RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 RBM8AQ9Y5S9 174 aaKnown RBP7.41□□□□□ -1.22
LSAMP-207ENST00000539563 ASXL2Q76L83 1435 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 IGHDP01880 384 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 HLTFQ14527 1009 aaKnown RBP eCLIP7.41□□□□□ -1.22
LSAMP-207ENST00000539563 TMEM87AQ8NBN3 555 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 SNX21Q969T3 373 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 TRMT1Q9NXH9 659 aaKnown RBP7.41□□□□□ -1.22
LSAMP-207ENST00000539563 FAM83GA6ND36 823 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 IDEP14735 1019 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 PRPHP41219 470 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 CEBPAP49715 358 aaPredicted RBP7.41□□□□□ -1.22
LSAMP-207ENST00000539563 TUBB4BP68371 445 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 NAA16Q6N069 864 aaPredicted RBP7.41□□□□□ -1.22
LSAMP-207ENST00000539563 ZNF804AQ7Z570 1209 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 POLR3AO14802 1390 aaPredicted RBP7.41□□□□□ -1.22
LSAMP-207ENST00000539563 XAGE3Q8WTP9 111 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 TRIM47Q96LD4 638 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 ABCC10Q5T3U5 1492 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 MYO5CQ9NQX4 1742 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 MAGEB6P1A0A0J9YX57 407 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 PLCG2P16885 1265 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 IBSPP21815 317 aaPredicted RBP7.41□□□□□ -1.22
LSAMP-207ENST00000539563 PDE1AP54750 535 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 CEP135Q66GS9 1140 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 SNRKQ9NRH2 765 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 ATP6V1AP38606 617 aa7.4□□□□□ -1.22
LSAMP-207ENST00000539563 FSD2A1L4K1 749 aa7.4□□□□□ -1.22
LSAMP-207ENST00000539563 B4DLN1 442 aa7.4□□□□□ -1.22
LSAMP-207ENST00000539563 MRPL12P52815 198 aaKnown RBP7.4□□□□□ -1.22
LSAMP-207ENST00000539563 SPAG1Q07617 926 aa7.4□□□□□ -1.22
LSAMP-207ENST00000539563 LARP6Q9BRS8 491 aaKnown RBP7.4□□□□□ -1.22
LSAMP-207ENST00000539563 BIN1O00499 593 aa7.4□□□□□ -1.22
LSAMP-207ENST00000539563 CHMP4BP1P59074 171 aa7.4□□□□□ -1.22
LSAMP-207ENST00000539563 ZSCAN23Q3MJ62 389 aa7.4□□□□□ -1.22
LSAMP-207ENST00000539563 COPS6Q7L5N1 327 aa7.4□□□□□ -1.22
LSAMP-207ENST00000539563 MEIS3Q99687 375 aa7.4□□□□□ -1.22
LSAMP-207ENST00000539563 UTP14AQ9BVJ6 771 aaKnown RBP7.4□□□□□ -1.22
LSAMP-207ENST00000539563 ADAMTS12P58397 1594 aa7.4□□□□□ -1.22
LSAMP-207ENST00000539563 ARHGEF12Q9NZN5 1544 aa7.4□□□□□ -1.22
LSAMP-207ENST00000539563 CTR9Q6PD62 1173 aa7.4□□□□□ -1.22
LSAMP-207ENST00000539563 Q6ZUG5 572 aa7.4□□□□□ -1.22
LSAMP-207ENST00000539563 STX8Q9UNK0 236 aa7.4□□□□□ -1.22
LSAMP-207ENST00000539563 BICD1Q96G01 975 aa7.4□□□□□ -1.23
LSAMP-207ENST00000539563 PRIMPOLQ96LW4 560 aa7.4□□□□□ -1.23
LSAMP-207ENST00000539563 N4BP3O15049 544 aa7.4□□□□□ -1.23
LSAMP-207ENST00000539563 CALCOCO1Q9P1Z2 691 aa7.4□□□□□ -1.23
LSAMP-207ENST00000539563 MAP3K5Q99683 1374 aa7.4□□□□□ -1.23
LSAMP-207ENST00000539563 HSF2BPO75031 334 aa7.4□□□□□ -1.23
LSAMP-207ENST00000539563 PAG1Q9NWQ8 432 aa7.4□□□□□ -1.23
LSAMP-207ENST00000539563 MAST1Q9Y2H9 1570 aa7.4□□□□□ -1.23
LSAMP-207ENST00000539563 FLT4P35916 1363 aa7.4□□□□□ -1.23
LSAMP-207ENST00000539563 WDR62O43379 1518 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 TCOF1Q13428 1488 aaKnown RBP7.39□□□□□ -1.23
LSAMP-207ENST00000539563 CCDC175P0C221 793 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 KRT13P13646 458 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 OGFOD1Q8N543 542 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 SHANK2Q9UPX8 1470 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 TUBB4AP04350 444 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 CCDC155Q8N6L0 562 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 PPM1EQ8WY54 764 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 TSNARE1Q96NA8 513 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 GDPD2Q9HCC8 539 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 PIK3C2GO75747 1445 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 ERICH4A6NGS2 130 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 PSMA7O14818 248 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 TOM1O60784 492 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 SREK1Q8WXA9 508 aaKnown RBP7.39□□□□□ -1.23
LSAMP-207ENST00000539563 C16orf45Q96MC5 204 aaPredicted RBP7.39□□□□□ -1.23
LSAMP-207ENST00000539563 NPATQ14207 1427 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 KRT2P35908 639 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 PRPF4BQ13523 1007 aaKnown RBP7.39□□□□□ -1.23
LSAMP-207ENST00000539563 ATL3Q6DD88 541 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 PLXNC1O60486 1568 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 ACTN2P35609 894 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 ISM2Q6H9L7 571 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 HEATR3Q7Z4Q2 680 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 JADE2Q9NQC1 790 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 RBM28Q9NW13 759 aaKnown RBP7.39□□□□□ -1.23
LSAMP-207ENST00000539563 FMNL3Q8IVF7 1028 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 LMAN1P49257 510 aa7.39□□□□□ -1.23
LSAMP-207ENST00000539563 DYNC1I1O14576 645 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 LIG1P18858 919 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 BMS1Q14692 1282 aaKnown RBP7.38□□□□□ -1.23
LSAMP-207ENST00000539563 SPECC1LQ69YQ0 1117 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 C6orf50Q9HD87 102 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 PUF60Q9UHX1 559 aaKnown RBP7.38□□□□□ -1.23
LSAMP-207ENST00000539563 NIP7Q9Y221 180 aaKnown RBP eCLIP7.38□□□□□ -1.23
LSAMP-207ENST00000539563 BICDL2A1A5D9 508 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 EIF4A2Q14240 407 aaKnown RBP7.38□□□□□ -1.23
LSAMP-207ENST00000539563 KIAA0753Q2KHM9 967 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 RRP36Q96EU6 259 aaKnown RBP7.38□□□□□ -1.23
LSAMP-207ENST00000539563 ANKRD2Q9GZV1 360 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 HOMER2Q9NSB8 354 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 MRPS27Q92552 414 aaKnown RBP7.38□□□□□ -1.23
LSAMP-207ENST00000539563 MACROD2A1Z1Q3 448 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 CHRNA2Q15822 529 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 ANO6Q4KMQ2 910 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 ZNF219Q9P2Y4 722 aaPredicted RBP7.38□□□□□ -1.23
LSAMP-207ENST00000539563 PARD3Q8TEW0 1356 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 LINS1Q8NG48 757 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms