RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 SPEF2Q9C093 1822 aa13.49□□□□□ -0.25
LGR5-203ENST00000540815 PALLDQ8WX93 1383 aa13.49□□□□□ -0.25
LGR5-203ENST00000540815 ROBO1Q9Y6N7 1651 aa13.49□□□□□ -0.25
LGR5-203ENST00000540815 ZNF710Q8N1W2 664 aa13.49□□□□□ -0.25
LGR5-203ENST00000540815 PLCD3Q8N3E9 789 aa13.49□□□□□ -0.25
LGR5-203ENST00000540815 SLC4A9Q96Q91 983 aa13.49□□□□□ -0.25
LGR5-203ENST00000540815 STX6O43752 255 aa13.48□□□□□ -0.25
LGR5-203ENST00000540815 DMTNQ08495 405 aa13.48□□□□□ -0.25
LGR5-203ENST00000540815 CCDC83Q8IWF9 413 aa13.48□□□□□ -0.25
LGR5-203ENST00000540815 KBTBD3Q8NAB2 608 aa13.48□□□□□ -0.25
LGR5-203ENST00000540815 ZNF594Q96JF6 807 aaPredicted RBP13.48□□□□□ -0.25
LGR5-203ENST00000540815 SYT1P21579 422 aa13.48□□□□□ -0.25
LGR5-203ENST00000540815 RPS6KB1P23443 525 aa13.48□□□□□ -0.25
LGR5-203ENST00000540815 ST3GAL1Q11201 340 aa13.48□□□□□ -0.25
LGR5-203ENST00000540815 ANKRD1Q15327 319 aa13.48□□□□□ -0.25
LGR5-203ENST00000540815 LRRC24Q50LG9 513 aa13.48□□□□□ -0.25
LGR5-203ENST00000540815 KIF6Q6ZMV9 814 aa13.48□□□□□ -0.25
LGR5-203ENST00000540815 ZKSCAN5Q9Y2L8 839 aa13.48□□□□□ -0.25
LGR5-203ENST00000540815 TCHHQ07283 1943 aa13.47□□□□□ -0.25
LGR5-203ENST00000540815 DTNBO60941 627 aa13.47□□□□□ -0.25
LGR5-203ENST00000540815 STARD3NLO95772 234 aa13.47□□□□□ -0.25
LGR5-203ENST00000540815 PTMAP06454 111 aaKnown RBP13.47□□□□□ -0.25
LGR5-203ENST00000540815 ME3Q16798 604 aa13.47□□□□□ -0.25
LGR5-203ENST00000540815 MCMDC2Q4G0Z9 681 aa13.47□□□□□ -0.25
LGR5-203ENST00000540815 PPP4R3BQ5MIZ7 849 aa13.47□□□□□ -0.25
LGR5-203ENST00000540815 BLOC1S2Q6QNY1 142 aa13.47□□□□□ -0.25
LGR5-203ENST00000540815 TMEM87AQ8NBN3 555 aa13.47□□□□□ -0.25
LGR5-203ENST00000540815 TMEM63CQ9P1W3 806 aa13.47□□□□□ -0.25
LGR5-203ENST00000540815 SH3TC1Q8TE82 1336 aa13.47□□□□□ -0.25
LGR5-203ENST00000540815 ZNF500O60304 480 aaPredicted RBP13.47□□□□□ -0.25
LGR5-203ENST00000540815 PCCAP05165 728 aaPredicted RBP13.47□□□□□ -0.25
LGR5-203ENST00000540815 KRT32Q14532 448 aa13.47□□□□□ -0.25
LGR5-203ENST00000540815 NEUROD6Q96NK8 337 aa13.47□□□□□ -0.25
LGR5-203ENST00000540815 CCDC94Q9BW85 323 aaPredicted RBP13.47□□□□□ -0.25
LGR5-203ENST00000540815 PLA2G12BQ9BX93 195 aa13.47□□□□□ -0.25
LGR5-203ENST00000540815 FBXO3Q9UK99 471 aa13.47□□□□□ -0.25
LGR5-203ENST00000540815 U3KPZ7 1027 aaPredicted RBP13.47□□□□□ -0.25
LGR5-203ENST00000540815 AHDC1Q5TGY3 1603 aaPredicted RBP13.47□□□□□ -0.25
LGR5-203ENST00000540815 ANKRD36CQ5JPF3 1778 aa13.46□□□□□ -0.25
LGR5-203ENST00000540815 BCL9O00512 1426 aa13.46□□□□□ -0.25
LGR5-203ENST00000540815 GJB2P29033 226 aa13.46□□□□□ -0.25
LGR5-203ENST00000540815 DDX46Q7L014 1031 aaKnown RBP13.46□□□□□ -0.25
LGR5-203ENST00000540815 MAP7D2Q96T17 732 aa13.46□□□□□ -0.25
LGR5-203ENST00000540815 PUS3Q9BZE2 481 aaKnown RBP13.46□□□□□ -0.25
LGR5-203ENST00000540815 TPCN1Q9ULQ1 816 aa13.46□□□□□ -0.25
LGR5-203ENST00000540815 ZNF330Q9Y3S2 320 aaPredicted RBP13.46□□□□□ -0.25
LGR5-203ENST00000540815 DYNC1I1O14576 645 aa13.46□□□□□ -0.25
LGR5-203ENST00000540815 PAG1Q9NWQ8 432 aa13.46□□□□□ -0.25
LGR5-203ENST00000540815 CCDC9Q9Y3X0 531 aaKnown RBP13.46□□□□□ -0.25
LGR5-203ENST00000540815 MAP3K15Q6ZN16 1313 aa13.45□□□□□ -0.26
LGR5-203ENST00000540815 F13A1P00488 732 aa13.45□□□□□ -0.26
LGR5-203ENST00000540815 TIMM10P62072 90 aa13.45□□□□□ -0.26
LGR5-203ENST00000540815 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.45□□□□□ -0.26
LGR5-203ENST00000540815 SEC62Q99442 399 aaKnown RBP13.45□□□□□ -0.26
LGR5-203ENST00000540815 CCDC57Q2TAC2 916 aa13.45□□□□□ -0.26
LGR5-203ENST00000540815 USP48Q86UV5 1035 aa13.45□□□□□ -0.26
LGR5-203ENST00000540815 HELLSQ9NRZ9 838 aa13.45□□□□□ -0.26
LGR5-203ENST00000540815 ATP6V1DQ9Y5K8 247 aa13.45□□□□□ -0.26
LGR5-203ENST00000540815 A0A1B0GUL7 405 aa13.45□□□□□ -0.26
LGR5-203ENST00000540815 PDIA4P13667 645 aaKnown RBP13.45□□□□□ -0.26
LGR5-203ENST00000540815 SLFNL1Q499Z3 407 aa13.45□□□□□ -0.26
LGR5-203ENST00000540815 SASS6Q6UVJ0 657 aa13.45□□□□□ -0.26
LGR5-203ENST00000540815 LRSAM1Q6UWE0 723 aa13.45□□□□□ -0.26
LGR5-203ENST00000540815 CCDC129Q6ZRS4 1044 aa13.45□□□□□ -0.26
LGR5-203ENST00000540815 ZBTB38Q8NAP3 1195 aaPredicted RBP13.45□□□□□ -0.26
LGR5-203ENST00000540815 GOLIM4O00461 696 aa13.44□□□□□ -0.26
LGR5-203ENST00000540815 GIGYF2Q6Y7W6 1299 aaKnown RBP13.44□□□□□ -0.26
LGR5-203ENST00000540815 SYNE4Q8N205 404 aa13.44□□□□□ -0.26
LGR5-203ENST00000540815 MTMR6Q9Y217 621 aa13.44□□□□□ -0.26
LGR5-203ENST00000540815 KAT6BQ8WYB5 2073 aa13.44□□□□□ -0.26
LGR5-203ENST00000540815 CDHR2Q9BYE9 1310 aa13.44□□□□□ -0.26
LGR5-203ENST00000540815 CSF1RP07333 972 aa13.44□□□□□ -0.26
LGR5-203ENST00000540815 TOB2Q14106 344 aaPredicted RBP13.44□□□□□ -0.26
LGR5-203ENST00000540815 HLFQ16534 295 aa13.44□□□□□ -0.26
LGR5-203ENST00000540815 SYAP1Q96A49 352 aaPredicted RBP13.44□□□□□ -0.26
LGR5-203ENST00000540815 FAM89AQ96GI7 184 aa13.44□□□□□ -0.26
LGR5-203ENST00000540815 CEP126Q9P2H0 1117 aa13.44□□□□□ -0.26
LGR5-203ENST00000540815 NECAB1Q8N987 351 aa13.43□□□□□ -0.26
LGR5-203ENST00000540815 TTC12Q9H892 705 aaPredicted RBP13.43□□□□□ -0.26
LGR5-203ENST00000540815 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.43□□□□□ -0.26
LGR5-203ENST00000540815 MYH3P11055 1940 aa13.43□□□□□ -0.26
LGR5-203ENST00000540815 IFIT1P09914 478 aaKnown RBP13.43□□□□□ -0.26
LGR5-203ENST00000540815 CYP19A1P11511 503 aaPredicted RBP13.43□□□□□ -0.26
LGR5-203ENST00000540815 HSP90AB3PQ58FF7 597 aa13.43□□□□□ -0.26
LGR5-203ENST00000540815 ZMYM1Q5SVZ6 1142 aa13.43□□□□□ -0.26
LGR5-203ENST00000540815 TCEANC2Q96MN5 208 aa13.43□□□□□ -0.26
LGR5-203ENST00000540815 NEK1Q96PY6 1258 aa13.43□□□□□ -0.26
LGR5-203ENST00000540815 GDPD2Q9HCC8 539 aa13.43□□□□□ -0.26
LGR5-203ENST00000540815 AKAP2Q9Y2D5 859 aa13.43□□□□□ -0.26
LGR5-203ENST00000540815 LAMA4Q16363 1823 aa13.43□□□□□ -0.26
LGR5-203ENST00000540815 EXOC5O00471 708 aa13.42□□□□□ -0.26
LGR5-203ENST00000540815 GADD45BO75293 160 aaPredicted RBP13.42□□□□□ -0.26
LGR5-203ENST00000540815 PDLIM2Q96JY6 352 aa13.42□□□□□ -0.26
LGR5-203ENST00000540815 CNPY2Q9Y2B0 182 aa13.42□□□□□ -0.26
LGR5-203ENST00000540815 NUP98P52948 1817 aa13.42□□□□□ -0.26
LGR5-203ENST00000540815 PLCB2Q00722 1185 aa13.42□□□□□ -0.26
LGR5-203ENST00000540815 CCDC85AQ96PX6 553 aaPredicted RBP13.42□□□□□ -0.26
LGR5-203ENST00000540815 DSCC1Q9BVC3 393 aa13.42□□□□□ -0.26
LGR5-203ENST00000540815 DOT1LQ8TEK3 1739 aa13.42□□□□□ -0.26
LGR5-203ENST00000540815 CYP21A2P08686 494 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms