RNA–Protein interactions for RNA: ENST00000542293.5

PAAF1-211, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-211ENST00000542293 TRIOBPQ9H2D6 2365 aa20.86■□□□□ 0.93
PAAF1-211ENST00000542293 HTATSF1O43719 755 aaKnown RBP20.85■□□□□ 0.93
PAAF1-211ENST00000542293 EN2P19622 333 aaPredicted RBP20.85■□□□□ 0.93
PAAF1-211ENST00000542293 EIF4A1P60842 406 aaKnown RBP20.85■□□□□ 0.93
PAAF1-211ENST00000542293 TMC4Q7Z404 712 aa20.85■□□□□ 0.93
PAAF1-211ENST00000542293 LRP10Q7Z4F1 713 aa20.85■□□□□ 0.93
PAAF1-211ENST00000542293 TRIM17Q9Y577 477 aa20.85■□□□□ 0.93
PAAF1-211ENST00000542293 COL4A1P02462 1669 aa20.85■□□□□ 0.93
PAAF1-211ENST00000542293 C6orf229H3BNL8 230 aa20.84■□□□□ 0.93
PAAF1-211ENST00000542293 ZNF280AP59817 542 aaPredicted RBP20.84■□□□□ 0.93
PAAF1-211ENST00000542293 OTOP1Q7RTM1 612 aa20.84■□□□□ 0.93
PAAF1-211ENST00000542293 THUMPD2Q9BTF0 503 aaKnown RBP20.84■□□□□ 0.93
PAAF1-211ENST00000542293 GPSM2P81274 684 aa20.83■□□□□ 0.93
PAAF1-211ENST00000542293 PRAMEF18Q5VWM3 479 aa20.83■□□□□ 0.93
PAAF1-211ENST00000542293 SREBF2Q12772 1141 aa20.82■□□□□ 0.92
PAAF1-211ENST00000542293 CNGB1Q14028 1251 aaPredicted RBP20.82■□□□□ 0.92
PAAF1-211ENST00000542293 NLRP10Q86W26 655 aa20.82■□□□□ 0.92
PAAF1-211ENST00000542293 PITPNM2Q9BZ72 1349 aa20.81■□□□□ 0.92
PAAF1-211ENST00000542293 CELF1Q92879 486 aaKnown RBP20.81■□□□□ 0.92
PAAF1-211ENST00000542293 PSME4Q14997 1843 aa20.81■□□□□ 0.92
PAAF1-211ENST00000542293 ERBB4Q15303 1308 aa20.8■□□□□ 0.92
PAAF1-211ENST00000542293 DLG5Q8TDM6 1919 aa20.8■□□□□ 0.92
PAAF1-211ENST00000542293 ZNF609O15014 1411 aa20.79■□□□□ 0.92
PAAF1-211ENST00000542293 TTLL12Q14166 644 aaPredicted RBP20.79■□□□□ 0.92
PAAF1-211ENST00000542293 PDIA6Q15084 440 aa20.79■□□□□ 0.92
PAAF1-211ENST00000542293 TBC1D16Q8TBP0 767 aa20.79■□□□□ 0.92
PAAF1-211ENST00000542293 OTUD5Q96G74 571 aa20.79■□□□□ 0.92
PAAF1-211ENST00000542293 EYA3Q99504 573 aa20.79■□□□□ 0.92
PAAF1-211ENST00000542293 TRMT112Q9UI30 125 aaKnown RBP20.79■□□□□ 0.92
PAAF1-211ENST00000542293 CEP290O15078 2479 aa20.79■□□□□ 0.92
PAAF1-211ENST00000542293 SH3TC1Q8TE82 1336 aa20.78■□□□□ 0.92
PAAF1-211ENST00000542293 PROSER3Q2NL68 480 aa20.78■□□□□ 0.92
PAAF1-211ENST00000542293 SLC17A8Q8NDX2 589 aa20.78■□□□□ 0.92
PAAF1-211ENST00000542293 AGBL3Q8NEM8 1001 aa20.78■□□□□ 0.92
PAAF1-211ENST00000542293 PNISRQ8TF01 805 aaKnown RBP20.78■□□□□ 0.92
PAAF1-211ENST00000542293 ARMC5Q96C12 935 aa20.78■□□□□ 0.92
PAAF1-211ENST00000542293 MYOZ2Q9NPC6 264 aa20.78■□□□□ 0.92
PAAF1-211ENST00000542293 PTPN22Q9Y2R2 807 aa20.78■□□□□ 0.92
PAAF1-211ENST00000542293 ANXA1P04083 346 aa20.77■□□□□ 0.92
PAAF1-211ENST00000542293 U2AF1L5P0DN76 240 aaPredicted RBP20.77■□□□□ 0.92
PAAF1-211ENST00000542293 U2AF1Q01081 240 aaKnown RBP eCLIP20.77■□□□□ 0.92
PAAF1-211ENST00000542293 PTPN12Q05209 780 aaKnown RBP20.77■□□□□ 0.92
PAAF1-211ENST00000542293 RSBN1LQ6PCB5 846 aaPredicted RBP20.77■□□□□ 0.92
PAAF1-211ENST00000542293 ZNF428Q96B54 188 aa20.77■□□□□ 0.92
PAAF1-211ENST00000542293 GMLQ99445 158 aa20.77■□□□□ 0.92
PAAF1-211ENST00000542293 H0YGN5 161 aa20.75■□□□□ 0.91
PAAF1-211ENST00000542293 ZC3H12CQ9C0D7 883 aaKnown RBP20.75■□□□□ 0.91
PAAF1-211ENST00000542293 NUDCQ9Y266 331 aa20.75■□□□□ 0.91
PAAF1-211ENST00000542293 ALDH1A1P00352 501 aa20.74■□□□□ 0.91
PAAF1-211ENST00000542293 USP17L8P0C7I0 530 aa20.74■□□□□ 0.91
PAAF1-211ENST00000542293 TCIRG1Q13488 830 aa20.74■□□□□ 0.91
PAAF1-211ENST00000542293 HSP90AB3PQ58FF7 597 aa20.74■□□□□ 0.91
PAAF1-211ENST00000542293 SPRYD7Q5W111 196 aa20.74■□□□□ 0.91
PAAF1-211ENST00000542293 CFAP53Q96M91 514 aa20.74■□□□□ 0.91
PAAF1-211ENST00000542293 A0A0C4DFX4 3053 aa20.74■□□□□ 0.91
PAAF1-211ENST00000542293 SF3B3Q15393 1217 aaKnown RBP20.73■□□□□ 0.91
PAAF1-211ENST00000542293 NBPF9Q3BBW0 867 aa20.73■□□□□ 0.91
PAAF1-211ENST00000542293 IFNL1Q8IU54 200 aa20.73■□□□□ 0.91
PAAF1-211ENST00000542293 CD99L2Q8TCZ2 262 aa20.73■□□□□ 0.91
PAAF1-211ENST00000542293 CAP1Q01518 475 aa20.72■□□□□ 0.91
PAAF1-211ENST00000542293 NECTIN2Q92692 538 aa20.72■□□□□ 0.91
PAAF1-211ENST00000542293 COL6A3P12111 3177 aa20.72■□□□□ 0.91
PAAF1-211ENST00000542293 LAMB1P07942 1786 aa20.72■□□□□ 0.91
PAAF1-211ENST00000542293 EIF2S2P20042 333 aaKnown RBP20.71■□□□□ 0.91
PAAF1-211ENST00000542293 PRKG1Q13976 671 aa20.71■□□□□ 0.91
PAAF1-211ENST00000542293 CHRDL2Q6WN34 429 aa20.71■□□□□ 0.91
PAAF1-211ENST00000542293 COPS6Q7L5N1 327 aa20.71■□□□□ 0.91
PAAF1-211ENST00000542293 ERO1AQ96HE7 468 aa20.71■□□□□ 0.91
PAAF1-211ENST00000542293 G3V3G9 751 aa20.7■□□□□ 0.9
PAAF1-211ENST00000542293 UFL1O94874 794 aa20.7■□□□□ 0.9
PAAF1-211ENST00000542293 NF2P35240 595 aa20.7■□□□□ 0.9
PAAF1-211ENST00000542293 AIMP1Q12904 312 aaKnown RBP20.7■□□□□ 0.9
PAAF1-211ENST00000542293 LDLRAD1Q5T700 205 aa20.7■□□□□ 0.9
PAAF1-211ENST00000542293 DCAF8Q5TAQ9 597 aa20.7■□□□□ 0.9
PAAF1-211ENST00000542293 TMEM106CQ9BVX2 250 aa20.7■□□□□ 0.9
PAAF1-211ENST00000542293 PODXL2Q9NZ53 605 aa20.7■□□□□ 0.9
PAAF1-211ENST00000542293 IGF2BP3O00425 579 aaKnown RBP eCLIP20.69■□□□□ 0.9
PAAF1-211ENST00000542293 XAGE3Q8WTP9 111 aa20.69■□□□□ 0.9
PAAF1-211ENST00000542293 ZNF333Q96JL9 665 aa20.69■□□□□ 0.9
PAAF1-211ENST00000542293 RANBP2P49792 3224 aaKnown RBP20.68■□□□□ 0.9
PAAF1-211ENST00000542293 MANSC4A6NHS7 340 aaPredicted RBP20.68■□□□□ 0.9
PAAF1-211ENST00000542293 RPS8P62241 208 aaKnown RBP20.68■□□□□ 0.9
PAAF1-211ENST00000542293 ARMC9Q7Z3E5 817 aa20.68■□□□□ 0.9
PAAF1-211ENST00000542293 FAM89AQ96GI7 184 aa20.68■□□□□ 0.9
PAAF1-211ENST00000542293 EFCC1Q9HA90 598 aa20.68■□□□□ 0.9
PAAF1-211ENST00000542293 RBM27Q9P2N5 1060 aaKnown RBP20.68■□□□□ 0.9
PAAF1-211ENST00000542293 FZD1Q9UP38 647 aa20.68■□□□□ 0.9
PAAF1-211ENST00000542293 ZNF646O15015 1829 aaPredicted RBP20.67■□□□□ 0.9
PAAF1-211ENST00000542293 INHBEP58166 350 aa20.67■□□□□ 0.9
PAAF1-211ENST00000542293 WNT10BO00744 389 aa20.66■□□□□ 0.9
PAAF1-211ENST00000542293 GGA1Q9UJY5 639 aa20.66■□□□□ 0.9
PAAF1-211ENST00000542293 ANGEL1Q9UNK9 670 aaKnown RBP20.66■□□□□ 0.9
PAAF1-211ENST00000542293 CUL9Q8IWT3 2517 aa20.66■□□□□ 0.9
PAAF1-211ENST00000542293 USP17L3A6NCW0 530 aa20.65■□□□□ 0.9
PAAF1-211ENST00000542293 USP17L4A6NCW7 530 aa20.65■□□□□ 0.9
PAAF1-211ENST00000542293 CRHR2Q13324 411 aa20.65■□□□□ 0.9
PAAF1-211ENST00000542293 USP17L1Q7RTZ2 530 aa20.65■□□□□ 0.9
PAAF1-211ENST00000542293 ANKIB1Q9P2G1 1089 aa20.65■□□□□ 0.9
PAAF1-211ENST00000542293 MXD3Q9BW11 206 aa20.64■□□□□ 0.89
PAAF1-211ENST00000542293 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms