RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 ONECUT3O60422 494 aaPredicted RBP16.54■□□□□ 0.24
HCFC2-202ENST00000544223 CIAO1O76071 339 aa16.54■□□□□ 0.24
HCFC2-202ENST00000544223 IFIT1P09914 478 aaKnown RBP16.54■□□□□ 0.24
HCFC2-202ENST00000544223 SNX14Q9Y5W7 946 aa16.54■□□□□ 0.24
HCFC2-202ENST00000544223 HSPA4P34932 840 aa16.54■□□□□ 0.24
HCFC2-202ENST00000544223 PAG1Q9NWQ8 432 aa16.54■□□□□ 0.24
HCFC2-202ENST00000544223 NHSQ6T4R5 1651 aa16.53■□□□□ 0.24
HCFC2-202ENST00000544223 RREB1Q92766 1687 aa16.53■□□□□ 0.24
HCFC2-202ENST00000544223 A0A0G2JLW4 131 aa16.53■□□□□ 0.24
HCFC2-202ENST00000544223 GTF2E1P29083 439 aaPredicted RBP16.53■□□□□ 0.24
HCFC2-202ENST00000544223 ATP2B3Q16720 1220 aa16.53■□□□□ 0.24
HCFC2-202ENST00000544223 TCEANC2Q96MN5 208 aa16.53■□□□□ 0.24
HCFC2-202ENST00000544223 DDX60Q8IY21 1712 aaKnown RBP16.53■□□□□ 0.24
HCFC2-202ENST00000544223 PKP1Q13835 747 aa16.52■□□□□ 0.24
HCFC2-202ENST00000544223 ZAP70P43403 619 aa16.52■□□□□ 0.23
HCFC2-202ENST00000544223 KCNJ4P48050 445 aa16.52■□□□□ 0.23
HCFC2-202ENST00000544223 TTC39AQ5SRH9 613 aa16.52■□□□□ 0.23
HCFC2-202ENST00000544223 VPS53Q5VIR6 699 aa16.52■□□□□ 0.23
HCFC2-202ENST00000544223 KRT27Q7Z3Y8 459 aa16.52■□□□□ 0.23
HCFC2-202ENST00000544223 VGLL2Q8N8G2 317 aa16.52■□□□□ 0.23
HCFC2-202ENST00000544223 RTCBQ9Y3I0 505 aaKnown RBP16.52■□□□□ 0.23
HCFC2-202ENST00000544223 ABCC12Q96J65 1359 aa16.51■□□□□ 0.23
HCFC2-202ENST00000544223 ZPR1O75312 459 aa16.51■□□□□ 0.23
HCFC2-202ENST00000544223 RPS6KA4O75676 772 aa16.51■□□□□ 0.23
HCFC2-202ENST00000544223 MCCP23508 829 aa16.51■□□□□ 0.23
HCFC2-202ENST00000544223 IQSEC3Q9UPP2 1182 aaPredicted RBP16.51■□□□□ 0.23
HCFC2-202ENST00000544223 RBM8AQ9Y5S9 174 aaKnown RBP16.51■□□□□ 0.23
HCFC2-202ENST00000544223 CCDC171Q6TFL3 1326 aa16.51■□□□□ 0.23
HCFC2-202ENST00000544223 CNTNAP4Q9C0A0 1308 aa16.51■□□□□ 0.23
HCFC2-202ENST00000544223 PHKA1P46020 1223 aa16.5■□□□□ 0.23
HCFC2-202ENST00000544223 CHAMP1Q96JM3 812 aa16.5■□□□□ 0.23
HCFC2-202ENST00000544223 MPHOSPH8Q99549 860 aa16.5■□□□□ 0.23
HCFC2-202ENST00000544223 ZNF652Q9Y2D9 606 aa16.5■□□□□ 0.23
HCFC2-202ENST00000544223 ST18O60284 1047 aa16.5■□□□□ 0.23
HCFC2-202ENST00000544223 PDE8BO95263 885 aa16.5■□□□□ 0.23
HCFC2-202ENST00000544223 CASTP20810 708 aaKnown RBP16.5■□□□□ 0.23
HCFC2-202ENST00000544223 MCAMP43121 646 aa16.5■□□□□ 0.23
HCFC2-202ENST00000544223 PARP10Q53GL7 1025 aa16.5■□□□□ 0.23
HCFC2-202ENST00000544223 FOXD4L5Q5VV16 416 aaPredicted RBP16.5■□□□□ 0.23
HCFC2-202ENST00000544223 RUFY2Q8WXA3 655 aa16.5■□□□□ 0.23
HCFC2-202ENST00000544223 FOXD4L4Q8WXT5 416 aaPredicted RBP16.5■□□□□ 0.23
HCFC2-202ENST00000544223 MYO5AQ9Y4I1 1855 aaKnown RBP16.5■□□□□ 0.23
HCFC2-202ENST00000544223 BCL11BQ9C0K0 894 aaPredicted RBP16.49■□□□□ 0.23
HCFC2-202ENST00000544223 NARFQ9UHQ1 456 aa16.49■□□□□ 0.23
HCFC2-202ENST00000544223 TAF1LQ8IZX4 1826 aa16.49■□□□□ 0.23
HCFC2-202ENST00000544223 KBTBD3Q8NAB2 608 aa16.49■□□□□ 0.23
HCFC2-202ENST00000544223 AK7Q96M32 723 aa16.49■□□□□ 0.23
HCFC2-202ENST00000544223 GPR108Q9NPR9 543 aa16.49■□□□□ 0.23
HCFC2-202ENST00000544223 BCORQ6W2J9 1755 aa16.49■□□□□ 0.23
HCFC2-202ENST00000544223 RFC4P35249 363 aa16.48■□□□□ 0.23
HCFC2-202ENST00000544223 DDIT3P35638 169 aa16.48■□□□□ 0.23
HCFC2-202ENST00000544223 CCDC158Q5M9N0 1113 aa16.48■□□□□ 0.23
HCFC2-202ENST00000544223 NBPF5PQ86XG9 351 aaPredicted RBP16.48■□□□□ 0.23
HCFC2-202ENST00000544223 CELF1Q92879 486 aaKnown RBP16.48■□□□□ 0.23
HCFC2-202ENST00000544223 TMX3Q96JJ7 454 aa16.48■□□□□ 0.23
HCFC2-202ENST00000544223 JAKMIP1Q96N16 626 aaKnown RBP16.48■□□□□ 0.23
HCFC2-202ENST00000544223 SETDB2Q96T68 719 aa16.48■□□□□ 0.23
HCFC2-202ENST00000544223 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.48■□□□□ 0.23
HCFC2-202ENST00000544223 PROM2Q8N271 834 aa16.48■□□□□ 0.23
HCFC2-202ENST00000544223 AKAP2Q9Y2D5 859 aa16.48■□□□□ 0.23
HCFC2-202ENST00000544223 NPHP1O15259 732 aa16.47■□□□□ 0.23
HCFC2-202ENST00000544223 NECTIN1Q15223 517 aa16.47■□□□□ 0.23
HCFC2-202ENST00000544223 CCDC152Q4G0S7 254 aa16.47■□□□□ 0.23
HCFC2-202ENST00000544223 CREB3L3Q68CJ9 461 aa16.47■□□□□ 0.23
HCFC2-202ENST00000544223 MED23Q9ULK4 1368 aa16.47■□□□□ 0.23
HCFC2-202ENST00000544223 M0R2C6 588 aa16.47■□□□□ 0.23
HCFC2-202ENST00000544223 TRAPPC3LQ5T215 181 aa16.47■□□□□ 0.23
HCFC2-202ENST00000544223 CLEC4GQ6UXB4 293 aa16.47■□□□□ 0.23
HCFC2-202ENST00000544223 MAP4K1Q92918 833 aa16.47■□□□□ 0.23
HCFC2-202ENST00000544223 CICQ96RK0 1608 aaPredicted RBP16.46■□□□□ 0.23
HCFC2-202ENST00000544223 SSFA2P28290 1259 aa16.46■□□□□ 0.23
HCFC2-202ENST00000544223 BCAMP50895 628 aa16.46■□□□□ 0.23
HCFC2-202ENST00000544223 CCDC102BQ68D86 513 aa16.46■□□□□ 0.23
HCFC2-202ENST00000544223 CHMP5Q9NZZ3 219 aa16.46■□□□□ 0.23
HCFC2-202ENST00000544223 CASZ1Q86V15 1759 aa16.46■□□□□ 0.23
HCFC2-202ENST00000544223 LY75O60449 1722 aa16.46■□□□□ 0.23
HCFC2-202ENST00000544223 C4BP0C0L5 1744 aa16.46■□□□□ 0.23
HCFC2-202ENST00000544223 SLC27A2O14975 620 aa16.46■□□□□ 0.22
HCFC2-202ENST00000544223 CHRNDQ07001 517 aa16.46■□□□□ 0.22
HCFC2-202ENST00000544223 OSBP2Q969R2 916 aa16.46■□□□□ 0.22
HCFC2-202ENST00000544223 LARGE1O95461 756 aa16.45■□□□□ 0.22
HCFC2-202ENST00000544223 AK2P54819 239 aa16.45■□□□□ 0.22
HCFC2-202ENST00000544223 RC3H1Q5TC82 1133 aaKnown RBP16.45■□□□□ 0.22
HCFC2-202ENST00000544223 CYP2E1P05181 493 aaPredicted RBP16.45■□□□□ 0.22
HCFC2-202ENST00000544223 WASHC4Q2M389 1173 aa16.45■□□□□ 0.22
HCFC2-202ENST00000544223 EIF5BO60841 1220 aaKnown RBP16.44■□□□□ 0.22
HCFC2-202ENST00000544223 KLRK1P26718 216 aa16.44■□□□□ 0.22
HCFC2-202ENST00000544223 IGHMBP2P38935 993 aaKnown RBP16.44■□□□□ 0.22
HCFC2-202ENST00000544223 MCMDC2Q4G0Z9 681 aa16.44■□□□□ 0.22
HCFC2-202ENST00000544223 TTLL5Q6EMB2 1281 aa16.44■□□□□ 0.22
HCFC2-202ENST00000544223 TNPO1Q92973 898 aaKnown RBP16.44■□□□□ 0.22
HCFC2-202ENST00000544223 PIH1D3Q9NQM4 214 aaKnown RBP16.44■□□□□ 0.22
HCFC2-202ENST00000544223 C4AP0C0L4 1744 aa16.44■□□□□ 0.22
HCFC2-202ENST00000544223 HIP1O00291 1037 aa16.44■□□□□ 0.22
HCFC2-202ENST00000544223 ANAPC15P60006 121 aa16.44■□□□□ 0.22
HCFC2-202ENST00000544223 NFIXQ14938 502 aa16.44■□□□□ 0.22
HCFC2-202ENST00000544223 PUS7LQ9H0K6 701 aaKnown RBP16.44■□□□□ 0.22
HCFC2-202ENST00000544223 AKAP11Q9UKA4 1901 aa16.43■□□□□ 0.22
HCFC2-202ENST00000544223 MAST3O60307 1309 aa16.43■□□□□ 0.22
HCFC2-202ENST00000544223 IDH1O75874 414 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms