USP17L8P0C7I0 530 aa12.5□□□□□ -0.41
LINC02403-201ENST00000548215 NBPF9Q3BBW0 867 aa12.5□□□□□ -0.41
LINC02403-201ENST00000548215 HSP90AB3PQ58FF7 597 aa12.5□□□□□ -0.41
LINC02403-201ENST00000548215 SLC17A8Q8NDX2 589 aa12.5□□□□□ -0.41
LINC02403-201ENST00000548215 AGBL3Q8NEM8 1001 aa12.5□□□□□ -0.41
LINC02403-201ENST00000548215 XAGE3Q8WTP9 111 aa12.5□□□□□ -0.41
LINC02403-201ENST00000548215 PITPNM2Q9BZ72 1349 aa12.5□□□□□ -0.41
LINC02403-201ENST00000548215 COL4A1P02462 1669 aa12.5□□□□□ -0.41
LINC02403-201ENST00000548215 DDX60Q8IY21 1712 aaKnown RBP12.49□□□□□ -0.41
LINC02403-201ENST00000548215 UFL1O94874 794 aa12.49□□□□□ -0.41
LINC02403-201ENST00000548215 RTL5Q5HYW3 569 aaPredicted RBP12.49□□□□□ -0.41
LINC02403-201ENST00000548215 FAM89AQ96GI7 184 aa12.49□□□□□ -0.41
LINC02403-201ENST00000548215 GMLQ99445 158 aa12.49□□□□□ -0.41
LINC02403-201ENST00000548215 PTPN22Q9Y2R2 807 aa12.49□□□□□ -0.41
LINC02403-201ENST00000548215 H0YGN5 161 aa12.48□□□□□ -0.41
LINC02403-201ENST00000548215 NF2P35240 595 aa12.48□□□□□ -0.41
LINC02403-201ENST00000548215 RPS8P62241 208 aaKnown RBP12.48□□□□□ -0.41
LINC02403-201ENST00000548215 SF3B3Q15393 1217 aaKnown RBP12.48□□□□□ -0.41
LINC02403-201ENST00000548215 SPRYD7Q5W111 196 aa12.48□□□□□ -0.41
LINC02403-201ENST00000548215 CD99L2Q8TCZ2 262 aa12.48□□□□□ -0.41
LINC02403-201ENST00000548215 ANKIB1Q9P2G1 1089 aa12.48□□□□□ -0.41
LINC02403-201ENST00000548215 FZD1Q9UP38 647 aa12.48□□□□□ -0.41
LINC02403-201ENST00000548215 DLG5Q8TDM6 1919 aa12.47□□□□□ -0.41
LINC02403-201ENST00000548215 ALDH1A1P00352 501 aa12.47□□□□□ -0.41
LINC02403-201ENST00000548215 ARMC9Q7Z3E5 817 aa12.47□□□□□ -0.41
LINC02403-201ENST00000548215 IFNL1Q8IU54 200 aa12.47□□□□□ -0.41
LINC02403-201ENST00000548215 ARMC5Q96C12 935 aa12.47□□□□□ -0.41
LINC02403-201ENST00000548215 OTUD5Q96G74 571 aa12.47□□□□□ -0.41
LINC02403-201ENST00000548215 TMEM106CQ9BVX2 250 aa12.47□□□□□ -0.41
LINC02403-201ENST00000548215 RBBP6Q7Z6E9 1792 aaKnown RBP12.46□□□□□ -0.41
LINC02403-201ENST00000548215 MXD3Q9BW11 206 aa12.46□□□□□ -0.41
LINC02403-201ENST00000548215 PCGF6Q9BYE7 350 aa12.46□□□□□ -0.41
LINC02403-201ENST00000548215 EFCC1Q9HA90 598 aa12.46□□□□□ -0.41
LINC02403-201ENST00000548215 PODXL2Q9NZ53 605 aa12.46□□□□□ -0.41
LINC02403-201ENST00000548215 TSPYL4Q9UJ04 414 aa12.46□□□□□ -0.41
LINC02403-201ENST00000548215 GGA1Q9UJY5 639 aa12.46□□□□□ -0.41
LINC02403-201ENST00000548215 ANGEL1Q9UNK9 670 aaKnown RBP12.46□□□□□ -0.41
LINC02403-201ENST00000548215 USP17L3A6NCW0 530 aa12.45□□□□□ -0.42
LINC02403-201ENST00000548215 USP17L4A6NCW7 530 aa12.45□□□□□ -0.42
LINC02403-201ENST00000548215 MANSC4A6NHS7 340 aaPredicted RBP12.45□□□□□ -0.42
LINC02403-201ENST00000548215 ATP5J2-PTCD1G3V325 749 aa12.45□□□□□ -0.42
LINC02403-201ENST00000548215 IGF2BP3O00425 579 aaKnown RBP eCLIP12.45□□□□□ -0.42
LINC02403-201ENST00000548215 MYCP01106 439 aaPredicted RBP12.45□□□□□ -0.42
LINC02403-201ENST00000548215 CAP1Q01518 475 aa12.45□□□□□ -0.42
LINC02403-201ENST00000548215 LDLRAD1Q5T700 205 aa12.45□□□□□ -0.42
LINC02403-201ENST00000548215 CHRDL2Q6WN34 429 aa12.45□□□□□ -0.42
LINC02403-201ENST00000548215 USP17L1Q7RTZ2 530 aa12.45□□□□□ -0.42
LINC02403-201ENST00000548215 SLC10A4Q96EP9 437 aa12.45□□□□□ -0.42
LINC02403-201ENST00000548215 ERO1AQ96HE7 468 aa12.45□□□□□ -0.42
LINC02403-201ENST00000548215 SEC31BQ9NQW1 1179 aa12.45□□□□□ -0.42
LINC02403-201ENST00000548215 CUL9Q8IWT3 2517 aa12.45□□□□□ -0.42
LINC02403-201ENST00000548215 WNT10BO00744 389 aa12.44□□□□□ -0.42
LINC02403-201ENST00000548215 SASH1O94885 1247 aa12.44□□□□□ -0.42
LINC02403-201ENST00000548215 NEFMP07197 916 aa12.44□□□□□ -0.42
LINC02403-201ENST00000548215 PPP2R1AP30153 589 aa12.44□□□□□ -0.42
LINC02403-201ENST00000548215 NFE2L2Q16236 605 aa12.44□□□□□ -0.42
LINC02403-201ENST00000548215 SLC4A8Q2Y0W8 1093 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms