RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 CACNA1FO60840 1977 aa15.73■□□□□ 0.11
HDAC4-214ENST00000535493 LRRC37A3O60309 1634 aa15.73■□□□□ 0.11
HDAC4-214ENST00000535493 ALDH1L1O75891 902 aa15.73■□□□□ 0.11
HDAC4-214ENST00000535493 FBXO38Q6PIJ6 1188 aa15.73■□□□□ 0.11
HDAC4-214ENST00000535493 DHX40Q8IX18 779 aaKnown RBP15.73■□□□□ 0.11
HDAC4-214ENST00000535493 LINS1Q8NG48 757 aa15.73■□□□□ 0.11
HDAC4-214ENST00000535493 MYD88Q99836 296 aa15.73■□□□□ 0.11
HDAC4-214ENST00000535493 DBNDD2Q9BQY9 259 aa15.73■□□□□ 0.11
HDAC4-214ENST00000535493 GJB4Q9NTQ9 266 aa15.73■□□□□ 0.11
HDAC4-214ENST00000535493 RNMTO43148 476 aaKnown RBP15.73■□□□□ 0.11
HDAC4-214ENST00000535493 CTDNEP1O95476 244 aa15.73■□□□□ 0.11
HDAC4-214ENST00000535493 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.73■□□□□ 0.11
HDAC4-214ENST00000535493 GPHNQ9NQX3 736 aaPredicted RBP15.73■□□□□ 0.11
HDAC4-214ENST00000535493 CCZ1BP86790 482 aa15.72■□□□□ 0.11
HDAC4-214ENST00000535493 CCZ1P86791 482 aaPredicted RBP15.72■□□□□ 0.11
HDAC4-214ENST00000535493 C1orf141Q5JVX7 400 aa15.72■□□□□ 0.11
HDAC4-214ENST00000535493 FSIP1Q8NA03 581 aa15.72■□□□□ 0.11
HDAC4-214ENST00000535493 TOPAZ1Q8N9V7 1692 aa15.72■□□□□ 0.11
HDAC4-214ENST00000535493 ERICH4A6NGS2 130 aa15.72■□□□□ 0.11
HDAC4-214ENST00000535493 ATP5J2-PTCD1G3V325 749 aa15.72■□□□□ 0.11
HDAC4-214ENST00000535493 PTCD1O75127 700 aaKnown RBP15.72■□□□□ 0.11
HDAC4-214ENST00000535493 IP6K1Q92551 441 aa15.72■□□□□ 0.11
HDAC4-214ENST00000535493 CFAP45Q9UL16 551 aa15.72■□□□□ 0.11
HDAC4-214ENST00000535493 PTPDC1A2A3K4 754 aa15.71■□□□□ 0.11
HDAC4-214ENST00000535493 KINO60870 393 aaKnown RBP15.71■□□□□ 0.11
HDAC4-214ENST00000535493 AKAP4Q5JQC9 854 aa15.71■□□□□ 0.11
HDAC4-214ENST00000535493 POLR3DP05423 398 aaPredicted RBP15.71■□□□□ 0.11
HDAC4-214ENST00000535493 STX1AQ16623 288 aa15.71■□□□□ 0.11
HDAC4-214ENST00000535493 GORABQ5T7V8 394 aa15.71■□□□□ 0.11
HDAC4-214ENST00000535493 NSUN7Q8NE18 718 aaKnown RBP15.71■□□□□ 0.11
HDAC4-214ENST00000535493 SDF4Q9BRK5 362 aa15.71■□□□□ 0.11
HDAC4-214ENST00000535493 DIP2BQ9P265 1576 aa15.7■□□□□ 0.1
HDAC4-214ENST00000535493 HOXB7P09629 217 aa15.7■□□□□ 0.1
HDAC4-214ENST00000535493 SLFN14P0C7P3 912 aa15.7■□□□□ 0.1
HDAC4-214ENST00000535493 CCDC73Q6ZRK6 1079 aa15.7■□□□□ 0.1
HDAC4-214ENST00000535493 COPS6Q7L5N1 327 aa15.7■□□□□ 0.1
HDAC4-214ENST00000535493 ERCC6LQ2NKX8 1250 aa15.7■□□□□ 0.1
HDAC4-214ENST00000535493 NYAP1Q6ZVC0 841 aa15.7■□□□□ 0.1
HDAC4-214ENST00000535493 XAGE3Q8WTP9 111 aa15.7■□□□□ 0.1
HDAC4-214ENST00000535493 ZBTB9Q96C00 473 aa15.7■□□□□ 0.1
HDAC4-214ENST00000535493 ZNF609O15014 1411 aa15.69■□□□□ 0.1
HDAC4-214ENST00000535493 RBM6P78332 1123 aaKnown RBP15.69■□□□□ 0.1
HDAC4-214ENST00000535493 PDIA6Q15084 440 aa15.69■□□□□ 0.1
HDAC4-214ENST00000535493 UBE3BQ7Z3V4 1068 aa15.69■□□□□ 0.1
HDAC4-214ENST00000535493 ILDR1Q86SU0 546 aaPredicted RBP15.69■□□□□ 0.1
HDAC4-214ENST00000535493 CCAR2Q8N163 923 aaKnown RBP15.69■□□□□ 0.1
HDAC4-214ENST00000535493 NEUROD6Q96NK8 337 aa15.69■□□□□ 0.1
HDAC4-214ENST00000535493 HMG20BQ9P0W2 317 aa15.69■□□□□ 0.1
HDAC4-214ENST00000535493 PLEKHG1Q9ULL1 1385 aa15.69■□□□□ 0.1
HDAC4-214ENST00000535493 SMC2O95347 1197 aa15.69■□□□□ 0.1
HDAC4-214ENST00000535493 DPCR1Q3MIW9 517 aa15.69■□□□□ 0.1
HDAC4-214ENST00000535493 PLEKHO1Q53GL0 409 aaPredicted RBP15.69■□□□□ 0.1
HDAC4-214ENST00000535493 NBPF11Q86T75 865 aa15.69■□□□□ 0.1
HDAC4-214ENST00000535493 CRYBG1Q9Y4K1 1723 aa15.69■□□□□ 0.1
HDAC4-214ENST00000535493 AGLP35573 1532 aa15.69■□□□□ 0.1
HDAC4-214ENST00000535493 TNNI3KQ59H18 835 aa15.68■□□□□ 0.1
HDAC4-214ENST00000535493 TTLL5Q6EMB2 1281 aa15.68■□□□□ 0.1
HDAC4-214ENST00000535493 SYT10Q6XYQ8 523 aa15.68■□□□□ 0.1
HDAC4-214ENST00000535493 MRFAP1L1Q96HT8 127 aa15.68■□□□□ 0.1
HDAC4-214ENST00000535493 FPGT-TNNI3KV9GXZ4 949 aa15.68■□□□□ 0.1
HDAC4-214ENST00000535493 PXDNQ92626 1479 aa15.68■□□□□ 0.1
HDAC4-214ENST00000535493 NEURL1BA8MQ27 555 aa15.68■□□□□ 0.1
HDAC4-214ENST00000535493 GOLIM4O00461 696 aa15.68■□□□□ 0.1
HDAC4-214ENST00000535493 GOLGA8FQ08AF8 430 aa15.68■□□□□ 0.1
HDAC4-214ENST00000535493 GOLGA8DPQ0D2H9 430 aa15.68■□□□□ 0.1
HDAC4-214ENST00000535493 USPL1Q5W0Q7 1092 aa15.68■□□□□ 0.1
HDAC4-214ENST00000535493 ZSCAN16Q9H4T2 348 aaPredicted RBP15.68■□□□□ 0.1
HDAC4-214ENST00000535493 SNRKQ9NRH2 765 aa15.68■□□□□ 0.1
HDAC4-214ENST00000535493 RCOR1Q9UKL0 485 aa15.68■□□□□ 0.1
HDAC4-214ENST00000535493 ERBB3P21860 1342 aa15.68■□□□□ 0.1
HDAC4-214ENST00000535493 NDUFA8P51970 172 aa15.67■□□□□ 0.1
HDAC4-214ENST00000535493 TIMM10P62072 90 aa15.67■□□□□ 0.1
HDAC4-214ENST00000535493 PSME1Q06323 249 aa15.67■□□□□ 0.1
HDAC4-214ENST00000535493 GCKRQ14397 625 aa15.67■□□□□ 0.1
HDAC4-214ENST00000535493 TMC6Q7Z403 805 aa15.67■□□□□ 0.1
HDAC4-214ENST00000535493 ZNF446Q9NWS9 450 aa15.67■□□□□ 0.1
HDAC4-214ENST00000535493 PCDHA7Q9UN72 937 aa15.67■□□□□ 0.1
HDAC4-214ENST00000535493 PTPN12Q05209 780 aaKnown RBP15.67■□□□□ 0.1
HDAC4-214ENST00000535493 TSGA10IPQ3SY00 556 aa15.67■□□□□ 0.1
HDAC4-214ENST00000535493 MCMDC2Q4G0Z9 681 aa15.67■□□□□ 0.1
HDAC4-214ENST00000535493 ESCO1Q5FWF5 840 aa15.67■□□□□ 0.1
HDAC4-214ENST00000535493 ENGASEQ8NFI3 743 aa15.67■□□□□ 0.1
HDAC4-214ENST00000535493 XPO4Q9C0E2 1151 aaKnown RBP15.67■□□□□ 0.1
HDAC4-214ENST00000535493 IFNKQ9P0W0 207 aa15.67■□□□□ 0.1
HDAC4-214ENST00000535493 MORC2Q9Y6X9 1032 aaPredicted RBP15.67■□□□□ 0.1
HDAC4-214ENST00000535493 DDX58O95786 925 aaKnown RBP15.67■□□□□ 0.1
HDAC4-214ENST00000535493 HAND2P61296 217 aa15.67■□□□□ 0.1
HDAC4-214ENST00000535493 KRT32Q14532 448 aa15.67■□□□□ 0.1
HDAC4-214ENST00000535493 E4F1Q66K89 784 aaPredicted RBP15.67■□□□□ 0.1
HDAC4-214ENST00000535493 SARM1Q6SZW1 724 aa15.67■□□□□ 0.1
HDAC4-214ENST00000535493 PHF8Q9UPP1 1060 aa15.67■□□□□ 0.1
HDAC4-214ENST00000535493 CLIC4Q9Y696 253 aa15.67■□□□□ 0.1
HDAC4-214ENST00000535493 CDC25BP30305 580 aa15.66■□□□□ 0.1
HDAC4-214ENST00000535493 FAM160A1Q05DH4 1040 aa15.66■□□□□ 0.1
HDAC4-214ENST00000535493 SMARCC2Q8TAQ2 1214 aa15.66■□□□□ 0.1
HDAC4-214ENST00000535493 DDX21Q9NR30 783 aaKnown RBP eCLIP15.66■□□□□ 0.1
HDAC4-214ENST00000535493 AXIN2Q9Y2T1 843 aa15.66■□□□□ 0.1
HDAC4-214ENST00000535493 TERF2Q15554 542 aa15.66■□□□□ 0.1
HDAC4-214ENST00000535493 HSP90AA4PQ58FG1 418 aa15.66■□□□□ 0.1
HDAC4-214ENST00000535493 CEP57L1Q8IYX8 460 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms