RNA–Protein interactions for RNA: ENST00000541864.6

SLC12A4-204, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-204ENST00000541864 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.65□□□□□ -0.22
SLC12A4-204ENST00000541864 PLBD2Q8NHP8 589 aa13.65□□□□□ -0.22
SLC12A4-204ENST00000541864 NCOA5Q9HCD5 579 aaKnown RBP13.65□□□□□ -0.22
SLC12A4-204ENST00000541864 COPRSQ9NQ92 184 aa13.65□□□□□ -0.22
SLC12A4-204ENST00000541864 UTYO14607 1347 aa13.65□□□□□ -0.22
SLC12A4-204ENST00000541864 POLR3DP05423 398 aaPredicted RBP13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 PDCP20941 246 aa13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 Q6ZUG5 572 aa13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 ERCC4Q92889 916 aaPredicted RBP13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 NUP62CLQ9H1M0 184 aa13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 MED1Q15648 1581 aaPredicted RBP13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 TRDNQ13061 729 aa13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 ANKRD1Q15327 319 aa13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 CCDC158Q5M9N0 1113 aa13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 CDC37L1Q7L3B6 337 aa13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 CWC25Q9NXE8 425 aaPredicted RBP13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 KDM3BQ7LBC6 1761 aa13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 KCNA4P22459 653 aa13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 RPS6KB1P23443 525 aa13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 METTL24Q5JXM2 366 aa13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 BICDL1Q6ZP65 573 aa13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 CCDC73Q6ZRK6 1079 aa13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 FILIP1Q7Z7B0 1213 aa13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 NEK1Q96PY6 1258 aa13.64□□□□□ -0.23
SLC12A4-204ENST00000541864 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.64□□□□□ -0.237e-11■□□□□ 8.5
SLC12A4-204ENST00000541864 TAF5LO75529 589 aa13.63□□□□□ -0.23
SLC12A4-204ENST00000541864 ATP5JP18859 108 aa13.63□□□□□ -0.23
SLC12A4-204ENST00000541864 RXRAP19793 462 aa13.63□□□□□ -0.23
SLC12A4-204ENST00000541864 PIBF1Q8WXW3 757 aa13.63□□□□□ -0.23
SLC12A4-204ENST00000541864 UQCRHLA0A096LP55 91 aa13.63□□□□□ -0.23
SLC12A4-204ENST00000541864 UQCRHP07919 91 aa13.63□□□□□ -0.23
SLC12A4-204ENST00000541864 OTUD7BQ6GQQ9 843 aa13.63□□□□□ -0.23
SLC12A4-204ENST00000541864 CCDC192P0DO97 292 aa13.63□□□□□ -0.23
SLC12A4-204ENST00000541864 APOBRQ0VD83 1088 aa13.63□□□□□ -0.23
SLC12A4-204ENST00000541864 KIF6Q6ZMV9 814 aa13.63□□□□□ -0.23
SLC12A4-204ENST00000541864 DACT1Q9NYF0 836 aa13.63□□□□□ -0.23
SLC12A4-204ENST00000541864 TBC1D2BQ9UPU7 963 aa13.63□□□□□ -0.23
SLC12A4-204ENST00000541864 NBPF26B4DH59 902 aa13.62□□□□□ -0.23
SLC12A4-204ENST00000541864 NBPF14Q5TI25 921 aa13.62□□□□□ -0.23
SLC12A4-204ENST00000541864 NBPF10Q6P3W6 841 aaKnown RBP13.62□□□□□ -0.23
SLC12A4-204ENST00000541864 NBPF15Q8N660 670 aa13.62□□□□□ -0.23
SLC12A4-204ENST00000541864 IL17RAQ96F46 866 aa13.62□□□□□ -0.23
SLC12A4-204ENST00000541864 LMO7Q8WWI1 1683 aa13.62□□□□□ -0.23
SLC12A4-204ENST00000541864 A0A087WWV3 80 aa13.62□□□□□ -0.23
SLC12A4-204ENST00000541864 BIN1O00499 593 aa13.62□□□□□ -0.23
SLC12A4-204ENST00000541864 MCMDC2Q4G0Z9 681 aa13.62□□□□□ -0.23
SLC12A4-204ENST00000541864 TMOD3Q9NYL9 352 aa13.62□□□□□ -0.23
SLC12A4-204ENST00000541864 ST3GAL1Q11201 340 aa13.62□□□□□ -0.23
SLC12A4-204ENST00000541864 SLC4A8Q2Y0W8 1093 aa13.62□□□□□ -0.23
SLC12A4-204ENST00000541864 LRRC24Q50LG9 513 aa13.62□□□□□ -0.23
SLC12A4-204ENST00000541864 TSC1Q92574 1164 aa13.62□□□□□ -0.23
SLC12A4-204ENST00000541864 SLIT3O75094 1523 aa13.61□□□□□ -0.23
SLC12A4-204ENST00000541864 RFX5P48382 616 aaPredicted RBP13.61□□□□□ -0.23
SLC12A4-204ENST00000541864 RGPD5Q99666 1765 aa13.61□□□□□ -0.23
SLC12A4-204ENST00000541864 GOLGA6L6A8MZA4 724 aa13.61□□□□□ -0.23
SLC12A4-204ENST00000541864 LDHAL6AQ6ZMR3 332 aa13.61□□□□□ -0.23
SLC12A4-204ENST00000541864 KIF3AQ9Y496 699 aa13.61□□□□□ -0.23
SLC12A4-204ENST00000541864 OVOS2A0A0G2JMS6 1433 aa13.61□□□□□ -0.23
SLC12A4-204ENST00000541864 KRT32Q14532 448 aa13.6□□□□□ -0.23
SLC12A4-204ENST00000541864 MAP3K11Q16584 847 aa13.6□□□□□ -0.23
SLC12A4-204ENST00000541864 SYNE3Q6ZMZ3 975 aa13.6□□□□□ -0.23
SLC12A4-204ENST00000541864 HMG20BQ9P0W2 317 aa13.6□□□□□ -0.23
SLC12A4-204ENST00000541864 TCHHQ07283 1943 aa13.6□□□□□ -0.23
SLC12A4-204ENST00000541864 PAG1Q9NWQ8 432 aa13.6□□□□□ -0.23
SLC12A4-204ENST00000541864 U3KPZ7 1027 aaPredicted RBP13.6□□□□□ -0.23
SLC12A4-204ENST00000541864 SPATA31A3Q5VYP0 1347 aa13.6□□□□□ -0.23
SLC12A4-204ENST00000541864 KINO60870 393 aaKnown RBP13.6□□□□□ -0.23
SLC12A4-204ENST00000541864 LETM1O95202 739 aaPredicted RBP13.6□□□□□ -0.23
SLC12A4-204ENST00000541864 STK38Q15208 465 aa13.6□□□□□ -0.23
SLC12A4-204ENST00000541864 TTLL5Q6EMB2 1281 aa13.6□□□□□ -0.23
SLC12A4-204ENST00000541864 ACSBG1Q96GR2 724 aa13.6□□□□□ -0.23
SLC12A4-204ENST00000541864 PUS3Q9BZE2 481 aaKnown RBP13.6□□□□□ -0.23
SLC12A4-204ENST00000541864 ABCF2Q9UG63 623 aa13.6□□□□□ -0.23
SLC12A4-204ENST00000541864 TRMT112Q9UI30 125 aaKnown RBP13.6□□□□□ -0.23
SLC12A4-204ENST00000541864 KDM4FA0A1W2PPD8 638 aa13.59□□□□□ -0.23
SLC12A4-204ENST00000541864 TOB2Q14106 344 aaPredicted RBP13.59□□□□□ -0.23
SLC12A4-204ENST00000541864 NOL7Q9UMY1 257 aaKnown RBP13.59□□□□□ -0.23
SLC12A4-204ENST00000541864 LUZP1Q86V48 1076 aa13.59□□□□□ -0.23
SLC12A4-204ENST00000541864 ZKSCAN5Q9Y2L8 839 aa13.59□□□□□ -0.23
SLC12A4-204ENST00000541864 CYP21A2P08686 494 aa13.59□□□□□ -0.23
SLC12A4-204ENST00000541864 IFIT5Q13325 482 aaKnown RBP13.59□□□□□ -0.23
SLC12A4-204ENST00000541864 TTC6Q86TZ1 520 aa13.59□□□□□ -0.23
SLC12A4-204ENST00000541864 PDLIM2Q96JY6 352 aa13.59□□□□□ -0.23
SLC12A4-204ENST00000541864 VPS37DQ86XT2 251 aa13.58□□□□□ -0.23
SLC12A4-204ENST00000541864 HAUS7Q99871 368 aa13.58□□□□□ -0.23
SLC12A4-204ENST00000541864 PCDH11XQ9BZA7 1347 aa13.58□□□□□ -0.24
SLC12A4-204ENST00000541864 PCDH11YQ9BZA8 1340 aa13.58□□□□□ -0.24
SLC12A4-204ENST00000541864 USP54Q70EL1 1684 aa13.58□□□□□ -0.24
SLC12A4-204ENST00000541864 IL2RBP14784 551 aa13.58□□□□□ -0.24
SLC12A4-204ENST00000541864 HSP90AA4PQ58FG1 418 aa13.58□□□□□ -0.24
SLC12A4-204ENST00000541864 KBTBD3Q8NAB2 608 aa13.58□□□□□ -0.24
SLC12A4-204ENST00000541864 MST1RQ04912 1400 aa13.58□□□□□ -0.24
SLC12A4-204ENST00000541864 A0A1B0GUL7 405 aa13.58□□□□□ -0.24
SLC12A4-204ENST00000541864 LRP10Q7Z4F1 713 aa13.58□□□□□ -0.24
SLC12A4-204ENST00000541864 NUP133Q8WUM0 1156 aa13.58□□□□□ -0.24
SLC12A4-204ENST00000541864 FOXO4P98177 505 aa13.57□□□□□ -0.24
SLC12A4-204ENST00000541864 RABL6Q3YEC7 729 aaPredicted RBP13.57□□□□□ -0.24
SLC12A4-204ENST00000541864 PI16Q6UXB8 463 aa13.57□□□□□ -0.24
SLC12A4-204ENST00000541864 TMEM87AQ8NBN3 555 aa13.57□□□□□ -0.24
SLC12A4-204ENST00000541864 KCNB2Q92953 911 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms