RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 TIMM10P62072 90 aa37.19■■■■□ 3.54
CCM2-219ENST00000544363 NEUROD6Q96NK8 337 aa37.19■■■■□ 3.54
CCM2-219ENST00000544363 A0A1B0GUL7 405 aa37.18■■■■□ 3.54
CCM2-219ENST00000544363 ST5P78524 1137 aa37.18■■■■□ 3.54
CCM2-219ENST00000544363 VGLL2Q8N8G2 317 aa37.18■■■■□ 3.54
CCM2-219ENST00000544363 QSER1Q2KHR3 1735 aa37.17■■■■□ 3.54
CCM2-219ENST00000544363 ANKRD18AQ8IVF6 992 aa37.17■■■■□ 3.54
CCM2-219ENST00000544363 RILPL2Q969X0 211 aa37.17■■■■□ 3.54
CCM2-219ENST00000544363 TNRC6CQ9HCJ0 1690 aaKnown RBP37.17■■■■□ 3.54
CCM2-219ENST00000544363 PDE8BO95263 885 aa37.15■■■■□ 3.54
CCM2-219ENST00000544363 ATP5JP18859 108 aa37.14■■■■□ 3.54
CCM2-219ENST00000544363 CNTROBQ8N137 903 aa37.14■■■■□ 3.54
CCM2-219ENST00000544363 SPEF2Q9C093 1822 aa37.13■■■■□ 3.53
CCM2-219ENST00000544363 COL4A1P02462 1669 aa37.13■■■■□ 3.53
CCM2-219ENST00000544363 MAP4K4O95819 1239 aaPredicted RBP37.13■■■■□ 3.53
CCM2-219ENST00000544363 ATP2B3Q16720 1220 aa37.13■■■■□ 3.53
CCM2-219ENST00000544363 CASC1Q6TDU7 716 aa37.12■■■■□ 3.53
CCM2-219ENST00000544363 BSDC1Q9NW68 430 aaPredicted RBP37.12■■■■□ 3.53
CCM2-219ENST00000544363 DDX46Q7L014 1031 aaKnown RBP37.11■■■■□ 3.53
CCM2-219ENST00000544363 CELF1Q92879 486 aaKnown RBP37.11■■■■□ 3.53
CCM2-219ENST00000544363 BOLA2Q9H3K6 86 aa37.1■■■■□ 3.53
CCM2-219ENST00000544363 XAGE2Q96GT9 111 aa37.1■■■■□ 3.53
CCM2-219ENST00000544363 TAF1P21675 1872 aa37.09■■■■□ 3.53
CCM2-219ENST00000544363 RPS8P62241 208 aaKnown RBP37.09■■■■□ 3.53
CCM2-219ENST00000544363 HELBQ8NG08 1087 aaPredicted RBP37.09■■■■□ 3.53
CCM2-219ENST00000544363 UPF2Q9HAU5 1272 aaKnown RBP37.09■■■■□ 3.53
CCM2-219ENST00000544363 NRXN2Q9P2S2 1712 aa37.09■■■■□ 3.53
CCM2-219ENST00000544363 MMP10P09238 476 aa37.08■■■■□ 3.53
CCM2-219ENST00000544363 PUM3Q15397 648 aaKnown RBP37.08■■■■□ 3.53
CCM2-219ENST00000544363 PARP3Q9Y6F1 533 aa37.08■■■■□ 3.53
CCM2-219ENST00000544363 MFAP1P55081 439 aaKnown RBP37.07■■■■□ 3.53
CCM2-219ENST00000544363 CHRNDQ07001 517 aa37.07■■■■□ 3.53
CCM2-219ENST00000544363 MSL1Q68DK7 614 aa37.07■■■■□ 3.53
CCM2-219ENST00000544363 AK9Q5TCS8 1911 aa37.07■■■■□ 3.52
CCM2-219ENST00000544363 EIF5BO60841 1220 aaKnown RBP37.07■■■■□ 3.52
CCM2-219ENST00000544363 ADORA1P30542 326 aa37.07■■■■□ 3.52
CCM2-219ENST00000544363 CRY2Q49AN0 593 aa37.07■■■■□ 3.52
CCM2-219ENST00000544363 EVI5LQ96CN4 794 aa37.07■■■■□ 3.52
CCM2-219ENST00000544363 FGFR2P21802 821 aa37.06■■■■□ 3.52
CCM2-219ENST00000544363 GORABQ5T7V8 394 aa37.05■■■■□ 3.52
CCM2-219ENST00000544363 LPIN2Q92539 896 aa37.05■■■■□ 3.52
CCM2-219ENST00000544363 CHMLP26374 656 aa37.04■■■■□ 3.52
CCM2-219ENST00000544363 CCDC158Q5M9N0 1113 aa37.04■■■■□ 3.52
CCM2-219ENST00000544363 TAF5LO75529 589 aa37.03■■■■□ 3.52
CCM2-219ENST00000544363 RPGRQ92834 1020 aaKnown RBP37.03■■■■□ 3.52
CCM2-219ENST00000544363 HAUS7Q99871 368 aa37.03■■■■□ 3.52
CCM2-219ENST00000544363 MINPP1Q9UNW1 487 aa37.03■■■■□ 3.52
CCM2-219ENST00000544363 KLRG2A4D1S0 409 aaPredicted RBP37.03■■■■□ 3.52
CCM2-219ENST00000544363 PPIL4Q8WUA2 492 aaKnown RBP eCLIP37.03■■■■□ 3.52
CCM2-219ENST00000544363 GRAPQ13588 217 aa37.02■■■■□ 3.52
CCM2-219ENST00000544363 GRAPLQ8TC17 118 aaPredicted RBP37.02■■■■□ 3.52
CCM2-219ENST00000544363 SLC5A1P13866 664 aa37.01■■■■□ 3.52
CCM2-219ENST00000544363 BRIP1Q9BX63 1249 aa37.01■■■■□ 3.52
CCM2-219ENST00000544363 TTC39AQ5SRH9 613 aa37■■■■□ 3.51
CCM2-219ENST00000544363 RBM17Q96I25 401 aaKnown RBP36.99■■■■□ 3.51
CCM2-219ENST00000544363 ARAP2Q8WZ64 1704 aa36.98■■■■□ 3.51
CCM2-219ENST00000544363 IFIT1P09914 478 aaKnown RBP36.98■■■■□ 3.51
CCM2-219ENST00000544363 A0A1B0GUL6 1792 aa36.97■■■■□ 3.51
CCM2-219ENST00000544363 HOXA10P31260 410 aaPredicted RBP36.97■■■■□ 3.51
CCM2-219ENST00000544363 DNAJC2Q99543 621 aaKnown RBP36.97■■■■□ 3.51
CCM2-219ENST00000544363 ANKRD31Q8N7Z5 1873 aa36.96■■■■□ 3.51
CCM2-219ENST00000544363 TBC1D32Q96NH3 1257 aa36.96■■■■□ 3.51
CCM2-219ENST00000544363 SNAP23O00161 211 aa36.96■■■■□ 3.51
CCM2-219ENST00000544363 ZNF512BQ96KM6 892 aaPredicted RBP36.96■■■■□ 3.51
CCM2-219ENST00000544363 ESYT1Q9BSJ8 1104 aa36.96■■■■□ 3.51
CCM2-219ENST00000544363 ANKRD2Q9GZV1 360 aa36.95■■■■□ 3.51
CCM2-219ENST00000544363 UBE4AQ14139 1066 aa36.94■■■■□ 3.5
CCM2-219ENST00000544363 EDC3Q96F86 508 aaKnown RBP36.94■■■■□ 3.5
CCM2-219ENST00000544363 C22orf23Q9BZE7 217 aa36.94■■■■□ 3.5
CCM2-219ENST00000544363 PDGFDQ9GZP0 370 aaPredicted RBP36.94■■■■□ 3.5
CCM2-219ENST00000544363 NDUFB9Q9Y6M9 179 aa36.94■■■■□ 3.5
CCM2-219ENST00000544363 ANP32AP39687 249 aaKnown RBP36.93■■■■□ 3.5
CCM2-219ENST00000544363 CRAMP1Q96RY5 1269 aa36.93■■■■□ 3.5
CCM2-219ENST00000544363 PDE6BP35913 854 aa36.92■■■■□ 3.5
CCM2-219ENST00000544363 CCDC102BQ68D86 513 aa36.92■■■■□ 3.5
CCM2-219ENST00000544363 FSD1Q9BTV5 496 aa36.92■■■■□ 3.5
CCM2-219ENST00000544363 HIP1O00291 1037 aa36.92■■■■□ 3.5
CCM2-219ENST00000544363 SLC16A10Q8TF71 515 aa36.92■■■■□ 3.5
CCM2-219ENST00000544363 PAG1Q9NWQ8 432 aa36.92■■■■□ 3.5
CCM2-219ENST00000544363 REC8O95072 547 aa36.91■■■■□ 3.5
CCM2-219ENST00000544363 DIAPH3Q9NSV4 1193 aa36.91■■■■□ 3.5
CCM2-219ENST00000544363 PHKA1P46020 1223 aa36.9■■■■□ 3.5
CCM2-219ENST00000544363 UQCRFS1P1P0C7P4 283 aa36.89■■■■□ 3.5
CCM2-219ENST00000544363 ARID4AP29374 1257 aaPredicted RBP36.89■■■■□ 3.5
CCM2-219ENST00000544363 UPF1Q92900 1129 aaKnown RBP eCLIP36.89■■■■□ 3.5
CCM2-219ENST00000544363 GOLIM4O00461 696 aa36.88■■■■□ 3.5
CCM2-219ENST00000544363 BBOX1O75936 387 aa36.88■■■■□ 3.5
CCM2-219ENST00000544363 SCARF1Q14162 830 aa36.88■■■■□ 3.5
CCM2-219ENST00000544363 RFX7Q2KHR2 1363 aa36.88■■■■□ 3.49
CCM2-219ENST00000544363 KBTBD3Q8NAB2 608 aa36.88■■■■□ 3.49
CCM2-219ENST00000544363 SRGNP10124 158 aa36.87■■■■□ 3.49
CCM2-219ENST00000544363 RUFY2Q8WXA3 655 aa36.87■■■■□ 3.49
CCM2-219ENST00000544363 NPR1P16066 1061 aa36.86■■■■□ 3.49
CCM2-219ENST00000544363 MCAMP43121 646 aa36.86■■■■□ 3.49
CCM2-219ENST00000544363 FKBP4Q02790 459 aaKnown RBP eCLIP36.86■■■■□ 3.49
CCM2-219ENST00000544363 TICAM2Q86XR7 235 aa36.86■■■■□ 3.49
CCM2-219ENST00000544363 SGSM2O43147 1006 aa36.85■■■■□ 3.49
CCM2-219ENST00000544363 RBM25P49756 843 aaKnown RBP36.85■■■■□ 3.49
CCM2-219ENST00000544363 CWC27Q6UX04 472 aaKnown RBP36.85■■■■□ 3.49
CCM2-219ENST00000544363 USP26Q9BXU7 913 aa36.85■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms