RNA–Protein interactions for RNA: ENST00000548025.5

MARF1-205, Transcript of meiosis regulator and mRNA stability factor 1, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene MARF1, Length 5,891 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARF1-205	ENST00000548025	RAB3GAP1	Q15042	981 aa		12.36	□□□□□ -0.43
MARF1-205	ENST00000548025	ZFYVE28	Q9HCC9	887 aa		12.36	□□□□□ -0.43
MARF1-205	ENST00000548025	MSANTD4	Q8NCY6	345 aa		12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	MAP3K5	Q99683	1374 aa		12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	TBCA	O75347	108 aa	Known RBP	12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	FOSB	P53539	338 aa		12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	CCDC181	Q5TID7	509 aa		12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	TTC16	Q8NEE8	873 aa		12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	ESR2	Q92731	530 aa		12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	GOLGA1	Q92805	767 aa		12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	BLM	P54132	1417 aa	Predicted RBP	12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	RNMT	O43148	476 aa	Known RBP	12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	KDM4A	O75164	1064 aa		12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	CALM1	P0DP23	149 aa		12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	CALM2	P0DP24	149 aa		12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	CALM3	P0DP25	149 aa		12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	SASS6	Q6UVJ0	657 aa		12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	SYCP3	Q8IZU3	236 aa		12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	RBM19	Q9Y4C8	960 aa	Known RBP	12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	GNPTAB	Q3T906	1256 aa		12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	NOM1	Q5C9Z4	860 aa	Known RBP	12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	CCDC112	Q8NEF3	446 aa		12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.35	□□□□□ -0.43
MARF1-205	ENST00000548025	VPS72	Q15906	364 aa		12.34	□□□□□ -0.43
MARF1-205	ENST00000548025	NLRX1	Q86UT6	975 aa		12.34	□□□□□ -0.43
MARF1-205	ENST00000548025	ZNF354C	Q86Y25	554 aa		12.34	□□□□□ -0.43
MARF1-205	ENST00000548025	SMC1B	Q8NDV3	1235 aa		12.34	□□□□□ -0.43
MARF1-205	ENST00000548025	WDR17	Q8IZU2	1322 aa		12.34	□□□□□ -0.43
MARF1-205	ENST00000548025	STX8	Q9UNK0	236 aa		12.34	□□□□□ -0.43
MARF1-205	ENST00000548025	COMMD10	Q9Y6G5	202 aa		12.34	□□□□□ -0.43
MARF1-205	ENST00000548025	A2ML1	A8K2U0	1454 aa		12.34	□□□□□ -0.43
MARF1-205	ENST00000548025	ARHGEF37	A1IGU5	675 aa		12.34	□□□□□ -0.43
MARF1-205	ENST00000548025	CHURC1	Q8WUH1	139 aa		12.34	□□□□□ -0.43
MARF1-205	ENST00000548025	IFIT3	O14879	490 aa	Known RBP	12.34	□□□□□ -0.43
MARF1-205	ENST00000548025	STX6	O43752	255 aa		12.34	□□□□□ -0.43
MARF1-205	ENST00000548025	KCNA4	P22459	653 aa		12.34	□□□□□ -0.43
MARF1-205	ENST00000548025	PCF11	O94913	1555 aa	Known RBP	12.33	□□□□□ -0.43
MARF1-205	ENST00000548025	RRP36	Q96EU6	259 aa	Known RBP	12.33	□□□□□ -0.44
MARF1-205	ENST00000548025	MAGI3	Q5TCQ9	1506 aa		12.33	□□□□□ -0.44
MARF1-205	ENST00000548025	ABCA5	Q8WWZ7	1642 aa		12.33	□□□□□ -0.44
MARF1-205	ENST00000548025	CPLX3	Q8WVH0	158 aa		12.33	□□□□□ -0.44
MARF1-205	ENST00000548025	NACA2	Q9H009	215 aa		12.33	□□□□□ -0.44
MARF1-205	ENST00000548025	BABAM1	Q9NWV8	329 aa		12.33	□□□□□ -0.44
MARF1-205	ENST00000548025	SNX16	P57768	344 aa		12.33	□□□□□ -0.44
MARF1-205	ENST00000548025	SSRP1	Q08945	709 aa	Known RBP	12.33	□□□□□ -0.44
MARF1-205	ENST00000548025	KBTBD13	C9JR72	458 aa		12.33	□□□□□ -0.44
MARF1-205	ENST00000548025	AEBP1	Q8IUX7	1158 aa		12.33	□□□□□ -0.44
MARF1-205	ENST00000548025	CD2AP	Q9Y5K6	639 aa		12.33	□□□□□ -0.44
MARF1-205	ENST00000548025	PHACTR2	O75167	634 aa		12.32	□□□□□ -0.44
MARF1-205	ENST00000548025	TMPO	P42166	694 aa	Known RBP	12.32	□□□□□ -0.44
MARF1-205	ENST00000548025	GCNA	Q96QF7	691 aa		12.32	□□□□□ -0.44
MARF1-205	ENST00000548025	VAT1L	Q9HCJ6	419 aa		12.32	□□□□□ -0.44
MARF1-205	ENST00000548025	LOC102724428	A0A0B4J2F2	783 aa		12.32	□□□□□ -0.44
MARF1-205	ENST00000548025	SIK1	P57059	783 aa		12.32	□□□□□ -0.44
MARF1-205	ENST00000548025	CTTNBP2	Q8WZ74	1663 aa		12.32	□□□□□ -0.44
MARF1-205	ENST00000548025	SBNO1	A3KN83	1393 aa		12.32	□□□□□ -0.44
MARF1-205	ENST00000548025	ERLIN2	O94905	339 aa		12.32	□□□□□ -0.44
MARF1-205	ENST00000548025	BLOC1S2	Q6QNY1	142 aa		12.32	□□□□□ -0.44
MARF1-205	ENST00000548025	MCF2L2	Q86YR7	1114 aa		12.32	□□□□□ -0.44
MARF1-205	ENST00000548025	TRIM5	Q9C035	493 aa		12.32	□□□□□ -0.44
MARF1-205	ENST00000548025	TCP11L1	Q9NUJ3	509 aa		12.32	□□□□□ -0.44
MARF1-205	ENST00000548025	SEPT11	Q9NVA2	429 aa	Known RBP	12.32	□□□□□ -0.44
MARF1-205	ENST00000548025	GTF3C6	Q969F1	213 aa		12.32	□□□□□ -0.44
MARF1-205	ENST00000548025	SDF4	Q9BRK5	362 aa		12.32	□□□□□ -0.44
MARF1-205	ENST00000548025	FTO	Q9C0B1	505 aa	Known RBP eCLIP	12.32	□□□□□ -0.44	3e-6	■■■■■ 27.5
MARF1-205	ENST00000548025	KCNQ2	O43526	872 aa		12.31	□□□□□ -0.44
MARF1-205	ENST00000548025	CALML3	P27482	149 aa		12.31	□□□□□ -0.44
MARF1-205	ENST00000548025	DPF3	Q92784	378 aa		12.31	□□□□□ -0.44
MARF1-205	ENST00000548025	ZSCAN31	Q96LW9	406 aa	Predicted RBP	12.31	□□□□□ -0.44
MARF1-205	ENST00000548025	MAP7D2	Q96T17	732 aa		12.31	□□□□□ -0.44
MARF1-205	ENST00000548025	SLC4A4	Q9Y6R1	1079 aa		12.31	□□□□□ -0.44
MARF1-205	ENST00000548025	NBPF15	Q8N660	670 aa		12.31	□□□□□ -0.44
MARF1-205	ENST00000548025	COPB2	P35606	906 aa		12.31	□□□□□ -0.44
MARF1-205	ENST00000548025	ALDH1A1	P00352	501 aa		12.31	□□□□□ -0.44
MARF1-205	ENST00000548025	KSR2	Q6VAB6	950 aa		12.31	□□□□□ -0.44
MARF1-205	ENST00000548025	DHX8	Q14562	1220 aa	Known RBP	12.31	□□□□□ -0.44
MARF1-205	ENST00000548025	LMBR1L	Q6UX01	489 aa		12.31	□□□□□ -0.44
MARF1-205	ENST00000548025	NCAPG2	Q86XI2	1143 aa		12.31	□□□□□ -0.44
MARF1-205	ENST00000548025	MMP10	P09238	476 aa		12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	SLC39A6	Q13433	755 aa		12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	ALDH1L2	Q3SY69	923 aa		12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	VPS36	Q86VN1	386 aa		12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	PLBD2	Q8NHP8	589 aa		12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	UBA5	Q9GZZ9	404 aa		12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	NOB1	Q9ULX3	412 aa	Known RBP	12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	MICAL1	Q8TDZ2	1067 aa		12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	MTFR1L	Q9H019	292 aa		12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	MCM9	Q9NXL9	1143 aa		12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	ADD3	Q9UEY8	706 aa	Known RBP	12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	ACTN1	P12814	892 aa		12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	ZNF157	P51786	506 aa	Predicted RBP	12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	GTF3C2	Q8WUA4	911 aa	Predicted RBP	12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	ZFYVE9	O95405	1425 aa		12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	PTPDC1	A2A3K4	754 aa		12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	KCNJ6	P48051	423 aa		12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	CCDC191	Q8NCU4	936 aa		12.3	□□□□□ -0.44
MARF1-205	ENST00000548025	MIS18A	Q9NYP9	233 aa		12.29	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms