RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 SMG9Q9H0W8 520 aaKnown RBP9.09□□□□□ -0.95
SSPN-206ENST00000539019 K7ELQ4 463 aaPredicted RBP9.08□□□□□ -0.96
SSPN-206ENST00000539019 EIF2AK2P19525 551 aaKnown RBP9.08□□□□□ -0.96
SSPN-206ENST00000539019 RAC1P63000 192 aa9.08□□□□□ -0.96
SSPN-206ENST00000539019 ABTB2Q8N961 1025 aa9.08□□□□□ -0.96
SSPN-206ENST00000539019 NACC1Q96RE7 527 aa9.08□□□□□ -0.96
SSPN-206ENST00000539019 CCDC88BA6NC98 1476 aa9.07□□□□□ -0.96
SSPN-206ENST00000539019 NSUN5Q96P11 429 aaKnown RBP9.07□□□□□ -0.96
SSPN-206ENST00000539019 LOC100996750A0A140TA64 210 aa9.06□□□□□ -0.96
SSPN-206ENST00000539019 CARNS1A5YM72 827 aa9.06□□□□□ -0.96
SSPN-206ENST00000539019 ELNP15502 786 aa9.06□□□□□ -0.96
SSPN-206ENST00000539019 SELPP16109 830 aa9.06□□□□□ -0.96
SSPN-206ENST00000539019 SSFA2P28290 1259 aa9.06□□□□□ -0.96
SSPN-206ENST00000539019 SOX18P35713 384 aa9.06□□□□□ -0.96
SSPN-206ENST00000539019 KRTAP4-6Q9BYQ5 205 aa9.06□□□□□ -0.96
SSPN-206ENST00000539019 C9orf172C9J069 976 aa9.05□□□□□ -0.96
SSPN-206ENST00000539019 HOXD8P13378 290 aaPredicted RBP9.05□□□□□ -0.96
SSPN-206ENST00000539019 SHISA2Q6UWI4 295 aa9.05□□□□□ -0.96
SSPN-206ENST00000539019 ATCAYQ86WG3 371 aa9.05□□□□□ -0.96
SSPN-206ENST00000539019 FMR1NBQ8N0W7 255 aaPredicted RBP9.05□□□□□ -0.96
SSPN-206ENST00000539019 PLD4Q96BZ4 506 aa9.05□□□□□ -0.96
SSPN-206ENST00000539019 FNDC3AQ9Y2H6 1198 aaKnown RBP9.05□□□□□ -0.96
SSPN-206ENST00000539019 GHRHP01286 108 aa9.04□□□□□ -0.96
SSPN-206ENST00000539019 WFDC8Q8IUA0 241 aa9.04□□□□□ -0.96
SSPN-206ENST00000539019 OR13H1Q8NG92 308 aa9.04□□□□□ -0.96
SSPN-206ENST00000539019 CADPSQ9ULU8 1353 aa9.04□□□□□ -0.96
SSPN-206ENST00000539019 NESP48681 1621 aa9.04□□□□□ -0.96
SSPN-206ENST00000539019 CFTRP13569 1480 aa9.03□□□□□ -0.96
SSPN-206ENST00000539019 SUPT5HO00267 1087 aaKnown RBP9.03□□□□□ -0.96
SSPN-206ENST00000539019 HELQQ8TDG4 1101 aa9.03□□□□□ -0.96
SSPN-206ENST00000539019 GTF3C2Q8WUA4 911 aaPredicted RBP9.03□□□□□ -0.96
SSPN-206ENST00000539019 LENG1Q96BZ8 264 aaPredicted RBP9.03□□□□□ -0.96
SSPN-206ENST00000539019 COL13A1Q5TAT6 717 aaPredicted RBP9.02□□□□□ -0.97
SSPN-206ENST00000539019 TTC39BQ5VTQ0 682 aaPredicted RBP9.02□□□□□ -0.97
SSPN-206ENST00000539019 NUDT16Q96DE0 195 aaKnown RBP9.02□□□□□ -0.97
SSPN-206ENST00000539019 TPSG1Q9NRR2 321 aa9.02□□□□□ -0.97
SSPN-206ENST00000539019 ADGRE1Q14246 886 aa9.01□□□□□ -0.97
SSPN-206ENST00000539019 GDF6Q6KF10 455 aaPredicted RBP9.01□□□□□ -0.97
SSPN-206ENST00000539019 PHLDB3Q6NSJ2 640 aa9.01□□□□□ -0.97
SSPN-206ENST00000539019 FBXO11Q86XK2 927 aa9.01□□□□□ -0.97
SSPN-206ENST00000539019 DTWD1Q8N5C7 304 aa9.01□□□□□ -0.97
SSPN-206ENST00000539019 RBSNQ9H1K0 784 aa9.01□□□□□ -0.97
SSPN-206ENST00000539019 MBTPS1Q14703 1052 aa9□□□□□ -0.97
SSPN-206ENST00000539019 NOM1Q5C9Z4 860 aaKnown RBP9□□□□□ -0.97
SSPN-206ENST00000539019 EDEM1Q92611 657 aa9□□□□□ -0.97
SSPN-206ENST00000539019 SEMA6BQ9H3T3 888 aa9□□□□□ -0.97
SSPN-206ENST00000539019 MPSTP25325 297 aa8.99□□□□□ -0.97
SSPN-206ENST00000539019 NRG1Q02297 640 aaPredicted RBP8.99□□□□□ -0.97
SSPN-206ENST00000539019 HYAL2Q12891 473 aa8.99□□□□□ -0.97
SSPN-206ENST00000539019 MTMR3Q13615 1198 aa8.99□□□□□ -0.97
SSPN-206ENST00000539019 IL22RA1Q8N6P7 574 aa8.99□□□□□ -0.97
SSPN-206ENST00000539019 ELP3Q9H9T3 547 aa8.99□□□□□ -0.97
SSPN-206ENST00000539019 ABI2Q9NYB9 513 aaPredicted RBP8.99□□□□□ -0.97
SSPN-206ENST00000539019 DEAF1O75398 565 aaPredicted RBP8.99□□□□□ -0.97
SSPN-206ENST00000539019 CYP2E1P05181 493 aaPredicted RBP8.99□□□□□ -0.97
SSPN-206ENST00000539019 DNM1Q05193 864 aaKnown RBP8.99□□□□□ -0.97
SSPN-206ENST00000539019 RSPO4Q2I0M5 234 aaPredicted RBP8.99□□□□□ -0.97
SSPN-206ENST00000539019 GGNBP2Q9H3C7 697 aa8.99□□□□□ -0.97
SSPN-206ENST00000539019 TMEM63CQ9P1W3 806 aa8.99□□□□□ -0.97
SSPN-206ENST00000539019 USP21Q9UK80 565 aa8.99□□□□□ -0.97
SSPN-206ENST00000539019 TRIM33Q9UPN9 1127 aa8.99□□□□□ -0.97
SSPN-206ENST00000539019 EIF1AXP47813 144 aaKnown RBP8.98□□□□□ -0.97
SSPN-206ENST00000539019 NKAPLQ5M9Q1 402 aa8.98□□□□□ -0.97
SSPN-206ENST00000539019 PDE12Q6L8Q7 609 aaKnown RBP8.98□□□□□ -0.97
SSPN-206ENST00000539019 TXNRD3Q86VQ6 643 aa8.98□□□□□ -0.97
SSPN-206ENST00000539019 PDGFAP04085 211 aa8.97□□□□□ -0.97
SSPN-206ENST00000539019 ITGB7P26010 798 aa8.97□□□□□ -0.97
SSPN-206ENST00000539019 ATP11AP98196 1134 aa8.97□□□□□ -0.97
SSPN-206ENST00000539019 ZNF438Q7Z4V0 828 aa8.97□□□□□ -0.97
SSPN-206ENST00000539019 SPACA7Q96KW9 195 aa8.97□□□□□ -0.97
SSPN-206ENST00000539019 CNTN3Q9P232 1028 aa8.97□□□□□ -0.97
SSPN-206ENST00000539019 A6NHS1 94 aa8.96□□□□□ -0.98
SSPN-206ENST00000539019 KIF4AO95239 1232 aa8.96□□□□□ -0.98
SSPN-206ENST00000539019 RPLP1P05386 114 aaKnown RBP8.96□□□□□ -0.98
SSPN-206ENST00000539019 IGF2-ASQ6U949 168 aa8.96□□□□□ -0.98
SSPN-206ENST00000539019 XKR5Q6UX68 686 aa8.96□□□□□ -0.98
SSPN-206ENST00000539019 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.96□□□□□ -0.98
SSPN-206ENST00000539019 PCSK2P16519 638 aa8.95□□□□□ -0.98
SSPN-206ENST00000539019 NPR3P17342 541 aa8.95□□□□□ -0.98
SSPN-206ENST00000539019 MZF1P28698 734 aaPredicted RBP8.95□□□□□ -0.98
SSPN-206ENST00000539019 CEP135Q66GS9 1140 aa8.95□□□□□ -0.98
SSPN-206ENST00000539019 ARID3AQ99856 593 aa8.95□□□□□ -0.98
SSPN-206ENST00000539019 RASSF4Q9H2L5 321 aa8.95□□□□□ -0.98
SSPN-206ENST00000539019 LAMC3Q9Y6N6 1575 aa8.95□□□□□ -0.98
SSPN-206ENST00000539019 DLL1O00548 723 aa8.94□□□□□ -0.98
SSPN-206ENST00000539019 C8orf34Q49A92 452 aa8.94□□□□□ -0.98
SSPN-206ENST00000539019 ALKBH2Q6NS38 261 aa8.94□□□□□ -0.98
SSPN-206ENST00000539019 NCAPG2Q86XI2 1143 aa8.94□□□□□ -0.98
SSPN-206ENST00000539019 CEP120Q8N960 986 aa8.94□□□□□ -0.98
SSPN-206ENST00000539019 POLIQ9UNA4 740 aa8.94□□□□□ -0.98
SSPN-206ENST00000539019 AAMPQ13685 434 aa8.93□□□□□ -0.98
SSPN-206ENST00000539019 SETDB1Q15047 1291 aa8.93□□□□□ -0.98
SSPN-206ENST00000539019 ADAMTSL4Q6UY14 1074 aa8.93□□□□□ -0.98
SSPN-206ENST00000539019 CACTIN-AS1Q8N1I8 211 aa8.93□□□□□ -0.98
SSPN-206ENST00000539019 C1orf127Q8N9H9 656 aa8.93□□□□□ -0.98
SSPN-206ENST00000539019 TTC16Q8NEE8 873 aa8.93□□□□□ -0.98
SSPN-206ENST00000539019 WFDC12Q8WWY7 111 aa8.93□□□□□ -0.98
SSPN-206ENST00000539019 LACRTQ9GZZ8 138 aa8.93□□□□□ -0.98
SSPN-206ENST00000539019 ANO2Q9NQ90 1003 aa8.93□□□□□ -0.98
SSPN-206ENST00000539019 KANSL3Q9P2N6 904 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms