RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 SF3B3Q15393 1217 aaKnown RBP13.1□□□□□ -0.31
TNFRSF1A-211ENST00000538363 AACSQ86V21 672 aa13.1□□□□□ -0.31
TNFRSF1A-211ENST00000538363 BRIP1Q9BX63 1249 aa13.1□□□□□ -0.31
TNFRSF1A-211ENST00000538363 FBXO3Q9UK99 471 aa13.1□□□□□ -0.31
TNFRSF1A-211ENST00000538363 AKAP2Q9Y2D5 859 aa13.1□□□□□ -0.31
TNFRSF1A-211ENST00000538363 CIAO1O76071 339 aa13.09□□□□□ -0.31
TNFRSF1A-211ENST00000538363 KCNJ4P48050 445 aa13.09□□□□□ -0.31
TNFRSF1A-211ENST00000538363 RFX5P48382 616 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-211ENST00000538363 TFCP2Q12800 502 aa13.09□□□□□ -0.31
TNFRSF1A-211ENST00000538363 SPDYE1Q8NFV5 336 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-211ENST00000538363 ZNF622Q969S3 477 aaKnown RBP eCLIP13.09□□□□□ -0.31
TNFRSF1A-211ENST00000538363 SEC31BQ9NQW1 1179 aa13.09□□□□□ -0.31
TNFRSF1A-211ENST00000538363 PPP1R1BQ9UD71 204 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-211ENST00000538363 ABCC12Q96J65 1359 aa13.08□□□□□ -0.31
TNFRSF1A-211ENST00000538363 CACNA1SQ13698 1873 aa13.08□□□□□ -0.32
TNFRSF1A-211ENST00000538363 ANKRD31Q8N7Z5 1873 aa13.08□□□□□ -0.32
TNFRSF1A-211ENST00000538363 DDX60Q8IY21 1712 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1A-211ENST00000538363 NRXN2Q9P2S2 1712 aa13.08□□□□□ -0.32
TNFRSF1A-211ENST00000538363 H0YIN7 160 aa13.08□□□□□ -0.32
TNFRSF1A-211ENST00000538363 RPS8P62241 208 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1A-211ENST00000538363 C2CD5Q86YS7 1000 aa13.08□□□□□ -0.32
TNFRSF1A-211ENST00000538363 MTFR1LQ9H019 292 aa13.08□□□□□ -0.32
TNFRSF1A-211ENST00000538363 CLEC11AQ9Y240 323 aa13.08□□□□□ -0.32
TNFRSF1A-211ENST00000538363 MROH5Q6ZUA9 1318 aa13.08□□□□□ -0.32
TNFRSF1A-211ENST00000538363 COL11A2P13942 1736 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF1A-211ENST00000538363 ALDH1B1P30837 517 aa13.07□□□□□ -0.32
TNFRSF1A-211ENST00000538363 LRRC24Q50LG9 513 aa13.07□□□□□ -0.32
TNFRSF1A-211ENST00000538363 C16orf71Q8IYS4 520 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF1A-211ENST00000538363 PUS3Q9BZE2 481 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1A-211ENST00000538363 ERC2O15083 957 aa13.06□□□□□ -0.32
TNFRSF1A-211ENST00000538363 NPR1P16066 1061 aa13.06□□□□□ -0.32
TNFRSF1A-211ENST00000538363 GRAPQ13588 217 aa13.06□□□□□ -0.32
TNFRSF1A-211ENST00000538363 C3orf67Q6ZVT6 689 aa13.06□□□□□ -0.32
TNFRSF1A-211ENST00000538363 SKAP1Q86WV1 359 aa13.06□□□□□ -0.32
TNFRSF1A-211ENST00000538363 GRAPLQ8TC17 118 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-211ENST00000538363 ANKRD2Q9GZV1 360 aa13.06□□□□□ -0.32
TNFRSF1A-211ENST00000538363 CCDC8Q9H0W5 538 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-211ENST00000538363 RTL9Q8NET4 1388 aa13.06□□□□□ -0.32
TNFRSF1A-211ENST00000538363 SASH1O94885 1247 aa13.05□□□□□ -0.32
TNFRSF1A-211ENST00000538363 SLC5A1P13866 664 aa13.05□□□□□ -0.32
TNFRSF1A-211ENST00000538363 MX1P20591 662 aa13.05□□□□□ -0.32
TNFRSF1A-211ENST00000538363 HELBQ8NG08 1087 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1A-211ENST00000538363 MASTLQ96GX5 879 aa13.05□□□□□ -0.32
TNFRSF1A-211ENST00000538363 ANKIB1Q9P2G1 1089 aa13.05□□□□□ -0.32
TNFRSF1A-211ENST00000538363 SPEF2Q9C093 1822 aa13.04□□□□□ -0.32
TNFRSF1A-211ENST00000538363 LRP5O75197 1615 aa13.04□□□□□ -0.32
TNFRSF1A-211ENST00000538363 TRIM6-TRIM34B2RNG4 842 aa13.04□□□□□ -0.32
TNFRSF1A-211ENST00000538363 BBOX1O75936 387 aa13.04□□□□□ -0.32
TNFRSF1A-211ENST00000538363 IFIT1P09914 478 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-211ENST00000538363 ATP2B3Q16720 1220 aa13.04□□□□□ -0.32
TNFRSF1A-211ENST00000538363 TNNI3KQ59H18 835 aa13.04□□□□□ -0.32
TNFRSF1A-211ENST00000538363 CCDC158Q5M9N0 1113 aa13.04□□□□□ -0.32
TNFRSF1A-211ENST00000538363 ATG9AQ7Z3C6 839 aa13.04□□□□□ -0.32
TNFRSF1A-211ENST00000538363 CELF1Q92879 486 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-211ENST00000538363 BSDC1Q9NW68 430 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-211ENST00000538363 FPGT-TNNI3KV9GXZ4 949 aa13.04□□□□□ -0.32
TNFRSF1A-211ENST00000538363 KIAA1551Q9HCM1 1747 aa13.04□□□□□ -0.32
TNFRSF1A-211ENST00000538363 KIF13BQ9NQT8 1826 aa13.04□□□□□ -0.32
TNFRSF1A-211ENST00000538363 PDE4AP27815 886 aa13.03□□□□□ -0.32
TNFRSF1A-211ENST00000538363 TIMM10P62072 90 aa13.03□□□□□ -0.32
TNFRSF1A-211ENST00000538363 CHRNDQ07001 517 aa13.03□□□□□ -0.32
TNFRSF1A-211ENST00000538363 TTC39AQ5SRH9 613 aa13.03□□□□□ -0.32
TNFRSF1A-211ENST00000538363 TMC4Q7Z404 712 aa13.03□□□□□ -0.32
TNFRSF1A-211ENST00000538363 VPS37DQ86XT2 251 aa13.03□□□□□ -0.32
TNFRSF1A-211ENST00000538363 CNKSR1Q969H4 720 aa13.03□□□□□ -0.32
TNFRSF1A-211ENST00000538363 CRAMP1Q96RY5 1269 aa13.03□□□□□ -0.32
TNFRSF1A-211ENST00000538363 GPR108Q9NPR9 543 aa13.03□□□□□ -0.32
TNFRSF1A-211ENST00000538363 ECHDC1Q9NTX5 307 aa13.03□□□□□ -0.32
TNFRSF1A-211ENST00000538363 RIPOR2Q9Y4F9 1068 aa13.03□□□□□ -0.32
TNFRSF1A-211ENST00000538363 A0A1B0GUL7 405 aa13.02□□□□□ -0.33
TNFRSF1A-211ENST00000538363 G3V3G9 751 aa13.02□□□□□ -0.33
TNFRSF1A-211ENST00000538363 PPEF1O14829 653 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF1A-211ENST00000538363 TAF5LO75529 589 aa13.02□□□□□ -0.33
TNFRSF1A-211ENST00000538363 PDE8BO95263 885 aa13.02□□□□□ -0.33
TNFRSF1A-211ENST00000538363 PUM3Q15397 648 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-211ENST00000538363 DCAF8Q5TAQ9 597 aa13.02□□□□□ -0.33
TNFRSF1A-211ENST00000538363 CASC1Q6TDU7 716 aa13.02□□□□□ -0.33
TNFRSF1A-211ENST00000538363 PLEKHM2Q8IWE5 1019 aa13.02□□□□□ -0.33
TNFRSF1A-211ENST00000538363 RILPL2Q969X0 211 aa13.02□□□□□ -0.33
TNFRSF1A-211ENST00000538363 SPON1Q9HCB6 807 aa13.02□□□□□ -0.33
TNFRSF1A-211ENST00000538363 DLEC1Q9Y238 1755 aa13.02□□□□□ -0.33
TNFRSF1A-211ENST00000538363 FRAT2O75474 233 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF1A-211ENST00000538363 SRGNP10124 158 aa13.01□□□□□ -0.33
TNFRSF1A-211ENST00000538363 PDE1AP54750 535 aa13.01□□□□□ -0.33
TNFRSF1A-211ENST00000538363 CAVIN4Q5BKX8 364 aa13.01□□□□□ -0.33
TNFRSF1A-211ENST00000538363 STYK1Q6J9G0 422 aa13.01□□□□□ -0.33
TNFRSF1A-211ENST00000538363 EAF2Q96CJ1 260 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF1A-211ENST00000538363 GNL3LQ9NVN8 582 aaKnown RBP13.01□□□□□ -0.33
TNFRSF1A-211ENST00000538363 MINPP1Q9UNW1 487 aa13.01□□□□□ -0.33
TNFRSF1A-211ENST00000538363 NSFL1CQ9UNZ2 370 aaKnown RBP13.01□□□□□ -0.33
TNFRSF1A-211ENST00000538363 TTC41PQ6P2S7 1318 aa13.01□□□□□ -0.33
TNFRSF1A-211ENST00000538363 RIC1Q4ADV7 1423 aa13.01□□□□□ -0.33
TNFRSF1A-211ENST00000538363 TAF1P21675 1872 aa13□□□□□ -0.33
TNFRSF1A-211ENST00000538363 C6orf229H3BNL8 230 aa13□□□□□ -0.33
TNFRSF1A-211ENST00000538363 GLRX3O76003 335 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-211ENST00000538363 CHRNA5P30532 468 aa13□□□□□ -0.33
TNFRSF1A-211ENST00000538363 HOXA10P31260 410 aaPredicted RBP13□□□□□ -0.33
TNFRSF1A-211ENST00000538363 CRY2Q49AN0 593 aa13□□□□□ -0.33
TNFRSF1A-211ENST00000538363 OTUD7AQ8TE49 926 aaPredicted RBP13□□□□□ -0.33
TNFRSF1A-211ENST00000538363 LPIN2Q92539 896 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms