RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 STX6O43752 255 aa10.39□□□□□ -0.75
NECAP1-207ENST00000544891 BICDL1Q6ZP65 573 aa10.39□□□□□ -0.75
NECAP1-207ENST00000544891 CCDC150Q8NCX0 1101 aa10.39□□□□□ -0.75
NECAP1-207ENST00000544891 MPHOSPH6Q99547 160 aaKnown RBP10.39□□□□□ -0.75
NECAP1-207ENST00000544891 CRNKL1Q9BZJ0 848 aaKnown RBP10.39□□□□□ -0.75
NECAP1-207ENST00000544891 CCDC8Q9H0W5 538 aaPredicted RBP10.39□□□□□ -0.75
NECAP1-207ENST00000544891 CABP5Q9NP86 173 aa10.39□□□□□ -0.75
NECAP1-207ENST00000544891 GOLIM4O00461 696 aa10.39□□□□□ -0.75
NECAP1-207ENST00000544891 TMCO3Q6UWJ1 677 aa10.39□□□□□ -0.75
NECAP1-207ENST00000544891 RHPN1Q8TCX5 695 aa10.39□□□□□ -0.75
NECAP1-207ENST00000544891 NAA15Q9BXJ9 866 aaKnown RBP10.39□□□□□ -0.75
NECAP1-207ENST00000544891 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.39□□□□□ -0.75
NECAP1-207ENST00000544891 SYCE3A1L190 88 aa10.39□□□□□ -0.75
NECAP1-207ENST00000544891 MFSD6Q6ZSS7 791 aa10.39□□□□□ -0.75
NECAP1-207ENST00000544891 TBC1D32Q96NH3 1257 aa10.39□□□□□ -0.75
NECAP1-207ENST00000544891 USP16Q9Y5T5 823 aa10.39□□□□□ -0.75
NECAP1-207ENST00000544891 PI4KAP2A4QPH2 592 aa10.39□□□□□ -0.75
NECAP1-207ENST00000544891 CCDC172P0C7W6 258 aa10.39□□□□□ -0.75
NECAP1-207ENST00000544891 FERMT3Q86UX7 667 aa10.39□□□□□ -0.75
NECAP1-207ENST00000544891 PI4KAP1Q8N8J0 262 aa10.39□□□□□ -0.75
NECAP1-207ENST00000544891 EHBP1Q8NDI1 1231 aa10.39□□□□□ -0.75
NECAP1-207ENST00000544891 TTC41PQ6P2S7 1318 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 NUCB1Q02818 461 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 CCDC102BQ68D86 513 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 LINS1Q8NG48 757 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 FLT4P35916 1363 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 F6X3S4 739 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 UBA7P41226 1012 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 KLHL40Q2TBA0 621 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 KSR2Q6VAB6 950 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 DDX12PQ92771 950 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 ORC3Q9UBD5 711 aaPredicted RBP10.38□□□□□ -0.75
NECAP1-207ENST00000544891 CCDC96Q2M329 555 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 TBC1D9Q6ZT07 1266 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 TBC1D2Q9BYX2 928 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 SMARCA5O60264 1052 aaPredicted RBP10.38□□□□□ -0.75
NECAP1-207ENST00000544891 RBM25P49756 843 aaKnown RBP10.38□□□□□ -0.75
NECAP1-207ENST00000544891 TMEM67Q5HYA8 995 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 USP37Q86T82 979 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 FSIP1Q8NA03 581 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 NGLY1Q96IV0 654 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 PSMD1Q99460 953 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 TAOK3Q9H2K8 898 aa10.38□□□□□ -0.75
NECAP1-207ENST00000544891 RAD50Q92878 1312 aa10.37□□□□□ -0.75
NECAP1-207ENST00000544891 RRP9O43818 475 aaKnown RBP10.37□□□□□ -0.75
NECAP1-207ENST00000544891 GNAT2P19087 354 aa10.37□□□□□ -0.75
NECAP1-207ENST00000544891 ATP8B2P98198 1209 aa10.37□□□□□ -0.75
NECAP1-207ENST00000544891 ERMNQ8TAM6 284 aa10.37□□□□□ -0.75
NECAP1-207ENST00000544891 KCNG4Q8TDN1 519 aa10.37□□□□□ -0.75
NECAP1-207ENST00000544891 KAT14Q9H8E8 782 aa10.37□□□□□ -0.75
NECAP1-207ENST00000544891 IFI16Q16666 785 aaKnown RBP10.37□□□□□ -0.75
NECAP1-207ENST00000544891 SEPT11Q9NVA2 429 aaKnown RBP10.37□□□□□ -0.75
NECAP1-207ENST00000544891 TUBB4BP68371 445 aa10.37□□□□□ -0.75
NECAP1-207ENST00000544891 TAF3Q5VWG9 929 aa10.37□□□□□ -0.75
NECAP1-207ENST00000544891 UBE3BQ7Z3V4 1068 aa10.37□□□□□ -0.75
NECAP1-207ENST00000544891 CCDC91Q7Z6B0 441 aa10.37□□□□□ -0.75
NECAP1-207ENST00000544891 ESR2Q92731 530 aa10.37□□□□□ -0.75
NECAP1-207ENST00000544891 CCDC85AQ96PX6 553 aaPredicted RBP10.37□□□□□ -0.75
NECAP1-207ENST00000544891 CALM1P0DP23 149 aa10.36□□□□□ -0.75
NECAP1-207ENST00000544891 CALM2P0DP24 149 aa10.36□□□□□ -0.75
NECAP1-207ENST00000544891 CALM3P0DP25 149 aa10.36□□□□□ -0.75
NECAP1-207ENST00000544891 METAP2P50579 478 aaKnown RBP eCLIP10.36□□□□□ -0.75
NECAP1-207ENST00000544891 ZCRB1Q8TBF4 217 aaKnown RBP10.36□□□□□ -0.75
NECAP1-207ENST00000544891 SNX21Q969T3 373 aa10.36□□□□□ -0.75
NECAP1-207ENST00000544891 NEBLO76041 1014 aa10.36□□□□□ -0.75
NECAP1-207ENST00000544891 MATR3P43243 847 aaKnown RBP eCLIP10.36□□□□□ -0.756e-7■■■■□ 26.2
NECAP1-207ENST00000544891 ALS2CR12Q96Q35 445 aa10.36□□□□□ -0.75
NECAP1-207ENST00000544891 FAM107BQ9H098 131 aa10.36□□□□□ -0.75
NECAP1-207ENST00000544891 PPP1R1BQ9UD71 204 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-207ENST00000544891 HOXB7P09629 217 aa10.36□□□□□ -0.75
NECAP1-207ENST00000544891 PLCG2P16885 1265 aa10.36□□□□□ -0.75
NECAP1-207ENST00000544891 STK11IPQ8N1F8 1099 aa10.36□□□□□ -0.75
NECAP1-207ENST00000544891 UQCRHLA0A096LP55 91 aa10.36□□□□□ -0.75
NECAP1-207ENST00000544891 TSPY2A6NKD2 308 aa10.36□□□□□ -0.75
NECAP1-207ENST00000544891 GRM8O00222 908 aa10.36□□□□□ -0.75
NECAP1-207ENST00000544891 UQCRHP07919 91 aa10.36□□□□□ -0.75
NECAP1-207ENST00000544891 KIF4BQ2VIQ3 1234 aa10.36□□□□□ -0.75
NECAP1-207ENST00000544891 CTAGE1Q96RT6 745 aa10.36□□□□□ -0.75
NECAP1-207ENST00000544891 ST5P78524 1137 aa10.35□□□□□ -0.75
NECAP1-207ENST00000544891 ZBTB3Q9H5J0 574 aa10.35□□□□□ -0.75
NECAP1-207ENST00000544891 INCENPQ9NQS7 918 aa10.35□□□□□ -0.75
NECAP1-207ENST00000544891 PLEKHG3A1L390 1219 aa10.35□□□□□ -0.75
NECAP1-207ENST00000544891 PIP4K2BP78356 416 aa10.35□□□□□ -0.75
NECAP1-207ENST00000544891 ATL3Q6DD88 541 aa10.35□□□□□ -0.75
NECAP1-207ENST00000544891 TNPO1Q92973 898 aaKnown RBP10.35□□□□□ -0.75
NECAP1-207ENST00000544891 PLVAPQ9BX97 442 aa10.35□□□□□ -0.75
NECAP1-207ENST00000544891 NYXQ9GZU5 481 aa10.35□□□□□ -0.75
NECAP1-207ENST00000544891 BRPF3Q9ULD4 1205 aa10.35□□□□□ -0.75
NECAP1-207ENST00000544891 NWD1Q149M9 1564 aa10.35□□□□□ -0.75
NECAP1-207ENST00000544891 KIF24Q5T7B8 1368 aa10.35□□□□□ -0.75
NECAP1-207ENST00000544891 USHBP1Q8N6Y0 703 aa10.35□□□□□ -0.75
NECAP1-207ENST00000544891 CLIP2Q9UDT6 1046 aa10.35□□□□□ -0.75
NECAP1-207ENST00000544891 C6orf229H3BNL8 230 aa10.35□□□□□ -0.75
NECAP1-207ENST00000544891 CALML3P27482 149 aa10.35□□□□□ -0.75
NECAP1-207ENST00000544891 ENOX2Q16206 610 aaKnown RBP10.35□□□□□ -0.75
NECAP1-207ENST00000544891 ATP2B3Q16720 1220 aa10.35□□□□□ -0.75
NECAP1-207ENST00000544891 CDCA7Q9BWT1 371 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-207ENST00000544891 ROBO2Q9HCK4 1378 aa10.35□□□□□ -0.75
NECAP1-207ENST00000544891 B4DLN1 442 aa10.34□□□□□ -0.75
NECAP1-207ENST00000544891 GJB2P29033 226 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms