RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 PRC1O43663 620 aa13.18□□□□□ -0.3
TNC-211ENST00000537320 HSP90B2PQ58FF3 399 aa13.18□□□□□ -0.3
TNC-211ENST00000537320 PLEKHF1Q96S99 279 aa13.18□□□□□ -0.3
TNC-211ENST00000537320 A0A1B0GUL7 405 aa13.18□□□□□ -0.3
TNC-211ENST00000537320 MIGA1Q8NAN2 632 aa13.18□□□□□ -0.3
TNC-211ENST00000537320 HCLS1P14317 486 aaPredicted RBP13.17□□□□□ -0.3
TNC-211ENST00000537320 ZSCAN30Q86W11 494 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 TMTC2Q8N394 836 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 MAGEB6Q8N7X4 407 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 CCDC112Q8NEF3 446 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 DBNDD2Q9BQY9 259 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 ALG1Q9BT22 464 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 RAB34Q9BZG1 259 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 GCKRQ14397 625 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 TNNI3KQ59H18 835 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 IFIT1BQ5T764 474 aaKnown RBP13.17□□□□□ -0.3
TNC-211ENST00000537320 ZNF771Q7L3S4 317 aaPredicted RBP13.17□□□□□ -0.3
TNC-211ENST00000537320 CNPY2Q9Y2B0 182 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 FPGT-TNNI3KV9GXZ4 949 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 ITGA6P23229 1130 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 CCDC12Q8WUD4 166 aaPredicted RBP13.17□□□□□ -0.3
TNC-211ENST00000537320 ZNF594Q96JF6 807 aaPredicted RBP13.17□□□□□ -0.3
TNC-211ENST00000537320 PDCL3Q9H2J4 239 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 SH3TC1Q8TE82 1336 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 MAGEB6P1A0A0J9YX57 407 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 TMEM266Q2M3C6 531 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 TFCP2L1Q9NZI6 479 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 CCDC171Q6TFL3 1326 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 RAD50Q92878 1312 aa13.17□□□□□ -0.3
TNC-211ENST00000537320 TSPY3P0CV98 308 aa13.16□□□□□ -0.3
TNC-211ENST00000537320 TSPY8P0CW00 308 aa13.16□□□□□ -0.3
TNC-211ENST00000537320 RTN1Q16799 776 aa13.16□□□□□ -0.3
TNC-211ENST00000537320 AATKQ6ZMQ8 1374 aa13.16□□□□□ -0.3
TNC-211ENST00000537320 SFPQP23246 707 aaKnown RBP eCLIP13.16□□□□□ -0.3
TNC-211ENST00000537320 RBM25P49756 843 aaKnown RBP13.16□□□□□ -0.3
TNC-211ENST00000537320 ZNF804AQ7Z570 1209 aa13.16□□□□□ -0.3
TNC-211ENST00000537320 MAP7D2Q96T17 732 aa13.16□□□□□ -0.3
TNC-211ENST00000537320 NLRP1Q9C000 1473 aa13.16□□□□□ -0.3
TNC-211ENST00000537320 SYNMO15061 1565 aa13.16□□□□□ -0.3
TNC-211ENST00000537320 GIGYF1O75420 1035 aaPredicted RBP13.16□□□□□ -0.3
TNC-211ENST00000537320 SETQ01105 290 aaPredicted RBP13.16□□□□□ -0.3
TNC-211ENST00000537320 CDC42BPAQ5VT25 1732 aa13.16□□□□□ -0.3
TNC-211ENST00000537320 CUL5Q93034 780 aa13.16□□□□□ -0.3
TNC-211ENST00000537320 CABP5Q9NP86 173 aa13.16□□□□□ -0.3
TNC-211ENST00000537320 TMEM94Q12767 1356 aa13.15□□□□□ -0.3
TNC-211ENST00000537320 KIF1BO60333 1816 aa13.15□□□□□ -0.3
TNC-211ENST00000537320 PHKG2P15735 406 aa13.15□□□□□ -0.3
TNC-211ENST00000537320 F13A1P00488 732 aa13.15□□□□□ -0.3
TNC-211ENST00000537320 CPA1P15085 419 aa13.15□□□□□ -0.3
TNC-211ENST00000537320 PARP10Q53GL7 1025 aa13.15□□□□□ -0.3
TNC-211ENST00000537320 CNKSR2Q8WXI2 1034 aa13.15□□□□□ -0.3
TNC-211ENST00000537320 FEZ1Q99689 392 aa13.15□□□□□ -0.3
TNC-211ENST00000537320 ABCC4O15439 1325 aa13.15□□□□□ -0.3
TNC-211ENST00000537320 PRR36Q9H6K5 1346 aa13.15□□□□□ -0.3
TNC-211ENST00000537320 APOBRQ0VD83 1088 aa13.15□□□□□ -0.3
TNC-211ENST00000537320 TNIP1Q15025 636 aa13.15□□□□□ -0.3
TNC-211ENST00000537320 FAM98CQ17RN3 349 aaKnown RBP13.15□□□□□ -0.3
TNC-211ENST00000537320 GIMAP6Q6P9H5 292 aa13.15□□□□□ -0.3
TNC-211ENST00000537320 USP48Q86UV5 1035 aa13.15□□□□□ -0.3
TNC-211ENST00000537320 CCNL1Q9UK58 526 aaPredicted RBP13.15□□□□□ -0.3
TNC-211ENST00000537320 EPB41L2O43491 1005 aaKnown RBP13.14□□□□□ -0.31
TNC-211ENST00000537320 GNAT2P19087 354 aa13.14□□□□□ -0.31
TNC-211ENST00000537320 ZNF165P49910 485 aa13.14□□□□□ -0.31
TNC-211ENST00000537320 ZSCAN23Q3MJ62 389 aa13.14□□□□□ -0.31
TNC-211ENST00000537320 TRAPPC3LQ5T215 181 aa13.14□□□□□ -0.31
TNC-211ENST00000537320 RUFY3Q7L099 469 aa13.14□□□□□ -0.31
TNC-211ENST00000537320 DHX32Q7L7V1 743 aaKnown RBP13.14□□□□□ -0.31
TNC-211ENST00000537320 JAG2Q9Y219 1238 aa13.14□□□□□ -0.31
TNC-211ENST00000537320 ATP7BP35670 1465 aa13.14□□□□□ -0.31
TNC-211ENST00000537320 ABCC3O15438 1527 aa13.14□□□□□ -0.31
TNC-211ENST00000537320 DNM1Q05193 864 aaKnown RBP13.14□□□□□ -0.31
TNC-211ENST00000537320 ZC3H12CQ9C0D7 883 aaKnown RBP13.14□□□□□ -0.31
TNC-211ENST00000537320 PICALMQ13492 652 aa13.14□□□□□ -0.31
TNC-211ENST00000537320 ISM2Q6H9L7 571 aa13.14□□□□□ -0.31
TNC-211ENST00000537320 TCP11L1Q9NUJ3 509 aa13.14□□□□□ -0.31
TNC-211ENST00000537320 CLIP2Q9UDT6 1046 aa13.14□□□□□ -0.31
TNC-211ENST00000537320 PDE8AO60658 829 aa13.14□□□□□ -0.31
TNC-211ENST00000537320 STX1AQ16623 288 aa13.14□□□□□ -0.31
TNC-211ENST00000537320 CCDC129Q6ZRS4 1044 aa13.14□□□□□ -0.31
TNC-211ENST00000537320 SHROOM2Q13796 1616 aa13.13□□□□□ -0.31
TNC-211ENST00000537320 UBA7P41226 1012 aa13.13□□□□□ -0.31
TNC-211ENST00000537320 CCDC102BQ68D86 513 aa13.13□□□□□ -0.31
TNC-211ENST00000537320 ANKRD2Q9GZV1 360 aa13.13□□□□□ -0.31
TNC-211ENST00000537320 USP44Q9H0E7 712 aa13.13□□□□□ -0.31
TNC-211ENST00000537320 ERVV-2B6SEH9 535 aa13.13□□□□□ -0.31
TNC-211ENST00000537320 XAGE2Q96GT9 111 aa13.13□□□□□ -0.31
TNC-211ENST00000537320 HELLSQ9NRZ9 838 aa13.13□□□□□ -0.31
TNC-211ENST00000537320 MCM9Q9NXL9 1143 aa13.13□□□□□ -0.31
TNC-211ENST00000537320 TOP1P11387 765 aaKnown RBP13.13□□□□□ -0.31
TNC-211ENST00000537320 PKNOX2Q96KN3 472 aa13.13□□□□□ -0.31
TNC-211ENST00000537320 CCDC87Q9NVE4 849 aa13.13□□□□□ -0.31
TNC-211ENST00000537320 USP6P35125 1406 aa13.12□□□□□ -0.31
TNC-211ENST00000537320 RBM10P98175 930 aaKnown RBP13.12□□□□□ -0.31
TNC-211ENST00000537320 UBA5Q9GZZ9 404 aa13.12□□□□□ -0.31
TNC-211ENST00000537320 NEURL1BA8MQ27 555 aa13.12□□□□□ -0.31
TNC-211ENST00000537320 ARHGAP29Q52LW3 1261 aa13.12□□□□□ -0.31
TNC-211ENST00000537320 FAM227BQ96M60 508 aa13.12□□□□□ -0.31
TNC-211ENST00000537320 SEPT11Q9NVA2 429 aaKnown RBP13.12□□□□□ -0.31
TNC-211ENST00000537320 AOX1Q06278 1338 aa13.12□□□□□ -0.31
TNC-211ENST00000537320 TET3O43151 1660 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms