RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 SCAND2PQ9GZW5 306 aaPredicted RBP16.65■□□□□ 0.26
CLPB-209ENST00000538039 LAMA4Q16363 1823 aa16.65■□□□□ 0.26
CLPB-209ENST00000538039 GUCY1B3Q02153 619 aa16.65■□□□□ 0.26
CLPB-209ENST00000538039 ZNF790Q6PG37 636 aa16.65■□□□□ 0.26
CLPB-209ENST00000538039 FBXW7Q969H0 707 aa16.65■□□□□ 0.26
CLPB-209ENST00000538039 ZNF496Q96IT1 587 aaPredicted RBP16.65■□□□□ 0.26
CLPB-209ENST00000538039 GPHNQ9NQX3 736 aaPredicted RBP16.65■□□□□ 0.26
CLPB-209ENST00000538039 SNW1Q13573 536 aaKnown RBP16.64■□□□□ 0.25
CLPB-209ENST00000538039 UBE3BQ7Z3V4 1068 aa16.64■□□□□ 0.25
CLPB-209ENST00000538039 GOLGA6L4A6NEF3 574 aa16.64■□□□□ 0.25
CLPB-209ENST00000538039 PDCP20941 246 aa16.64■□□□□ 0.25
CLPB-209ENST00000538039 CCT2P78371 535 aaKnown RBP16.64■□□□□ 0.25
CLPB-209ENST00000538039 APOBRQ0VD83 1088 aa16.64■□□□□ 0.25
CLPB-209ENST00000538039 AMOTQ4VCS5 1084 aa16.64■□□□□ 0.25
CLPB-209ENST00000538039 MRC1P22897 1456 aa16.63■□□□□ 0.25
CLPB-209ENST00000538039 HIP1O00291 1037 aa16.63■□□□□ 0.25
CLPB-209ENST00000538039 RNF20Q5VTR2 975 aa16.63■□□□□ 0.25
CLPB-209ENST00000538039 KDM6AO15550 1401 aaPredicted RBP16.63■□□□□ 0.25
CLPB-209ENST00000538039 ATP5JP18859 108 aa16.63■□□□□ 0.25
CLPB-209ENST00000538039 ANKRD1Q15327 319 aa16.63■□□□□ 0.25
CLPB-209ENST00000538039 PDCL2Q8N4E4 241 aa16.63■□□□□ 0.25
CLPB-209ENST00000538039 USP28Q96RU2 1077 aa16.63■□□□□ 0.25
CLPB-209ENST00000538039 CLIP2Q9UDT6 1046 aa16.63■□□□□ 0.25
CLPB-209ENST00000538039 NCAPD2Q15021 1401 aa16.62■□□□□ 0.25
CLPB-209ENST00000538039 HSP90B1P14625 803 aaKnown RBP16.62■□□□□ 0.25
CLPB-209ENST00000538039 ZC3H6P61129 1189 aaKnown RBP16.62■□□□□ 0.25
CLPB-209ENST00000538039 NSUN7Q8NE18 718 aaKnown RBP16.62■□□□□ 0.25
CLPB-209ENST00000538039 METTL22Q9BUU2 404 aaPredicted RBP16.62■□□□□ 0.25
CLPB-209ENST00000538039 DDX19AQ9NUU7 478 aaKnown RBP16.62■□□□□ 0.25
CLPB-209ENST00000538039 GJB4Q9NTQ9 266 aa16.61■□□□□ 0.25
CLPB-209ENST00000538039 ADGRL3Q9HAR2 1447 aa16.61■□□□□ 0.25
CLPB-209ENST00000538039 DMTNQ08495 405 aa16.61■□□□□ 0.25
CLPB-209ENST00000538039 OTUD7BQ6GQQ9 843 aa16.61■□□□□ 0.25
CLPB-209ENST00000538039 KCNH5Q8NCM2 988 aa16.61■□□□□ 0.25
CLPB-209ENST00000538039 SMARCC2Q8TAQ2 1214 aa16.61■□□□□ 0.25
CLPB-209ENST00000538039 COPRSQ9NQ92 184 aa16.61■□□□□ 0.25
CLPB-209ENST00000538039 TNNT1P13805 278 aa16.61■□□□□ 0.25
CLPB-209ENST00000538039 TIMM10P62072 90 aa16.61■□□□□ 0.25
CLPB-209ENST00000538039 TTLL5Q6EMB2 1281 aa16.61■□□□□ 0.25
CLPB-209ENST00000538039 DHX40Q8IX18 779 aaKnown RBP16.61■□□□□ 0.25
CLPB-209ENST00000538039 CCAR1Q8IX12 1150 aaKnown RBP16.6■□□□□ 0.25
CLPB-209ENST00000538039 SYTL4Q96C24 671 aaPredicted RBP16.6■□□□□ 0.25
CLPB-209ENST00000538039 HMG20BQ9P0W2 317 aa16.6■□□□□ 0.25
CLPB-209ENST00000538039 ANKRD13DQ6ZTN6 518 aa16.6■□□□□ 0.25
CLPB-209ENST00000538039 DDX17Q92841 729 aaKnown RBP16.6■□□□□ 0.25
CLPB-209ENST00000538039 GOLGA6L6A8MZA4 724 aa16.59■□□□□ 0.25
CLPB-209ENST00000538039 DDX58O95786 925 aaKnown RBP16.59■□□□□ 0.25
CLPB-209ENST00000538039 H3BQV1 296 aa16.59■□□□□ 0.25
CLPB-209ENST00000538039 CASP7P55210 303 aa16.59■□□□□ 0.25
CLPB-209ENST00000538039 IFFO2Q5TF58 517 aa16.59■□□□□ 0.25
CLPB-209ENST00000538039 LRRC8AQ8IWT6 810 aa16.59■□□□□ 0.25
CLPB-209ENST00000538039 ENGASEQ8NFI3 743 aa16.59■□□□□ 0.25
CLPB-209ENST00000538039 NKX2-3Q8TAU0 364 aa16.59■□□□□ 0.25
CLPB-209ENST00000538039 SLC52A2Q9HAB3 445 aa16.59■□□□□ 0.25
CLPB-209ENST00000538039 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.59■□□□□ 0.25
CLPB-209ENST00000538039 V9GYY5 206 aaPredicted RBP16.59■□□□□ 0.25
CLPB-209ENST00000538039 PTPDC1A2A3K4 754 aa16.59■□□□□ 0.25
CLPB-209ENST00000538039 MCMDC2Q4G0Z9 681 aa16.59■□□□□ 0.25
CLPB-209ENST00000538039 HAUS7Q99871 368 aa16.59■□□□□ 0.25
CLPB-209ENST00000538039 GOLIM4O00461 696 aa16.58■□□□□ 0.24
CLPB-209ENST00000538039 FDPSP14324 419 aaKnown RBP16.58■□□□□ 0.24
CLPB-209ENST00000538039 PALLDQ8WX93 1383 aa16.58■□□□□ 0.24
CLPB-209ENST00000538039 PHRF1Q9P1Y6 1649 aaKnown RBP16.58■□□□□ 0.24
CLPB-209ENST00000538039 PFKFB2O60825 505 aa16.58■□□□□ 0.24
CLPB-209ENST00000538039 EXOSC10Q01780 885 aaKnown RBP16.58■□□□□ 0.24
CLPB-209ENST00000538039 RAB11FIP4Q86YS3 637 aa16.58■□□□□ 0.24
CLPB-209ENST00000538039 ZNF592Q92610 1267 aa16.58■□□□□ 0.24
CLPB-209ENST00000538039 ZNF594Q96JF6 807 aaPredicted RBP16.58■□□□□ 0.24
CLPB-209ENST00000538039 RCOR1Q9UKL0 485 aa16.58■□□□□ 0.24
CLPB-209ENST00000538039 MYH15Q9Y2K3 1946 aa16.58■□□□□ 0.24
CLPB-209ENST00000538039 TPM3P06753 285 aa16.57■□□□□ 0.24
CLPB-209ENST00000538039 LMBR1LQ6UX01 489 aa16.57■□□□□ 0.24
CLPB-209ENST00000538039 ATG9AQ7Z3C6 839 aa16.57■□□□□ 0.24
CLPB-209ENST00000538039 A0A087WZG4 1122 aa16.57■□□□□ 0.24
CLPB-209ENST00000538039 RABL6Q3YEC7 729 aaPredicted RBP16.57■□□□□ 0.24
CLPB-209ENST00000538039 TRMT1Q9NXH9 659 aaKnown RBP16.57■□□□□ 0.24
CLPB-209ENST00000538039 FER1L4A9Z1Z3 1794 aa16.57■□□□□ 0.24
CLPB-209ENST00000538039 NBPF11Q86T75 865 aa16.56■□□□□ 0.24
CLPB-209ENST00000538039 ADAMTS7Q9UKP4 1686 aa16.56■□□□□ 0.24
CLPB-209ENST00000538039 FOXP2O15409 715 aa16.56■□□□□ 0.24
CLPB-209ENST00000538039 NEXNQ0ZGT2 675 aa16.56■□□□□ 0.24
CLPB-209ENST00000538039 FILIP1Q7Z7B0 1213 aa16.56■□□□□ 0.24
CLPB-209ENST00000538039 ERBB3P21860 1342 aa16.56■□□□□ 0.24
CLPB-209ENST00000538039 NEDD4P46934 1319 aa16.56■□□□□ 0.24
CLPB-209ENST00000538039 SALL1Q9NSC2 1324 aa16.56■□□□□ 0.24
CLPB-209ENST00000538039 CCZ1BP86790 482 aa16.56■□□□□ 0.24
CLPB-209ENST00000538039 CCZ1P86791 482 aaPredicted RBP16.56■□□□□ 0.24
CLPB-209ENST00000538039 FOXO4P98177 505 aa16.56■□□□□ 0.24
CLPB-209ENST00000538039 TPD52L1Q16890 204 aaPredicted RBP16.56■□□□□ 0.24
CLPB-209ENST00000538039 LRRC24Q50LG9 513 aa16.56■□□□□ 0.24
CLPB-209ENST00000538039 KLHL34Q8N239 644 aa16.56■□□□□ 0.24
CLPB-209ENST00000538039 NAP1L2Q9ULW6 460 aaPredicted RBP16.56■□□□□ 0.24
CLPB-209ENST00000538039 NEUROD6Q96NK8 337 aa16.55■□□□□ 0.24
CLPB-209ENST00000538039 AFDNP55196 1824 aaKnown RBP16.55■□□□□ 0.24
CLPB-209ENST00000538039 A0A1B0GVL5 298 aa16.55■□□□□ 0.24
CLPB-209ENST00000538039 PHKG2P15735 406 aa16.55■□□□□ 0.24
CLPB-209ENST00000538039 CHAF1AQ13111 956 aaPredicted RBP16.55■□□□□ 0.24
CLPB-209ENST00000538039 KBTBD3Q8NAB2 608 aa16.55■□□□□ 0.24
CLPB-209ENST00000538039 LRRN4CLQ8ND94 238 aa16.55■□□□□ 0.24
CLPB-209ENST00000538039 CHMP4AQ9BY43 222 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms