RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 GNAT3A8MTJ3 354 aa11.74□□□□□ -0.53
TRAPPC1-202ENST00000540486 BBOX1O75936 387 aa11.74□□□□□ -0.53
TRAPPC1-202ENST00000540486 SNRPA1P09661 255 aaKnown RBP11.74□□□□□ -0.53
TRAPPC1-202ENST00000540486 SP8Q8IXZ3 490 aa11.74□□□□□ -0.53
TRAPPC1-202ENST00000540486 MPNDQ8N594 471 aa11.74□□□□□ -0.53
TRAPPC1-202ENST00000540486 CDCA5Q96FF9 252 aa11.74□□□□□ -0.53
TRAPPC1-202ENST00000540486 TAOK2Q9UL54 1235 aa11.74□□□□□ -0.53
TRAPPC1-202ENST00000540486 TRIM17Q9Y577 477 aa11.74□□□□□ -0.53
TRAPPC1-202ENST00000540486 ERVV-1B6SEH8 477 aa11.73□□□□□ -0.53
TRAPPC1-202ENST00000540486 TIE1P35590 1138 aa11.73□□□□□ -0.53
TRAPPC1-202ENST00000540486 SREBF2Q12772 1141 aa11.73□□□□□ -0.53
TRAPPC1-202ENST00000540486 SLC51AQ86UW1 340 aa11.73□□□□□ -0.53
TRAPPC1-202ENST00000540486 ARMC5Q96C12 935 aa11.73□□□□□ -0.53
TRAPPC1-202ENST00000540486 NLRP3Q96P20 1036 aa11.73□□□□□ -0.53
TRAPPC1-202ENST00000540486 TMEM106CQ9BVX2 250 aa11.73□□□□□ -0.53
TRAPPC1-202ENST00000540486 PITPNM2Q9BZ72 1349 aa11.73□□□□□ -0.53
TRAPPC1-202ENST00000540486 IBTKQ9P2D0 1353 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC1-202ENST00000540486 NBPF26B4DH59 902 aa11.72□□□□□ -0.53
TRAPPC1-202ENST00000540486 H0YGN5 161 aa11.72□□□□□ -0.53
TRAPPC1-202ENST00000540486 PSMD14O00487 310 aa11.72□□□□□ -0.53
TRAPPC1-202ENST00000540486 KCNQ3O43525 872 aa11.72□□□□□ -0.53
TRAPPC1-202ENST00000540486 ALDH1A1P00352 501 aa11.72□□□□□ -0.53
TRAPPC1-202ENST00000540486 EGFRP00533 1210 aa11.72□□□□□ -0.53
TRAPPC1-202ENST00000540486 PDAP1Q13442 181 aaKnown RBP11.72□□□□□ -0.53
TRAPPC1-202ENST00000540486 RALBP1Q15311 655 aa11.72□□□□□ -0.53
TRAPPC1-202ENST00000540486 RBM26Q5T8P6 1007 aaKnown RBP11.72□□□□□ -0.53
TRAPPC1-202ENST00000540486 NBPF10Q6P3W6 841 aaKnown RBP11.72□□□□□ -0.53
TRAPPC1-202ENST00000540486 OTOP1Q7RTM1 612 aa11.72□□□□□ -0.53
TRAPPC1-202ENST00000540486 GAS2L2Q8NHY3 880 aa11.72□□□□□ -0.53
TRAPPC1-202ENST00000540486 TRPC6Q9Y210 931 aa11.72□□□□□ -0.53
TRAPPC1-202ENST00000540486 CEP290O15078 2479 aa11.71□□□□□ -0.53
TRAPPC1-202ENST00000540486 COL3A1P02461 1466 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC1-202ENST00000540486 GGA3Q9NZ52 723 aa11.71□□□□□ -0.53
TRAPPC1-202ENST00000540486 PTPN22Q9Y2R2 807 aa11.71□□□□□ -0.53
TRAPPC1-202ENST00000540486 COL6A3P12111 3177 aa11.7□□□□□ -0.54
TRAPPC1-202ENST00000540486 U2SURPO15042 1029 aaKnown RBP11.7□□□□□ -0.54
TRAPPC1-202ENST00000540486 KIF4BQ2VIQ3 1234 aa11.7□□□□□ -0.54
TRAPPC1-202ENST00000540486 R3HDMLQ9H3Y0 253 aa11.7□□□□□ -0.54
TRAPPC1-202ENST00000540486 PRKRIP1Q9H875 184 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC1-202ENST00000540486 RBM27Q9P2N5 1060 aaKnown RBP11.7□□□□□ -0.54
TRAPPC1-202ENST00000540486 HTTP42858 3142 aa11.7□□□□□ -0.54
TRAPPC1-202ENST00000540486 CEMIPQ8WUJ3 1361 aa11.69□□□□□ -0.54
TRAPPC1-202ENST00000540486 POLR2AP24928 1970 aaKnown RBP11.69□□□□□ -0.54
TRAPPC1-202ENST00000540486 PSEN1P49768 467 aa11.69□□□□□ -0.54
TRAPPC1-202ENST00000540486 SLC10A5Q5PT55 438 aa11.69□□□□□ -0.54
TRAPPC1-202ENST00000540486 SUSD4Q5VX71 490 aa11.69□□□□□ -0.54
TRAPPC1-202ENST00000540486 PPP1R42Q7Z4L9 355 aa11.69□□□□□ -0.54
TRAPPC1-202ENST00000540486 NECTIN2Q92692 538 aa11.69□□□□□ -0.54
TRAPPC1-202ENST00000540486 CFAP53Q96M91 514 aa11.69□□□□□ -0.54
TRAPPC1-202ENST00000540486 CENPFP49454 3210 aa11.68□□□□□ -0.54
TRAPPC1-202ENST00000540486 ABCC4O15439 1325 aa11.68□□□□□ -0.54
TRAPPC1-202ENST00000540486 BRCA2P51587 3418 aa11.68□□□□□ -0.54
TRAPPC1-202ENST00000540486 UBE2Q2LH0YL09 131 aa11.68□□□□□ -0.54
TRAPPC1-202ENST00000540486 INHBEP58166 350 aa11.68□□□□□ -0.54
TRAPPC1-202ENST00000540486 WASHC4Q2M389 1173 aa11.68□□□□□ -0.54
TRAPPC1-202ENST00000540486 C3orf67Q6ZVT6 689 aa11.68□□□□□ -0.54
TRAPPC1-202ENST00000540486 TMC4Q7Z404 712 aa11.68□□□□□ -0.54
TRAPPC1-202ENST00000540486 ERO1AQ96HE7 468 aa11.68□□□□□ -0.54
TRAPPC1-202ENST00000540486 RANBP2P49792 3224 aaKnown RBP11.67□□□□□ -0.54
TRAPPC1-202ENST00000540486 RBBP6Q7Z6E9 1792 aaKnown RBP11.67□□□□□ -0.54
TRAPPC1-202ENST00000540486 MAP3K15Q6ZN16 1313 aa11.67□□□□□ -0.54
TRAPPC1-202ENST00000540486 NTSR2O95665 410 aa11.67□□□□□ -0.54
TRAPPC1-202ENST00000540486 ASTLQ6HA08 431 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC1-202ENST00000540486 NBPF11Q86T75 865 aa11.67□□□□□ -0.54
TRAPPC1-202ENST00000540486 ZNF34Q8IZ26 560 aa11.67□□□□□ -0.54
TRAPPC1-202ENST00000540486 BMP2KQ9NSY1 1161 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC1-202ENST00000540486 PAPPA2Q9BXP8 1791 aa11.67□□□□□ -0.54
TRAPPC1-202ENST00000540486 UBN2Q6ZU65 1347 aa11.66□□□□□ -0.54
TRAPPC1-202ENST00000540486 U2AF1L5P0DN76 240 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC1-202ENST00000540486 GPTP24298 496 aa11.66□□□□□ -0.54
TRAPPC1-202ENST00000540486 U2AF1Q01081 240 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRAPPC1-202ENST00000540486 TCIRG1Q13488 830 aa11.66□□□□□ -0.54
TRAPPC1-202ENST00000540486 SCARF1Q14162 830 aa11.66□□□□□ -0.54
TRAPPC1-202ENST00000540486 PARP10Q53GL7 1025 aa11.66□□□□□ -0.54
TRAPPC1-202ENST00000540486 ANGEL2Q5VTE6 544 aaKnown RBP11.66□□□□□ -0.54
TRAPPC1-202ENST00000540486 KIF6Q6ZMV9 814 aa11.66□□□□□ -0.54
TRAPPC1-202ENST00000540486 ZNF333Q96JL9 665 aa11.66□□□□□ -0.54
TRAPPC1-202ENST00000540486 PHACTR3Q96KR7 559 aa11.66□□□□□ -0.54
TRAPPC1-202ENST00000540486 RSPH6AQ9H0K4 717 aa11.66□□□□□ -0.54
TRAPPC1-202ENST00000540486 NUDCQ9Y266 331 aa11.66□□□□□ -0.54
TRAPPC1-202ENST00000540486 MYBBP1AQ9BQG0 1328 aaKnown RBP11.65□□□□□ -0.54
TRAPPC1-202ENST00000540486 A0A1W2PPC1 479 aa11.65□□□□□ -0.54
TRAPPC1-202ENST00000540486 TTLL13PA6NNM8 815 aa11.65□□□□□ -0.54
TRAPPC1-202ENST00000540486 VIL1P09327 827 aaKnown RBP11.65□□□□□ -0.54
TRAPPC1-202ENST00000540486 MOB2Q70IA6 237 aa11.65□□□□□ -0.54
TRAPPC1-202ENST00000540486 DDX46Q7L014 1031 aaKnown RBP11.65□□□□□ -0.54
TRAPPC1-202ENST00000540486 DCBLD2Q96PD2 775 aa11.65□□□□□ -0.54
TRAPPC1-202ENST00000540486 DBNDD1Q9H9R9 158 aa11.65□□□□□ -0.54
TRAPPC1-202ENST00000540486 EFCC1Q9HA90 598 aa11.65□□□□□ -0.54
TRAPPC1-202ENST00000540486 ASTN2O75129 1339 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC1-202ENST00000540486 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC1-202ENST00000540486 ATMINO43313 823 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC1-202ENST00000540486 PRKAR2BP31323 418 aa11.64□□□□□ -0.55
TRAPPC1-202ENST00000540486 NF2P35240 595 aa11.64□□□□□ -0.55
TRAPPC1-202ENST00000540486 ZNF280AP59817 542 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC1-202ENST00000540486 MKRN3Q13064 507 aaKnown RBP11.64□□□□□ -0.55
TRAPPC1-202ENST00000540486 GRAPQ13588 217 aa11.64□□□□□ -0.55
TRAPPC1-202ENST00000540486 TTLL12Q14166 644 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC1-202ENST00000540486 SLC4A8Q2Y0W8 1093 aa11.64□□□□□ -0.55
TRAPPC1-202ENST00000540486 GRAPLQ8TC17 118 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms