RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 SH3BP5O60239 455 aa14.43□□□□□ -0.1
SPG11-203ENST00000535302 ATXN8OSP0DMR3 200 aa14.43□□□□□ -0.1
SPG11-203ENST00000535302 IRX5P78411 483 aaPredicted RBP14.43□□□□□ -0.1
SPG11-203ENST00000535302 ALG1Q9BT22 464 aa14.43□□□□□ -0.1
SPG11-203ENST00000535302 KRT13P13646 458 aa14.42□□□□□ -0.1
SPG11-203ENST00000535302 HCLS1P14317 486 aaPredicted RBP14.42□□□□□ -0.1
SPG11-203ENST00000535302 SF3A3Q12874 501 aaKnown RBP eCLIP14.42□□□□□ -0.13e-6■□□□□ 9.9
SPG11-203ENST00000535302 ZWINTO95229 277 aa14.42□□□□□ -0.1
SPG11-203ENST00000535302 FGFR1OPO95684 399 aaKnown RBP14.42□□□□□ -0.1
SPG11-203ENST00000535302 CALM1P0DP23 149 aa14.42□□□□□ -0.1
SPG11-203ENST00000535302 CALM2P0DP24 149 aa14.42□□□□□ -0.1
SPG11-203ENST00000535302 CALM3P0DP25 149 aa14.42□□□□□ -0.1
SPG11-203ENST00000535302 EXOC1Q9NV70 894 aa14.42□□□□□ -0.1
SPG11-203ENST00000535302 PHACTR2O75167 634 aa14.42□□□□□ -0.1
SPG11-203ENST00000535302 SCAF11Q99590 1463 aaKnown RBP14.42□□□□□ -0.1
SPG11-203ENST00000535302 GSTA5Q7RTV2 222 aa14.42□□□□□ -0.1
SPG11-203ENST00000535302 CCDC12Q8WUD4 166 aaPredicted RBP14.42□□□□□ -0.1
SPG11-203ENST00000535302 SIRT1Q96EB6 747 aa14.42□□□□□ -0.1
SPG11-203ENST00000535302 UIMC1Q96RL1 719 aa14.42□□□□□ -0.1
SPG11-203ENST00000535302 RBM8AQ9Y5S9 174 aaKnown RBP14.42□□□□□ -0.1
SPG11-203ENST00000535302 NCKAP5LQ9HCH0 1330 aa14.42□□□□□ -0.1
SPG11-203ENST00000535302 NMIQ13287 307 aaPredicted RBP14.42□□□□□ -0.1
SPG11-203ENST00000535302 ZSCAN23Q3MJ62 389 aa14.42□□□□□ -0.1
SPG11-203ENST00000535302 SLC9C2Q5TAH2 1124 aa14.42□□□□□ -0.1
SPG11-203ENST00000535302 CAPZA3Q96KX2 299 aa14.42□□□□□ -0.1
SPG11-203ENST00000535302 MCM5P33992 734 aa14.41□□□□□ -0.1
SPG11-203ENST00000535302 FBF1Q8TES7 1133 aa14.41□□□□□ -0.1
SPG11-203ENST00000535302 MRRFQ96E11 262 aaKnown RBP14.41□□□□□ -0.1
SPG11-203ENST00000535302 C14orf93Q9H972 538 aaKnown RBP14.41□□□□□ -0.1
SPG11-203ENST00000535302 NFATC2IPQ8NCF5 419 aa14.41□□□□□ -0.1
SPG11-203ENST00000535302 WDHD1O75717 1129 aaPredicted RBP14.41□□□□□ -0.1
SPG11-203ENST00000535302 ZMYND15Q9H091 742 aa14.41□□□□□ -0.1
SPG11-203ENST00000535302 EEF2P13639 858 aaKnown RBP14.41□□□□□ -0.1
SPG11-203ENST00000535302 RAB3IL1Q8TBN0 382 aa14.41□□□□□ -0.1
SPG11-203ENST00000535302 PLEKHH1Q9ULM0 1364 aa14.41□□□□□ -0.1
SPG11-203ENST00000535302 LDHCP07864 332 aa14.41□□□□□ -0.1
SPG11-203ENST00000535302 ZKSCAN3Q9BRR0 538 aa14.41□□□□□ -0.1
SPG11-203ENST00000535302 ZNF165P49910 485 aa14.41□□□□□ -0.1
SPG11-203ENST00000535302 PPIP5K1Q6PFW1 1433 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 SELENOSQ9BQE4 189 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 PCDHB15Q9Y5E8 787 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 TBCAO75347 108 aaKnown RBP14.4□□□□□ -0.1
SPG11-203ENST00000535302 AMPD3Q01432 767 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 NUCB1Q02818 461 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 CCDC6Q16204 474 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 DDX19AQ9NUU7 478 aaKnown RBP14.4□□□□□ -0.1
SPG11-203ENST00000535302 ZBTB43O43298 467 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 STAT6P42226 847 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 MTHFSDQ2M296 383 aaKnown RBP14.4□□□□□ -0.1
SPG11-203ENST00000535302 ALS2CR12Q96Q35 445 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 TAOK3Q9H2K8 898 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 GBP3Q9H0R5 595 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 UBAP1LF5GYI3 381 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 DTNBO60941 627 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 SYKP43405 635 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 ANO6Q4KMQ2 910 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 GPIHBP1Q8IV16 184 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 TEX13AQ9BXU3 409 aaPredicted RBP14.4□□□□□ -0.1
SPG11-203ENST00000535302 FANCAO15360 1455 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 CTAGE5O15320 804 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 CCDC102BQ68D86 513 aa14.4□□□□□ -0.1
SPG11-203ENST00000535302 CCDC50Q8IVM0 306 aa14.39□□□□□ -0.11
SPG11-203ENST00000535302 N4BP3O15049 544 aa14.39□□□□□ -0.11
SPG11-203ENST00000535302 NAA16Q6N069 864 aaPredicted RBP14.39□□□□□ -0.11
SPG11-203ENST00000535302 TSPYL6Q8N831 410 aa14.39□□□□□ -0.11
SPG11-203ENST00000535302 SNW1Q13573 536 aaKnown RBP14.39□□□□□ -0.11
SPG11-203ENST00000535302 USP48Q86UV5 1035 aa14.39□□□□□ -0.11
SPG11-203ENST00000535302 MAGEB6Q8N7X4 407 aa14.39□□□□□ -0.11
SPG11-203ENST00000535302 PKD2L1Q9P0L9 805 aa14.39□□□□□ -0.11
SPG11-203ENST00000535302 PPP2R5CQ13362 524 aa14.39□□□□□ -0.11
SPG11-203ENST00000535302 RTN1Q16799 776 aa14.39□□□□□ -0.11
SPG11-203ENST00000535302 BMP2KLQ5H9B9 411 aa14.39□□□□□ -0.11
SPG11-203ENST00000535302 EIF4A2Q14240 407 aaKnown RBP14.39□□□□□ -0.11
SPG11-203ENST00000535302 ZSCAN22P10073 491 aaPredicted RBP14.39□□□□□ -0.11
SPG11-203ENST00000535302 NAPAP54920 295 aa14.39□□□□□ -0.11
SPG11-203ENST00000535302 CCDC174Q6PII3 467 aa14.39□□□□□ -0.11
SPG11-203ENST00000535302 CCDC25Q86WR0 208 aa14.39□□□□□ -0.11
SPG11-203ENST00000535302 DHX58Q96C10 678 aa14.39□□□□□ -0.11
SPG11-203ENST00000535302 SAP30BPQ9UHR5 308 aaKnown RBP14.39□□□□□ -0.11
SPG11-203ENST00000535302 NDC80O14777 642 aa14.38□□□□□ -0.11
SPG11-203ENST00000535302 HSF2BPO75031 334 aa14.38□□□□□ -0.11
SPG11-203ENST00000535302 GNG11P61952 73 aa14.38□□□□□ -0.11
SPG11-203ENST00000535302 DZIP3Q86Y13 1208 aaKnown RBP14.38□□□□□ -0.11
SPG11-203ENST00000535302 HGSO14964 777 aaPredicted RBP14.38□□□□□ -0.11
SPG11-203ENST00000535302 ERCC5P28715 1186 aaPredicted RBP14.38□□□□□ -0.11
SPG11-203ENST00000535302 APOBRQ0VD83 1088 aa14.38□□□□□ -0.11
SPG11-203ENST00000535302 TFCP2Q12800 502 aa14.38□□□□□ -0.11
SPG11-203ENST00000535302 MCM6Q14566 821 aa14.38□□□□□ -0.11
SPG11-203ENST00000535302 NCOA1Q15788 1441 aa14.38□□□□□ -0.11
SPG11-203ENST00000535302 MRPL50Q8N5N7 158 aaKnown RBP14.38□□□□□ -0.11
SPG11-203ENST00000535302 UQCRFS1P1P0C7P4 283 aa14.38□□□□□ -0.11
SPG11-203ENST00000535302 PDE1AP54750 535 aa14.38□□□□□ -0.11
SPG11-203ENST00000535302 DNM1Q05193 864 aaKnown RBP14.38□□□□□ -0.11
SPG11-203ENST00000535302 CEP135Q66GS9 1140 aa14.38□□□□□ -0.11
SPG11-203ENST00000535302 GIGYF2Q6Y7W6 1299 aaKnown RBP14.38□□□□□ -0.11
SPG11-203ENST00000535302 MAGEB6P1A0A0J9YX57 407 aa14.37□□□□□ -0.11
SPG11-203ENST00000535302 GSTO1P78417 241 aa14.37□□□□□ -0.11
SPG11-203ENST00000535302 GRM8O00222 908 aa14.37□□□□□ -0.11
SPG11-203ENST00000535302 IGSF3O75054 1194 aa14.37□□□□□ -0.11
SPG11-203ENST00000535302 SPATA24Q86W54 205 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 206.2 ms