RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 WDR90Q96KV7 1748 aa16.7■□□□□ 0.26
CIT-214ENST00000544588 ARFGEF2Q9Y6D5 1785 aa16.69■□□□□ 0.26
CIT-214ENST00000544588 H7C1D1 291 aa16.69■□□□□ 0.26
CIT-214ENST00000544588 ITGA6P23229 1130 aa16.69■□□□□ 0.26
CIT-214ENST00000544588 ATP2B4P23634 1241 aa16.69■□□□□ 0.26
CIT-214ENST00000544588 FAM161AQ3B820 660 aa16.69■□□□□ 0.26
CIT-214ENST00000544588 USP50Q70EL3 339 aaPredicted RBP16.69■□□□□ 0.26
CIT-214ENST00000544588 PLA2G12BQ9BX93 195 aa16.69■□□□□ 0.26
CIT-214ENST00000544588 BSDC1Q9NW68 430 aaPredicted RBP16.69■□□□□ 0.26
CIT-214ENST00000544588 CNOT7Q9UIV1 285 aaKnown RBP16.69■□□□□ 0.26
CIT-214ENST00000544588 MINPP1Q9UNW1 487 aa16.69■□□□□ 0.26
CIT-214ENST00000544588 XDHP47989 1333 aa16.69■□□□□ 0.26
CIT-214ENST00000544588 PSMD14O00487 310 aa16.68■□□□□ 0.26
CIT-214ENST00000544588 CASP7P55210 303 aa16.68■□□□□ 0.26
CIT-214ENST00000544588 SRCIN1Q9C0H9 1055 aa16.68■□□□□ 0.26
CIT-214ENST00000544588 KCNQ5Q9NR82 932 aa16.68■□□□□ 0.26
CIT-214ENST00000544588 ANKRD18BA2A2Z9 1011 aa16.67■□□□□ 0.26
CIT-214ENST00000544588 ITGBL1O95965 494 aaPredicted RBP16.67■□□□□ 0.26
CIT-214ENST00000544588 DIEXFQ68CQ4 756 aaKnown RBP16.67■□□□□ 0.26
CIT-214ENST00000544588 MRPL50Q8N5N7 158 aaKnown RBP16.67■□□□□ 0.26
CIT-214ENST00000544588 CREBZFQ9NS37 354 aa16.67■□□□□ 0.26
CIT-214ENST00000544588 MKRN1Q9UHC7 482 aaKnown RBP16.67■□□□□ 0.26
CIT-214ENST00000544588 ANKRD36CQ5JPF3 1778 aa16.66■□□□□ 0.26
CIT-214ENST00000544588 GRM8O00222 908 aa16.66■□□□□ 0.26
CIT-214ENST00000544588 ALDH1L1O75891 902 aa16.66■□□□□ 0.26
CIT-214ENST00000544588 CSF1RP07333 972 aa16.66■□□□□ 0.26
CIT-214ENST00000544588 IFIT5Q13325 482 aaKnown RBP16.66■□□□□ 0.26
CIT-214ENST00000544588 CCDC88AQ3V6T2 1871 aa16.66■□□□□ 0.26
CIT-214ENST00000544588 TAF7LQ5H9L4 462 aa16.66■□□□□ 0.26
CIT-214ENST00000544588 RBM26Q5T8P6 1007 aaKnown RBP16.66■□□□□ 0.26
CIT-214ENST00000544588 MICALL2Q8IY33 904 aa16.66■□□□□ 0.26
CIT-214ENST00000544588 SSH1Q8WYL5 1049 aa16.66■□□□□ 0.26
CIT-214ENST00000544588 PASKQ96RG2 1323 aa16.66■□□□□ 0.26
CIT-214ENST00000544588 SHTN1A0MZ66 631 aa16.65■□□□□ 0.26
CIT-214ENST00000544588 TMEM88BA6NKF7 163 aa16.65■□□□□ 0.26
CIT-214ENST00000544588 KCNJ4P48050 445 aa16.65■□□□□ 0.26
CIT-214ENST00000544588 LMBR1LQ6UX01 489 aa16.65■□□□□ 0.26
CIT-214ENST00000544588 WTIPA6NIX2 430 aaPredicted RBP16.64■□□□□ 0.25
CIT-214ENST00000544588 CCT4P50991 539 aaKnown RBP16.64■□□□□ 0.25
CIT-214ENST00000544588 CCDC57Q2TAC2 916 aa16.64■□□□□ 0.25
CIT-214ENST00000544588 MIER1Q8N108 512 aa16.64■□□□□ 0.25
CIT-214ENST00000544588 FBXW7Q969H0 707 aa16.64■□□□□ 0.25
CIT-214ENST00000544588 ANKRD2Q9GZV1 360 aa16.64■□□□□ 0.25
CIT-214ENST00000544588 SMC4Q9NTJ3 1288 aa16.64■□□□□ 0.25
CIT-214ENST00000544588 RTL9Q8NET4 1388 aa16.64■□□□□ 0.25
CIT-214ENST00000544588 PCNTO95613 3336 aa16.63■□□□□ 0.25
CIT-214ENST00000544588 FOXO4P98177 505 aa16.63■□□□□ 0.25
CIT-214ENST00000544588 TBC1D10BQ4KMP7 808 aaPredicted RBP16.63■□□□□ 0.25
CIT-214ENST00000544588 EPHA10Q5JZY3 1008 aa16.63■□□□□ 0.25
CIT-214ENST00000544588 SAMD7Q7Z3H4 446 aa16.63■□□□□ 0.25
CIT-214ENST00000544588 TRPM4Q8TD43 1214 aa16.63■□□□□ 0.25
CIT-214ENST00000544588 DPF2Q92785 391 aa16.63■□□□□ 0.25
CIT-214ENST00000544588 ABT1Q9ULW3 272 aaKnown RBP16.63■□□□□ 0.25
CIT-214ENST00000544588 LEMD3Q9Y2U8 911 aa16.63■□□□□ 0.25
CIT-214ENST00000544588 TRAF5O00463 557 aa16.62■□□□□ 0.25
CIT-214ENST00000544588 PLIN1O60240 522 aa16.62■□□□□ 0.25
CIT-214ENST00000544588 RPS12P25398 132 aaKnown RBP16.62■□□□□ 0.25
CIT-214ENST00000544588 FMR1Q06787 632 aaKnown RBP eCLIP16.62■□□□□ 0.25
CIT-214ENST00000544588 CHRNDQ07001 517 aa16.62■□□□□ 0.25
CIT-214ENST00000544588 PTPRCP08575 1304 aa16.62■□□□□ 0.25
CIT-214ENST00000544588 DICER1Q9UPY3 1922 aaKnown RBP16.62■□□□□ 0.25
CIT-214ENST00000544588 VIL1P09327 827 aaKnown RBP16.61■□□□□ 0.25
CIT-214ENST00000544588 HIRAP54198 1017 aaPredicted RBP16.61■□□□□ 0.25
CIT-214ENST00000544588 PAXIP1Q6ZW49 1069 aaPredicted RBP16.61■□□□□ 0.25
CIT-214ENST00000544588 PODNQ7Z5L7 613 aa16.61■□□□□ 0.25
CIT-214ENST00000544588 HELBQ8NG08 1087 aaPredicted RBP16.61■□□□□ 0.25
CIT-214ENST00000544588 SUCLG2Q96I99 432 aa16.61■□□□□ 0.25
CIT-214ENST00000544588 ZNF594Q96JF6 807 aaPredicted RBP16.61■□□□□ 0.25
CIT-214ENST00000544588 CNNM1Q9NRU3 951 aa16.61■□□□□ 0.25
CIT-214ENST00000544588 COL4A1P02462 1669 aa16.61■□□□□ 0.25
CIT-214ENST00000544588 ZNF804BA4D1E1 1349 aa16.61■□□□□ 0.25
CIT-214ENST00000544588 DDX60Q8IY21 1712 aaKnown RBP16.6■□□□□ 0.25
CIT-214ENST00000544588 USP17L3A6NCW0 530 aa16.6■□□□□ 0.25
CIT-214ENST00000544588 USP17L4A6NCW7 530 aa16.6■□□□□ 0.25
CIT-214ENST00000544588 TAF5LO75529 589 aa16.6■□□□□ 0.25
CIT-214ENST00000544588 NBPF7P0C2Y1 421 aaPredicted RBP16.6■□□□□ 0.25
CIT-214ENST00000544588 ALDH1L2Q3SY69 923 aa16.6■□□□□ 0.25
CIT-214ENST00000544588 RSBN1LQ6PCB5 846 aaPredicted RBP16.6■□□□□ 0.25
CIT-214ENST00000544588 LDHAL6AQ6ZMR3 332 aa16.6■□□□□ 0.25
CIT-214ENST00000544588 USP17L1Q7RTZ2 530 aa16.6■□□□□ 0.25
CIT-214ENST00000544588 JMYQ8N9B5 988 aa16.6■□□□□ 0.25
CIT-214ENST00000544588 GLIS2Q9BZE0 524 aaPredicted RBP16.6■□□□□ 0.25
CIT-214ENST00000544588 ZNF408Q9H9D4 720 aa16.6■□□□□ 0.25
CIT-214ENST00000544588 DUOX1Q9NRD9 1551 aa16.6■□□□□ 0.25
CIT-214ENST00000544588 TRMT2AQ8IZ69 625 aaKnown RBP16.59■□□□□ 0.25
CIT-214ENST00000544588 ZC3H15Q8WU90 426 aaKnown RBP16.59■□□□□ 0.25
CIT-214ENST00000544588 SNAP23O00161 211 aa16.58■□□□□ 0.24
CIT-214ENST00000544588 CELF2O95319 508 aaKnown RBP16.58■□□□□ 0.24
CIT-214ENST00000544588 GRM1Q13255 1194 aa16.58■□□□□ 0.24
CIT-214ENST00000544588 KIF4BQ2VIQ3 1234 aa16.58■□□□□ 0.24
CIT-214ENST00000544588 DEFB115Q30KQ5 88 aa16.58■□□□□ 0.24
CIT-214ENST00000544588 CDC37L1Q7L3B6 337 aa16.58■□□□□ 0.24
CIT-214ENST00000544588 USP48Q86UV5 1035 aa16.58■□□□□ 0.24
CIT-214ENST00000544588 TXNRD3Q86VQ6 643 aa16.58■□□□□ 0.24
CIT-214ENST00000544588 COA1Q9GZY4 146 aa16.58■□□□□ 0.24
CIT-214ENST00000544588 NOB1Q9ULX3 412 aaKnown RBP16.58■□□□□ 0.24
CIT-214ENST00000544588 LAMB2P55268 1798 aa16.58■□□□□ 0.24
CIT-214ENST00000544588 MED23Q9ULK4 1368 aa16.57■□□□□ 0.24
CIT-214ENST00000544588 EGFRP00533 1210 aa16.57■□□□□ 0.24
CIT-214ENST00000544588 CT47B1P0C2W7 299 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms