RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ATG3Q9NT62 314 aa5.72□□□□□ -1.49
SNHG1-220ENST00000544550 SLC27A5Q9Y2P5 690 aa5.72□□□□□ -1.49
SNHG1-220ENST00000544550 USP42Q9H9J4 1324 aaKnown RBP5.72□□□□□ -1.49
SNHG1-220ENST00000544550 BRCA1P38398 1863 aaKnown RBP5.71□□□□□ -1.5
SNHG1-220ENST00000544550 POLRMTO00411 1230 aaKnown RBP5.71□□□□□ -1.5
SNHG1-220ENST00000544550 RAD21O60216 631 aa5.71□□□□□ -1.5
SNHG1-220ENST00000544550 HSP90AB1P08238 724 aaKnown RBP5.71□□□□□ -1.5
SNHG1-220ENST00000544550 ECE1P42892 770 aa5.71□□□□□ -1.5
SNHG1-220ENST00000544550 CTDSPL2Q05D32 466 aa5.71□□□□□ -1.5
SNHG1-220ENST00000544550 DDR1Q08345 913 aa5.71□□□□□ -1.5
SNHG1-220ENST00000544550 RRS1Q15050 365 aaKnown RBP5.71□□□□□ -1.5
SNHG1-220ENST00000544550 PUS10Q3MIT2 529 aaKnown RBP5.71□□□□□ -1.5
SNHG1-220ENST00000544550 SYMPKQ92797 1274 aaKnown RBP5.71□□□□□ -1.5
SNHG1-220ENST00000544550 C1orf115Q9H7X2 142 aa5.71□□□□□ -1.5
SNHG1-220ENST00000544550 KAT6BQ8WYB5 2073 aa5.71□□□□□ -1.5
SNHG1-220ENST00000544550 WDR33Q9C0J8 1336 aaKnown RBP5.71□□□□□ -1.5
SNHG1-220ENST00000544550 ERVV-2B6SEH9 535 aa5.7□□□□□ -1.5
SNHG1-220ENST00000544550 H0YIN7 160 aa5.7□□□□□ -1.5
SNHG1-220ENST00000544550 APBB1O00213 710 aa5.7□□□□□ -1.5
SNHG1-220ENST00000544550 NFKBIEO00221 500 aa5.7□□□□□ -1.5
SNHG1-220ENST00000544550 CA12O43570 354 aa5.7□□□□□ -1.5
SNHG1-220ENST00000544550 ZPR1O75312 459 aa5.7□□□□□ -1.5
SNHG1-220ENST00000544550 DGAT1O75907 488 aa5.7□□□□□ -1.5
SNHG1-220ENST00000544550 PHKG2P15735 406 aa5.7□□□□□ -1.5
SNHG1-220ENST00000544550 INSM1Q01101 510 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-220ENST00000544550 Q3C1V9 767 aa5.7□□□□□ -1.5
SNHG1-220ENST00000544550 PKDCCQ504Y2 493 aa5.7□□□□□ -1.5
SNHG1-220ENST00000544550 RETREG3Q86VR2 466 aa5.7□□□□□ -1.5
SNHG1-220ENST00000544550 HELBQ8NG08 1087 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-220ENST00000544550 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.7□□□□□ -1.5
SNHG1-220ENST00000544550 ABT1Q9ULW3 272 aaKnown RBP5.7□□□□□ -1.5
SNHG1-220ENST00000544550 SALL2Q9Y467 1007 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-220ENST00000544550 LTBP3Q9NS15 1303 aa5.7□□□□□ -1.5
SNHG1-220ENST00000544550 MAP2P11137 1827 aaKnown RBP5.69□□□□□ -1.5
SNHG1-220ENST00000544550 ZNF831Q5JPB2 1677 aa5.69□□□□□ -1.5
SNHG1-220ENST00000544550 TONSLQ96HA7 1378 aa5.69□□□□□ -1.5
SNHG1-220ENST00000544550 NCAPD2Q15021 1401 aa5.69□□□□□ -1.5
SNHG1-220ENST00000544550 FBLN1P23142 703 aa5.69□□□□□ -1.5
SNHG1-220ENST00000544550 TM4SF1P30408 202 aa5.69□□□□□ -1.5
SNHG1-220ENST00000544550 HSP90AB2PQ58FF8 381 aa5.69□□□□□ -1.5
SNHG1-220ENST00000544550 SOGA3Q5TF21 947 aa5.69□□□□□ -1.5
SNHG1-220ENST00000544550 PPP1R18Q6NYC8 613 aa5.69□□□□□ -1.5
SNHG1-220ENST00000544550 PNMA8AQ86V59 439 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-220ENST00000544550 C2CD5Q86YS7 1000 aa5.69□□□□□ -1.5
SNHG1-220ENST00000544550 PRR7Q8TB68 274 aa5.69□□□□□ -1.5
SNHG1-220ENST00000544550 L3MBTL2Q969R5 705 aa5.69□□□□□ -1.5
SNHG1-220ENST00000544550 TAOK3Q9H2K8 898 aa5.69□□□□□ -1.5
SNHG1-220ENST00000544550 TAF1DQ9H5J8 278 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-220ENST00000544550 IL21Q9HBE4 155 aa5.69□□□□□ -1.5
SNHG1-220ENST00000544550 SRP68Q9UHB9 627 aaKnown RBP5.69□□□□□ -1.5
SNHG1-220ENST00000544550 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
SNHG1-220ENST00000544550 DDNO94850 711 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-220ENST00000544550 CRKLP46109 303 aaKnown RBP5.68□□□□□ -1.5
SNHG1-220ENST00000544550 EAPPQ56P03 285 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-220ENST00000544550 DESI1Q6ICB0 168 aa5.68□□□□□ -1.5
SNHG1-220ENST00000544550 BRICD5Q6PL45 260 aa5.68□□□□□ -1.5
SNHG1-220ENST00000544550 BLOC1S3Q6QNY0 202 aa5.68□□□□□ -1.5
SNHG1-220ENST00000544550 RNF19BQ6ZMZ0 732 aa5.68□□□□□ -1.5
SNHG1-220ENST00000544550 SCUBE3Q8IX30 993 aa5.68□□□□□ -1.5
SNHG1-220ENST00000544550 LRRN4Q8WUT4 740 aa5.68□□□□□ -1.5
SNHG1-220ENST00000544550 GCC1Q96CN9 775 aa5.68□□□□□ -1.5
SNHG1-220ENST00000544550 THAP11Q96EK4 314 aa5.68□□□□□ -1.5
SNHG1-220ENST00000544550 SLC4A9Q96Q91 983 aa5.68□□□□□ -1.5
SNHG1-220ENST00000544550 TRIM34Q9BYJ4 488 aa5.68□□□□□ -1.5
SNHG1-220ENST00000544550 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
SNHG1-220ENST00000544550 MCOLN1Q9GZU1 580 aa5.68□□□□□ -1.5
SNHG1-220ENST00000544550 GDPD2Q9HCC8 539 aa5.68□□□□□ -1.5
SNHG1-220ENST00000544550 PRM3Q9NNZ6 103 aa5.68□□□□□ -1.5
SNHG1-220ENST00000544550 HMX1Q9NP08 348 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-220ENST00000544550 PCDHB3Q9Y5E6 796 aa5.68□□□□□ -1.5
SNHG1-220ENST00000544550 TIAM2Q8IVF5 1701 aa5.68□□□□□ -1.5
SNHG1-220ENST00000544550 NR1I2O75469 434 aa5.67□□□□□ -1.5
SNHG1-220ENST00000544550 SERPINB2P05120 415 aa5.67□□□□□ -1.5
SNHG1-220ENST00000544550 PDE6BP35913 854 aa5.67□□□□□ -1.5
SNHG1-220ENST00000544550 MAP2K2P36507 400 aa5.67□□□□□ -1.5
SNHG1-220ENST00000544550 CABP4P57796 275 aa5.67□□□□□ -1.5
SNHG1-220ENST00000544550 USPL1Q5W0Q7 1092 aa5.67□□□□□ -1.5
SNHG1-220ENST00000544550 CNTROBQ8N137 903 aa5.67□□□□□ -1.5
SNHG1-220ENST00000544550 TSC1Q92574 1164 aa5.67□□□□□ -1.5
SNHG1-220ENST00000544550 ZNF622Q969S3 477 aaKnown RBP eCLIP5.67□□□□□ -1.5
SNHG1-220ENST00000544550 GPR101Q96P66 508 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-220ENST00000544550 CARD11Q9BXL7 1154 aa5.67□□□□□ -1.5
SNHG1-220ENST00000544550 HACL1Q9UJ83 578 aa5.67□□□□□ -1.5
SNHG1-220ENST00000544550 TBC1D2BQ9UPU7 963 aa5.67□□□□□ -1.5
SNHG1-220ENST00000544550 PCNTO95613 3336 aa5.67□□□□□ -1.5
SNHG1-220ENST00000544550 FYB1O15117 783 aa5.66□□□□□ -1.5
SNHG1-220ENST00000544550 PER1O15534 1290 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-220ENST00000544550 C21orf2O43822 256 aa5.66□□□□□ -1.5
SNHG1-220ENST00000544550 EPHX2P34913 555 aa5.66□□□□□ -1.5
SNHG1-220ENST00000544550 DGKZQ13574 1117 aa5.66□□□□□ -1.5
SNHG1-220ENST00000544550 NFIXQ14938 502 aa5.66□□□□□ -1.5
SNHG1-220ENST00000544550 TJAP1Q5JTD0 557 aa5.66□□□□□ -1.5
SNHG1-220ENST00000544550 CNKSR1Q969H4 720 aa5.66□□□□□ -1.5
SNHG1-220ENST00000544550 CAPNS2Q96L46 248 aa5.66□□□□□ -1.5
SNHG1-220ENST00000544550 USB1Q9BQ65 265 aaKnown RBP5.66□□□□□ -1.5
SNHG1-220ENST00000544550 GGNBP2Q9H3C7 697 aa5.66□□□□□ -1.5
SNHG1-220ENST00000544550 DDX21Q9NR30 783 aaKnown RBP eCLIP5.66□□□□□ -1.51e-323■■■□□ 15.6
SNHG1-220ENST00000544550 NARFQ9UHQ1 456 aa5.66□□□□□ -1.5
SNHG1-220ENST00000544550 NDUFB9Q9Y6M9 179 aa5.66□□□□□ -1.5
SNHG1-220ENST00000544550 ITGB4P16144 1822 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms