RNA–Protein interactions for RNA: ENST00000547905.5

RACGAP1-209, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-209ENST00000547905 SP3Q02447 781 aa12.24□□□□□ -0.45
RACGAP1-209ENST00000547905 WASHC4Q2M389 1173 aa12.24□□□□□ -0.45
RACGAP1-209ENST00000547905 SLC9C1Q4G0N8 1177 aa12.24□□□□□ -0.45
RACGAP1-209ENST00000547905 NBPF10Q6P3W6 841 aaKnown RBP12.24□□□□□ -0.45
RACGAP1-209ENST00000547905 NUTM1Q86Y26 1132 aa12.24□□□□□ -0.45
RACGAP1-209ENST00000547905 ERBB4Q15303 1308 aa12.24□□□□□ -0.45
RACGAP1-209ENST00000547905 UBE2Q2LH0YL09 131 aa12.23□□□□□ -0.45
RACGAP1-209ENST00000547905 ANGEL2Q5VTE6 544 aaKnown RBP12.23□□□□□ -0.45
RACGAP1-209ENST00000547905 DLK2Q6UY11 383 aa12.23□□□□□ -0.45
RACGAP1-209ENST00000547905 DPF3Q92784 378 aa12.23□□□□□ -0.45
RACGAP1-209ENST00000547905 PRKRIP1Q9H875 184 aaPredicted RBP12.23□□□□□ -0.45
RACGAP1-209ENST00000547905 MAP3K11Q16584 847 aa12.23□□□□□ -0.45
RACGAP1-209ENST00000547905 DDX46Q7L014 1031 aaKnown RBP12.23□□□□□ -0.45
RACGAP1-209ENST00000547905 R3HDMLQ9H3Y0 253 aa12.23□□□□□ -0.45
RACGAP1-209ENST00000547905 TESPA1A2RU30 521 aaPredicted RBP12.22□□□□□ -0.45
RACGAP1-209ENST00000547905 SUSD4Q5VX71 490 aa12.22□□□□□ -0.45
RACGAP1-209ENST00000547905 UBE2Q1Q7Z7E8 422 aa12.22□□□□□ -0.45
RACGAP1-209ENST00000547905 TSHZ2Q9NRE2 1034 aa12.22□□□□□ -0.45
RACGAP1-209ENST00000547905 NUP98P52948 1817 aa12.22□□□□□ -0.45
RACGAP1-209ENST00000547905 RBM26Q5T8P6 1007 aaKnown RBP12.22□□□□□ -0.45
RACGAP1-209ENST00000547905 CD99L2Q8TCZ2 262 aa12.22□□□□□ -0.45
RACGAP1-209ENST00000547905 UTP14AQ9BVJ6 771 aaKnown RBP12.22□□□□□ -0.45
RACGAP1-209ENST00000547905 DUOX1Q9NRD9 1551 aa12.21□□□□□ -0.45
RACGAP1-209ENST00000547905 LAMB4A4D0S4 1761 aa12.21□□□□□ -0.45
RACGAP1-209ENST00000547905 EGFRP00533 1210 aa12.21□□□□□ -0.45
RACGAP1-209ENST00000547905 LRIT3Q3SXY7 679 aa12.21□□□□□ -0.45
RACGAP1-209ENST00000547905 FAM109BQ6ICB4 259 aaPredicted RBP12.21□□□□□ -0.45
RACGAP1-209ENST00000547905 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.21□□□□□ -0.45
RACGAP1-209ENST00000547905 SYMPKQ92797 1274 aaKnown RBP12.21□□□□□ -0.45
RACGAP1-209ENST00000547905 HTATSF1O43719 755 aaKnown RBP12.2□□□□□ -0.46
RACGAP1-209ENST00000547905 ECE2O60344 883 aa12.2□□□□□ -0.46
RACGAP1-209ENST00000547905 TTLL12Q14166 644 aaPredicted RBP12.2□□□□□ -0.46
RACGAP1-209ENST00000547905 RSBN1LQ6PCB5 846 aaPredicted RBP12.2□□□□□ -0.46
RACGAP1-209ENST00000547905 GIGYF2Q6Y7W6 1299 aaKnown RBP12.2□□□□□ -0.46
RACGAP1-209ENST00000547905 RTL9Q8NET4 1388 aa12.2□□□□□ -0.46
RACGAP1-209ENST00000547905 UBN2Q6ZU65 1347 aa12.2□□□□□ -0.46
RACGAP1-209ENST00000547905 TRIOBPQ9H2D6 2365 aa12.19□□□□□ -0.46
RACGAP1-209ENST00000547905 APOBEC3FQ8IUX4 373 aaKnown RBP12.19□□□□□ -0.46
RACGAP1-209ENST00000547905 DIAPH1O60610 1272 aaKnown RBP12.19□□□□□ -0.46
RACGAP1-209ENST00000547905 USP17L8P0C7I0 530 aa12.19□□□□□ -0.46
RACGAP1-209ENST00000547905 PTPN12Q05209 780 aaKnown RBP12.19□□□□□ -0.46
RACGAP1-209ENST00000547905 HSP90AB3PQ58FF7 597 aa12.19□□□□□ -0.46
RACGAP1-209ENST00000547905 SLC10A4Q96EP9 437 aa12.19□□□□□ -0.46
RACGAP1-209ENST00000547905 GMLQ99445 158 aa12.19□□□□□ -0.46
RACGAP1-209ENST00000547905 ZCCHC17Q9NP64 241 aaKnown RBP12.19□□□□□ -0.46
RACGAP1-209ENST00000547905 MYOZ2Q9NPC6 264 aa12.19□□□□□ -0.46
RACGAP1-209ENST00000547905 MTMR10Q9NXD2 777 aa12.19□□□□□ -0.46
RACGAP1-209ENST00000547905 PPP2R3BQ9Y5P8 575 aa12.19□□□□□ -0.46
RACGAP1-209ENST00000547905 TCERG1O14776 1098 aaKnown RBP12.18□□□□□ -0.46
RACGAP1-209ENST00000547905 WDHD1O75717 1129 aaPredicted RBP12.18□□□□□ -0.46
RACGAP1-209ENST00000547905 NEFLP07196 543 aa12.18□□□□□ -0.46
RACGAP1-209ENST00000547905 CCDC184Q52MB2 194 aa12.18□□□□□ -0.46
RACGAP1-209ENST00000547905 DEFB123Q8N688 67 aa12.18□□□□□ -0.46
RACGAP1-209ENST00000547905 HNRNPUQ00839 825 aaKnown RBP eCLIP12.18□□□□□ -0.46
RACGAP1-209ENST00000547905 PNISRQ8TF01 805 aaKnown RBP12.18□□□□□ -0.46
RACGAP1-209ENST00000547905 WNK4Q96J92 1243 aa12.18□□□□□ -0.46
RACGAP1-209ENST00000547905 PODXL2Q9NZ53 605 aa12.18□□□□□ -0.46
RACGAP1-209ENST00000547905 ARIH1Q9Y4X5 557 aaPredicted RBP12.18□□□□□ -0.46
RACGAP1-209ENST00000547905 KIAA0100Q14667 2235 aaKnown RBP12.17□□□□□ -0.46
RACGAP1-209ENST00000547905 SOX1O00570 391 aaPredicted RBP12.17□□□□□ -0.46
RACGAP1-209ENST00000547905 HMOX1P09601 288 aa12.17□□□□□ -0.46
RACGAP1-209ENST00000547905 PLA2G5P39877 138 aa12.17□□□□□ -0.46
RACGAP1-209ENST00000547905 PTCH2Q9Y6C5 1203 aa12.17□□□□□ -0.46
RACGAP1-209ENST00000547905 MYO3BQ8WXR4 1341 aa12.17□□□□□ -0.46
RACGAP1-209ENST00000547905 GJB1P08034 283 aa12.16□□□□□ -0.46
RACGAP1-209ENST00000547905 GJA8P48165 433 aa12.16□□□□□ -0.46
RACGAP1-209ENST00000547905 CRHR2Q13324 411 aa12.16□□□□□ -0.46
RACGAP1-209ENST00000547905 KIF22Q14807 665 aa12.16□□□□□ -0.46
RACGAP1-209ENST00000547905 C3orf67Q6ZVT6 689 aa12.16□□□□□ -0.46
RACGAP1-209ENST00000547905 DBNDD1Q9H9R9 158 aa12.16□□□□□ -0.46
RACGAP1-209ENST00000547905 PSME4Q14997 1843 aa12.16□□□□□ -0.46
RACGAP1-209ENST00000547905 KCNQ3O43525 872 aa12.16□□□□□ -0.46
RACGAP1-209ENST00000547905 HELBQ8NG08 1087 aaPredicted RBP12.16□□□□□ -0.46
RACGAP1-209ENST00000547905 ZC3H12CQ9C0D7 883 aaKnown RBP12.16□□□□□ -0.46
RACGAP1-209ENST00000547905 ZFYVE28Q9HCC9 887 aa12.16□□□□□ -0.46
RACGAP1-209ENST00000547905 IGF2BP3O00425 579 aaKnown RBP eCLIP12.15□□□□□ -0.46
RACGAP1-209ENST00000547905 MOB2Q70IA6 237 aa12.15□□□□□ -0.46
RACGAP1-209ENST00000547905 SHISA4Q96DD7 197 aa12.15□□□□□ -0.47
RACGAP1-209ENST00000547905 ASTN2O75129 1339 aaPredicted RBP12.14□□□□□ -0.47
RACGAP1-209ENST00000547905 RPTORQ8N122 1335 aa12.14□□□□□ -0.47
RACGAP1-209ENST00000547905 PIP4K2AP48426 406 aaPredicted RBP12.14□□□□□ -0.47
RACGAP1-209ENST00000547905 LRCH3Q96II8 777 aa12.14□□□□□ -0.47
RACGAP1-209ENST00000547905 ZBED9Q6R2W3 1325 aa12.14□□□□□ -0.47
RACGAP1-209ENST00000547905 FAM205AQ6ZU69 1335 aa12.14□□□□□ -0.47
RACGAP1-209ENST00000547905 SSC5DA1L4H1 1573 aa12.14□□□□□ -0.47
RACGAP1-209ENST00000547905 CUL9Q8IWT3 2517 aa12.14□□□□□ -0.47
RACGAP1-209ENST00000547905 G3V3G9 751 aa12.13□□□□□ -0.47
RACGAP1-209ENST00000547905 C6orf229H3BNL8 230 aa12.13□□□□□ -0.47
RACGAP1-209ENST00000547905 COL9A1P20849 921 aa12.13□□□□□ -0.47
RACGAP1-209ENST00000547905 HOXD10P28358 340 aa12.13□□□□□ -0.47
RACGAP1-209ENST00000547905 SF3B3Q15393 1217 aaKnown RBP12.13□□□□□ -0.47
RACGAP1-209ENST00000547905 DCAF8Q5TAQ9 597 aa12.13□□□□□ -0.47
RACGAP1-209ENST00000547905 PODNQ7Z5L7 613 aa12.13□□□□□ -0.47
RACGAP1-209ENST00000547905 PPP1R12BO60237 982 aaPredicted RBP12.13□□□□□ -0.47
RACGAP1-209ENST00000547905 GPTP24298 496 aa12.13□□□□□ -0.47
RACGAP1-209ENST00000547905 FAM122AQ96E09 287 aa12.13□□□□□ -0.47
RACGAP1-209ENST00000547905 GDF15Q99988 308 aa12.13□□□□□ -0.47
RACGAP1-209ENST00000547905 NSFL1CQ9UNZ2 370 aaKnown RBP12.13□□□□□ -0.47
RACGAP1-209ENST00000547905 LAMB2P55268 1798 aa12.13□□□□□ -0.47
RACGAP1-209ENST00000547905 USP17L3A6NCW0 530 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms